Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g15729 Nelumbo nucifera HOM05D007056 ORTHO05D008278 4.2e-167 591.3 294 100.0
CSS0008084 Camellia sinensis var. sinensis HOM05D007056 ORTHO05D008278 6.8e-109 397.9 258 76.0
TAR369G0080 Trochodendron aralioides HOM05D007056 ORTHO05D008278 1.2e-108 397.1 263 75.7
Dinv16370 Davidia involucrata HOM05D007056 ORTHO05D008278 4.4e-108 395.2 262 74.4
Potri.016G060000 Populus trichocarpa HOM05D007056 ORTHO05D008278 1.3e-107 393.7 262 74.8
Aqoxy2G00097 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 6.3e-107 391.3 260 73.5
Cpa.g.sc85.61 Carica papaya HOM05D007056 ORTHO05D008278 1.8e-106 389.8 263 75.3
Actinidia38590 Actinidia chinensis HOM05D007056 ORTHO05D008278 5.4e-106 388.3 265 72.5
CiPaw.09G028900 Carya illinoinensis HOM05D007056 ORTHO05D008278 5.4e-106 388.3 259 73.4
Sabra16G0062800 Salix brachista HOM05D007056 ORTHO05D008278 5.4e-106 388.3 265 74.3
Lj2A365G87 Lonicera japonica HOM05D007056 ORTHO05D008278 1.6e-105 386.7 198 90.4
Lalb_Chr18g0048001 Lupinus albus HOM05D007056 ORTHO05D008278 3.5e-105 385.6 266 72.6
Gorai.012G099400 Gossypium raimondii HOM05D007056 ORTHO05D008278 1.7e-104 383.3 261 72.8
Gohir.D04G089300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 5.0e-104 381.7 252 74.6
MBI19_g17420_MAGBIO Magnolia biondii HOM05D007056 ORTHO05D008278 5.0e-104 381.7 257 73.2
Thecc.05G174400 Theobroma cacao HOM05D007056 ORTHO05D008278 5.0e-104 381.7 309 66.7
Cfa020149 Carpinus fangiana HOM05D007056 ORTHO05D008278 8.6e-104 380.9 265 72.8
Duzib093G0790 Durio zibethinus HOM05D007056 ORTHO05D008278 1.9e-103 379.8 274 71.5
QL07p024320 Quercus lobata HOM05D007056 ORTHO05D008278 5.6e-103 378.3 294 67.3
QL07p024358 Quercus lobata HOM05D007056 ORTHO05D008278 5.6e-103 378.3 294 67.3
TWI77G0776 Tripterygium wilfordii HOM05D007056 ORTHO05D008278 5.6e-103 378.3 252 75.4
Ca_08534_v3 Cicer arietinum L. HOM05D007056 ORTHO05D008278 3.6e-102 375.6 293 66.9
Lj1g0028043 Lotus japonicus HOM05D007056 ORTHO05D008278 4.7e-102 375.2 272 70.2
Glyma.19G149400 Glycine max HOM05D007056 ORTHO05D008278 1.0e-101 374.0 257 70.8
PGR142G3072 Punica granatum HOM05D007056 ORTHO05D008278 1.0e-101 374.0 263 72.6
arahy.Tifrunner.gnm1.ann1.DK1M71 Arachis hypogaea HOM05D007056 ORTHO05D008278 1.4e-101 373.6 257 72.0
Ciclev10012466m.g Citrus clementina HOM05D007056 ORTHO05D008278 1.4e-101 373.6 268 72.0
AUR62011999 Chenopodium quinoa HOM05D007056 ORTHO05D008278 5.2e-101 371.7 267 69.7
Prupe.7G080200 Prunus persica HOM05D007056 ORTHO05D008278 5.2e-101 371.7 269 71.0
FAN09G4108 Fragaria x ananassa HOM05D007056 ORTHO05D008278 6.8e-101 371.3 265 72.1
RcHm_v2.0_Chr3g0479281 Rosa chinensis HOM05D007056 ORTHO05D008278 6.8e-101 371.3 258 72.9
VMungo1383G1827 Vigna mungo HOM05D007056 ORTHO05D008278 6.8e-101 371.3 279 67.7
arahy.Tifrunner.gnm1.ann1.LTU6F0 Arachis hypogaea HOM05D007056 ORTHO05D008278 1.2e-100 370.5 257 71.6
ATR0598G297 Amborella trichopoda HOM05D007056 ORTHO05D008278 2.6e-100 369.4 195 87.2
CANSAT64G0992 Cannabis sativa HOM05D007056 ORTHO05D008278 2.6e-100 369.4 259 71.0
Ah.04g152820 Amaranthus hybridus HOM05D007056 ORTHO05D008278 3.4e-100 369.0 259 71.8
Medtr7g093540 Medicago truncatula HOM05D007056 ORTHO05D008278 3.4e-100 369.0 284 66.5
Os02g0774500 Oryza sativa ssp. japonica HOM05D007056 ORTHO05D008278 4.4e-100 368.6 194 88.1
Cc06_g15700 Coffea canephora HOM05D007056 ORTHO05D008278 1.3e-99 367.1 268 68.3
Eucgr.K01848 Eucalyptus grandis HOM05D007056 ORTHO05D008278 1.3e-99 367.1 196 87.8
SGA_v2.0_scaffold69G23055 Striga asiatica HOM05D007056 ORTHO05D008278 1.3e-99 367.1 261 69.7
FAN14G2508 Fragaria x ananassa HOM05D007056 ORTHO05D008278 1.7e-99 366.7 265 70.9
EL10Ac3g06891 Beta vulgaris HOM05D007056 ORTHO05D008278 2.2e-99 366.3 280 66.4
MD14G1054600 Malus domestica HOM05D007056 ORTHO05D008278 2.2e-99 366.3 275 68.4
AUR62015338 Chenopodium quinoa HOM05D007056 ORTHO05D008278 1.8e-98 363.2 261 70.1
COL.COLO4_05956 Corchorus olitorius HOM05D007056 ORTHO05D008278 1.8e-98 363.2 260 68.5
CAN.G128.50 Capsicum annuum HOM05D007056 ORTHO05D008278 2.4e-98 362.8 262 69.5
Solyc10g080560.2 Solanum lycopersicum HOM05D007056 ORTHO05D008278 5.4e-98 361.7 215 81.9
Phvul.001G143900 Phaseolus vulgaris HOM05D007056 ORTHO05D008278 1.2e-97 360.5 194 86.1
Atru.chr8.1149 Acer truncatum HOM05D007056 ORTHO05D008278 2.0e-97 359.8 257 71.2
Zm00001eb256530 Zea mays HOM05D007056 ORTHO05D008278 2.7e-97 359.4 259 69.9
Rhsim04G0094900 Rhododendron simsii HOM05D007056 ORTHO05D008278 7.8e-97 357.8 272 67.3
PGSC0003DMG400023706 Solanum tuberosum HOM05D007056 ORTHO05D008278 7.8e-97 357.8 264 69.7
THA.LOC104809936 Tarenaya hassleriana HOM05D007056 ORTHO05D008278 7.8e-97 357.8 238 71.8
HanXRQChr01g0010031 Helianthus annuus HOM05D007056 ORTHO05D008278 1.0e-96 357.5 261 67.4
Nitab4.5_0001079g0030 Nicotiana tabacum HOM05D007056 ORTHO05D008278 3.9e-96 355.5 279 65.9
Sopen10g031100 Solanum pennellii HOM05D007056 ORTHO05D008278 6.6e-96 354.8 264 69.3
CsaV3_3G038650 Cucumis sativus L. HOM05D007056 ORTHO05D008278 1.5e-95 353.6 260 68.1
GSVIVG01033475001 Vitis vinifera HOM05D007056 ORTHO05D008278 9.5e-95 350.9 275 66.2
Sp3g10270 Schrenkiella parvula HOM05D007056 ORTHO05D008278 1.2e-94 350.5 247 68.0
BcaB06g25552 Brassica carinata HOM05D007056 ORTHO05D008278 1.6e-94 350.1 257 67.7
A05p37300 Brassica napus HOM05D007056 ORTHO05D008278 4.7e-94 348.6 251 67.7
AT3G12040 Arabidopsis thaliana HOM05D007056 ORTHO05D008278 6.2e-94 348.2 253 66.4
BcaC05g29295 Brassica carinata HOM05D007056 ORTHO05D008278 6.2e-94 348.2 245 68.6
CARHR086600 Cardamine hirsuta HOM05D007056 ORTHO05D008278 1.0e-93 347.4 243 70.0
Carub.0003s1138 Capsella rubella HOM05D007056 ORTHO05D008278 1.4e-93 347.1 255 67.1
DCAR_019779 Daucus carota HOM05D007056 ORTHO05D008278 1.4e-93 347.1 227 74.0
BraA05t22526Z Brassica rapa HOM05D007056 ORTHO05D008278 1.8e-93 346.7 254 67.3
TPR.G35780 Trifolium pratense HOM05D007056 ORTHO05D008278 1.8e-93 346.7 252 69.0
Peaxi162Scf00249g01221 Petunia axillaris HOM05D007056 ORTHO05D008278 4.0e-93 345.5 250 69.6
HPP92_004381 Vanilla planifolia HOM05D007056 ORTHO05D008278 5.2e-93 345.1 198 81.3
Thhalv10021378m.g Eutrema salsugineum HOM05D007056 ORTHO05D008278 8.9e-93 344.4 253 67.6
CDE06G2434 Ceratophyllum demersum HOM05D007056 ORTHO05D008278 1.2e-92 344.0 263 64.6
C05p55770 Brassica napus HOM05D007056 ORTHO05D008278 1.5e-92 343.6 246 68.3
BolC5t34244H Brassica oleracea HOM05D007056 ORTHO05D008278 1.5e-92 343.6 246 68.3
AL3G23650 Arabidopsis lyrata HOM05D007056 ORTHO05D008278 2.6e-92 342.8 248 68.1
Lsat_1_v5_gn_5_165300 Lactuca sativa HOM05D007056 ORTHO05D008278 4.4e-92 342.0 270 63.7
SEGI_25756 Sequoiadendron giganteum HOM05D007056 ORTHO05D008278 1.7e-91 340.1 194 81.4
Hund24814 Selenicereus undatus HOM05D007056 ORTHO05D008278 1.4e-90 337.0 267 66.7
unitig_27.g25110 Utricularia gibba HOM05D007056 ORTHO05D008278 4.1e-90 335.5 270 61.9
PSO675G9168 Papaver somniferum HOM05D007056 ORTHO05D008278 6.0e-89 331.6 269 65.8
AagrBONN_evm.TU.Sc2ySwM_344.2853 Anthoceros agrestis HOM05D007056 ORTHO05D008278 2.3e-88 329.7 194 76.8
Aqoxy3G01855 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 2.3e-88 329.7 271 62.7
Aa31sc80G100 Aethionema arabicum HOM05D007056 ORTHO05D008278 1.1e-87 327.4 213 72.8
PSO541G5037 Papaver somniferum HOM05D007056 ORTHO05D008278 2.5e-87 326.2 269 65.1
SMO146G0068 Selaginella moellendorffii HOM05D007056 ORTHO05D008278 7.3e-87 324.7 193 77.2
Mapoly0003s0280 Marchantia polymorpha HOM05D007056 ORTHO05D008278 4.9e-83 312.0 290 56.6
Pp3c1_41490 Physcomitrium patens HOM05D007056 ORTHO05D008278 3.2e-82 309.3 285 58.2
Psat3g067120 Pisum sativum HOM05D007056 ORTHO05D008278 7.1e-82 308.1 167 83.8
vmacro22110 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 2.7e-81 306.2 349 51.0
ECA248G2501 Erigeron canadensis HOM05D007056 ORTHO05D008278 6.6e-80 301.6 183 75.4
Oeu024494.3 Olea europaea HOM05D007056 ORTHO05D008278 4.7e-78 295.4 241 65.1
CBR_g48019 Chara braunii HOM05D000019 ORTHO05D000002 1.1e-77 294.3 188 71.8
BcaB06g25551 Brassica carinata HOM05D007056 ORTHO05D008278 8.9e-77 291.2 165 79.4
ECA248G2516 Erigeron canadensis HOM05D007056 ORTHO05D008278 2.4e-74 283.1 164 78.7
FvH4_6g21980 Fragaria vesca HOM05D007056 ORTHO05D008278 5.4e-74 282.0 213 69.5
Sed0027134 Sechium edule HOM05D007056 ORTHO05D008278 1.1e-69 267.7 213 66.2
Gohir.A04G057300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 6.6e-64 248.4 190 66.8
Psat3g067080 Pisum sativum HOM05D007056 ORTHO05D008278 4.9e-59 232.3 180 67.8
Psat3g067040 Pisum sativum HOM05D007056 ORTHO05D008278 6.7e-56 221.9 239 54.0
Migut.J01851 Erythranthe guttata HOM05D007056 ORTHO05D008278 8.7e-56 221.5 122 83.6
Manes.08G042900 Manihot esculenta HOM05D007056 ORTHO05D008278 6.2e-54 215.3 171 66.1
ECA248G3402 Erigeron canadensis HOM05D000009 ORTHO05D000008 1.5e-52 210.7 121 79.3
Haze_20013 Corylus avellana HOM05D007056 ORTHO05D008278 5.5e-50 202.2 485 32.6
ClCG10G017660 Citrullus lanatus HOM05D007056 ORTHO05D008278 3.5e-49 199.5 210 55.2
Sc13g0002370 Simmondsia chinensis HOM05D007056 ORTHO05D008278 9.6e-47 191.4 171 59.6
MELO3C009610.2 Cucumis melo HOM05D007056 ORTHO05D008278 6.2e-46 188.7 263 45.6
FAN02G0430 Fragaria x ananassa HOM05D007056 ORTHO05D008278 2.4e-45 186.8 169 63.9
Nitab4.5_0001440g0050 Nicotiana tabacum HOM05D007056 ORTHO05D008278 5.7e-39 165.6 92 80.4
PRCOL_00003183 Prasinoderma coloniale HOM05D007056 ORTHO05D008278 1.9e-34 150.6 215 44.7
Hma1.2p1_0645F.1_g194860 Hydrangea macrophylla HOM05D007056 ORTHO05D008278 7.2e-34 148.7 73 89.0
ECA233G2032 Erigeron canadensis HOM05D007056 ORTHO05D008278 6.3e-30 135.6 76 77.6
SHI31778 Sapria himalayana HOM05D007056 ORTHO05D008278 1.0e-27 128.3 72 76.4
vmacro22990 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 7.9e-17 92.0 96 52.1
SHI31775 Sapria himalayana HOM05D000002 ORTHO05D000001 3.0e-08 63.5 39 82.1
Rhsim04G0095100 Rhododendron simsii HOM05D003299 ORTHO05D003811 3.3e-07 60.1 64 50.0


User provided reference genes

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