Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g15737 Nelumbo nucifera HOM05D000797 ORTHO05D275467 2.5e-92 342.0 166 100.0
Nn7g36308 Nelumbo nucifera HOM05D000797 ORTHO05D278105 4.2e-31 138.7 82 84.1
Nn6g35540 Nelumbo nucifera HOM05D000797 ORTHO05D004867 3.6e-14 82.4 51 80.4
Aqoxy7G01150 Aquilegia oxysepala HOM05D000797 ORTHO05D004867 8.2e-11 71.2 51 70.6
TAR626G1502 Trochodendron aralioides HOM05D000797 ORTHO05D004867 3.1e-10 69.3 51 64.7
TAR383G0108 Trochodendron aralioides HOM05D000797 ORTHO05D004867 3.4e-09 65.9 51 64.7
Gohir.A06G192500 Gossypium hirsutum HOM05D000797 ORTHO05D004867 5.0e-08 62.0 51 62.7
Gohir.D06G200400 Gossypium hirsutum HOM05D000797 ORTHO05D004867 5.0e-08 62.0 51 62.7
Gorai.010G233900 Gossypium raimondii HOM05D000797 ORTHO05D004867 5.0e-08 62.0 51 62.7
Gohir.A05G136800 Gossypium hirsutum HOM05D000797 ORTHO05D004867 8.5e-08 61.2 51 60.8
Manes.11G023600 Manihot esculenta HOM05D000797 ORTHO05D004867 1.9e-07 60.1 51 60.8
GSVIVG01016812001 Vitis vinifera HOM05D000797 ORTHO05D004867 1.9e-07 60.1 51 62.7
Cfa003559 Carpinus fangiana HOM05D000797 ORTHO05D004867 2.5e-07 59.7 51 58.8
Dinv37677 Davidia involucrata HOM05D000797 ORTHO05D004867 3.2e-07 59.3 51 58.8
FvH4_6g34140 Fragaria vesca HOM05D000797 ORTHO05D004867 3.2e-07 59.3 51 60.8
FAN02G2754 Fragaria x ananassa HOM05D000797 ORTHO05D004867 3.2e-07 59.3 51 60.8
FAN05G5421 Fragaria x ananassa HOM05D000797 ORTHO05D004867 3.2e-07 59.3 51 60.8
FAN14G2786 Fragaria x ananassa HOM05D000797 ORTHO05D004867 3.2e-07 59.3 51 60.8
COL.COLO4_30700 Corchorus olitorius HOM05D000797 ORTHO05D004867 4.2e-07 58.9 51 60.8
Duzib192G0315 Durio zibethinus HOM05D000797 ORTHO05D004867 5.5e-07 58.5 51 58.8
Sabra03G0022400 Salix brachista HOM05D000797 ORTHO05D004867 5.5e-07 58.5 51 58.8
Duzib235G0059 Durio zibethinus HOM05D000797 ORTHO05D004867 7.2e-07 58.2 51 58.8
Gohir.D05G138800 Gossypium hirsutum HOM05D000797 ORTHO05D004867 7.2e-07 58.2 51 58.8
ATR0127G012 Amborella trichopoda HOM05D000797 ORTHO05D004867 9.4e-07 57.8 41 65.9
Haze_15989 Corylus avellana HOM05D000797 ORTHO05D004867 9.4e-07 57.8 51 56.9
MBI01_g16593_MAGBIO Magnolia biondii HOM05D002706 ORTHO05D003253 9.4e-07 57.8 51 66.7
MBI07_g31504_MAGBIO Magnolia biondii HOM05D000797 ORTHO05D004867 9.4e-07 57.8 51 66.7
RcHm_v2.0_Chr2g0144451 Rosa chinensis HOM05D000797 ORTHO05D004867 9.4e-07 57.8 51 58.8
Atru.chr1.3800 Acer truncatum HOM05D000797 ORTHO05D004867 1.2e-06 57.4 51 58.8
CiPaw.02G138200 Carya illinoinensis HOM05D000797 ORTHO05D004867 1.2e-06 57.4 51 56.9
Dinv01118 Davidia involucrata HOM05D000797 ORTHO05D004867 1.2e-06 57.4 51 58.8
PSO170G2583 Papaver somniferum HOM05D000797 ORTHO05D004867 1.2e-06 57.4 51 58.8
DCAR_026406 Daucus carota HOM05D000797 ORTHO05D004867 1.6e-06 57.0 51 60.8
FAN09G2886 Fragaria x ananassa HOM05D000797 ORTHO05D004867 1.6e-06 57.0 51 58.8
Gorai.009G143100 Gossypium raimondii HOM05D000797 ORTHO05D004867 1.6e-06 57.0 51 56.9
Hma1.2p1_0291F.1_g115440 Hydrangea macrophylla HOM05D000797 ORTHO05D004867 1.6e-06 57.0 51 58.8
PSO063G5435 Papaver somniferum HOM05D000797 ORTHO05D004867 1.6e-06 57.0 39 66.7
PSO832G0660 Papaver somniferum HOM05D000797 ORTHO05D004867 1.6e-06 57.0 39 66.7
THA.LOC109117050 Tarenaya hassleriana HOM05D000797 ORTHO05D021638 1.6e-06 57.0 54 59.3
Actinidia32164 Actinidia chinensis HOM05D000797 ORTHO05D004867 2.1e-06 56.6 51 58.8
Ciclev10025308m.g Citrus clementina HOM05D000797 ORTHO05D004867 2.1e-06 56.6 68 44.1
Actinidia21778 Actinidia chinensis HOM05D000797 ORTHO05D004867 2.7e-06 56.2 51 58.8
Oeu027299.1 Olea europaea HOM05D000797 ORTHO05D004867 2.7e-06 56.2 51 58.8
Potri.003G043900 Populus trichocarpa HOM05D000797 ORTHO05D004867 2.7e-06 56.2 84 40.5
GSVIVG01015168001 Vitis vinifera HOM05D000797 ORTHO05D004867 2.7e-06 56.2 49 59.2
CSS0018055 Camellia sinensis var. sinensis HOM05D000797 ORTHO05D004867 3.6e-06 55.8 37 70.3
CSS0025376 Camellia sinensis var. sinensis HOM05D000797 ORTHO05D004867 3.6e-06 55.8 37 70.3
HanXRQChr10g0312371 Helianthus annuus HOM05D000797 ORTHO05D004867 3.6e-06 55.8 51 54.9
Potri.001G198000 Populus trichocarpa HOM05D000797 ORTHO05D004867 3.6e-06 55.8 84 39.3
MBI07_g17485_MAGBIO Magnolia biondii HOM05D000797 ORTHO05D004867 4.7e-06 55.5 38 73.7
PGR031G0906 Punica granatum HOM05D000797 ORTHO05D004867 4.7e-06 55.5 51 56.9
Thhalv10011375m.g Eutrema salsugineum HOM05D000797 ORTHO05D004867 6.1e-06 55.1 51 54.9
QL05p009499 Quercus lobata HOM05D000797 ORTHO05D004867 6.1e-06 55.1 51 54.9
Rhsim08G0088400 Rhododendron simsii HOM05D000797 ORTHO05D004867 6.1e-06 55.1 51 56.9
THA.LOC104814057 Tarenaya hassleriana HOM05D000797 ORTHO05D021638 6.1e-06 55.1 51 60.8
THA.LOC104822773 Tarenaya hassleriana HOM05D000797 ORTHO05D004867 6.1e-06 55.1 51 60.8
vmacro19539 Vaccinium macrocarpon HOM05D000797 ORTHO05D004867 6.1e-06 55.1 51 58.8
Eucgr.F03161 Eucalyptus grandis HOM05D000797 ORTHO05D004867 7.9e-06 54.7 51 54.9
MD09G1188500 Malus domestica HOM05D000797 ORTHO05D004867 7.9e-06 54.7 51 56.9
Manes.04G141800 Manihot esculenta HOM05D000797 ORTHO05D004867 7.9e-06 54.7 52 55.8


User provided reference genes

Program Settings