Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g15694 Nelumbo nucifera HOM05D006358 ORTHO05D008185 2.5e-153 545.4 277 100.0
TAR633G2634 Trochodendron aralioides HOM05D006358 ORTHO05D008185 8.6e-106 387.5 400 54.8
Actinidia01838 Actinidia chinensis HOM05D006358 ORTHO05D008185 3.0e-90 335.9 410 49.3
Cfa009639 Carpinus fangiana HOM05D006358 ORTHO05D008185 4.8e-88 328.6 390 49.7
Hma1.2p1_0050F.1_g029070 Hydrangea macrophylla HOM05D006358 ORTHO05D008185 2.4e-87 326.2 370 51.1
Prupe.6G013900 Prunus persica HOM05D006358 ORTHO05D008185 3.1e-87 325.9 350 52.6
GSVIVG01025367001 Vitis vinifera HOM05D006358 ORTHO05D008185 6.9e-87 324.7 400 48.5
CiPaw.14G129700 Carya illinoinensis HOM05D006358 ORTHO05D008185 1.2e-86 323.9 392 49.0
Haze_23007 Corylus avellana HOM05D006358 ORTHO05D008185 1.3e-85 320.5 371 50.9
Manes.03G089800 Manihot esculenta HOM05D006358 ORTHO05D008185 4.9e-85 318.5 356 50.6
QL01p009947 Quercus lobata HOM05D006358 ORTHO05D008185 1.1e-84 317.4 391 48.3
CANSAT54G1685 Cannabis sativa HOM05D006358 ORTHO05D008185 9.3e-84 314.3 355 51.0
PSO384G4606 Papaver somniferum HOM05D006358 ORTHO05D008185 9.3e-84 314.3 412 46.1
Phvul.007G005400 Phaseolus vulgaris HOM05D006358 ORTHO05D008185 9.3e-84 314.3 328 52.7
EL10Ac4g10334 Beta vulgaris HOM05D006358 ORTHO05D008185 2.1e-83 313.2 400 46.2
ECA248G2469 Erigeron canadensis HOM05D006358 ORTHO05D008185 3.0e-82 309.3 340 48.8
HanXRQChr11g0345451 Helianthus annuus HOM05D006358 ORTHO05D008185 3.0e-82 309.3 359 47.6
Sc09g0000330 Simmondsia chinensis HOM05D006358 ORTHO05D008185 3.0e-82 309.3 346 50.0
Cc01_g03170 Coffea canephora HOM05D006358 ORTHO05D008185 5.1e-82 308.5 353 50.4
Thecc.09G216800 Theobroma cacao HOM05D006358 ORTHO05D008185 8.7e-82 307.8 350 50.6
PGR119G1893 Punica granatum HOM05D006358 ORTHO05D008185 3.3e-81 305.8 354 48.0
Ciclev10015496m.g Citrus clementina HOM05D006358 ORTHO05D008185 7.4e-81 304.7 354 48.9
Duzib150G0556 Durio zibethinus HOM05D006358 ORTHO05D008185 7.4e-81 304.7 372 48.1
PSO339G4609 Papaver somniferum HOM05D006358 ORTHO05D008185 7.4e-81 304.7 340 50.0
MD11G1015800 Malus domestica HOM05D006358 ORTHO05D008185 1.3e-80 303.9 388 46.6
CsaV3_4G023700 Cucumis sativus L. HOM05D006358 ORTHO05D008185 4.8e-80 302.0 355 48.7
Aqoxy1G00024 Aquilegia oxysepala HOM05D006358 ORTHO05D008185 6.2e-80 301.6 361 48.5
RcHm_v2.0_Chr5g0080731 Rosa chinensis HOM05D006358 ORTHO05D008185 8.1e-80 301.2 399 46.1
Peaxi162Scf00192g00019 Petunia axillaris HOM05D006358 ORTHO05D008185 2.4e-79 299.7 366 47.5
arahy.Tifrunner.gnm1.ann1.TN3NK4 Arachis hypogaea HOM05D006358 ORTHO05D008185 3.1e-79 299.3 392 45.7
DCAR_024375 Daucus carota HOM05D006358 ORTHO05D008185 3.1e-79 299.3 396 46.0
vmacro21759 Vaccinium macrocarpon HOM05D006358 ORTHO05D008185 3.1e-79 299.3 449 44.8
Potri.001G011700 Populus trichocarpa HOM05D006358 ORTHO05D008185 4.0e-79 298.9 398 46.0
Solyc01g006330.4 Solanum lycopersicum HOM05D006358 ORTHO05D008185 4.0e-79 298.9 350 48.0
TWI34G0094 Tripterygium wilfordii HOM05D006358 ORTHO05D008185 5.3e-79 298.5 382 47.9
VMungo0720G2736 Vigna mungo HOM05D006358 ORTHO05D008185 5.3e-79 298.5 392 44.9
FAN21G1333 Fragaria x ananassa HOM05D000259 ORTHO05D008185 6.9e-79 298.1 346 49.4
PGSC0003DMG400032149 Solanum tuberosum HOM05D006358 ORTHO05D008185 2.6e-78 296.2 350 47.7
CAN.G140.8 Capsicum annuum HOM05D006358 ORTHO05D008185 5.8e-78 295.0 350 47.7
FvH4_3g44350 Fragaria vesca HOM05D006358 ORTHO05D008185 5.8e-78 295.0 371 46.9
COL.COLO4_10429 Corchorus olitorius HOM05D006358 ORTHO05D008185 7.6e-78 294.7 374 47.6
Lalb_Chr02g0144221 Lupinus albus HOM05D006358 ORTHO05D008185 9.9e-78 294.3 342 46.5
Nitab4.5_0003436g0040 Nicotiana tabacum HOM05D006358 ORTHO05D008185 9.9e-78 294.3 363 46.6
Eucgr.B02608 Eucalyptus grandis HOM05D006358 ORTHO05D008185 1.7e-77 293.5 393 45.0
Sopen01g002330 Solanum pennellii HOM05D006358 ORTHO05D008185 1.7e-77 293.5 350 47.4
Gorai.004G092800 Gossypium raimondii HOM05D006358 ORTHO05D008185 2.9e-77 292.7 342 48.5
Gohir.A08G078500 Gossypium hirsutum HOM05D006358 ORTHO05D008185 4.9e-77 292.0 366 47.5
ClCG02G023710 Citrullus lanatus HOM05D006358 ORTHO05D008185 1.1e-76 290.8 355 48.5
Migut.D00538 Erythranthe guttata HOM05D006358 ORTHO05D008185 3.2e-76 289.3 373 46.1
Sabra01G0008700 Salix brachista HOM05D006358 ORTHO05D008185 4.2e-76 288.9 423 44.2
Oeu058541.2 Olea europaea HOM05D006358 ORTHO05D008185 2.7e-75 286.2 436 42.0
TPR.G10386 Trifolium pratense HOM05D006358 ORTHO05D008185 6.0e-75 285.0 385 44.9
Lj5g0002595 Lotus japonicus HOM05D006358 ORTHO05D008185 1.0e-74 284.3 392 42.3
Nitab4.5_0005041g0010 Nicotiana tabacum HOM05D006358 ORTHO05D008185 1.8e-74 283.5 407 42.3
THA.LOC104810430 Tarenaya hassleriana HOM05D006358 ORTHO05D008185 7.4e-73 278.1 382 42.1
Psat6g240320 Pisum sativum HOM05D003840 ORTHO05D004565 1.8e-71 273.5 369 42.3
Lj2A674T44 Lonicera japonica HOM05D006358 ORTHO05D008185 1.2e-70 270.8 327 47.4
Medtr1g116320 Medicago truncatula HOM05D006358 ORTHO05D008185 1.5e-70 270.4 345 44.1
Rhsim13G0227500 Rhododendron simsii HOM05D006358 ORTHO05D009383 1.0e-69 267.7 402 43.0
Sp1g37840 Schrenkiella parvula HOM05D006358 ORTHO05D008185 4.2e-68 262.3 388 40.2
MELO3C014648.2 Cucumis melo HOM05D006358 ORTHO05D008185 5.5e-68 261.9 328 47.3
BcaB07g33557 Brassica carinata HOM05D006358 ORTHO05D008185 4.6e-67 258.8 382 41.1
BraA06t23476Z Brassica rapa HOM05D006358 ORTHO05D008185 4.6e-67 258.8 387 41.3
CARHR041130 Cardamine hirsuta HOM05D006358 ORTHO05D008185 4.6e-67 258.8 395 39.5
A06p02670 Brassica napus HOM05D006358 ORTHO05D008185 6.0e-67 258.5 387 41.1
Carub.0001s4002 Capsella rubella HOM05D006358 ORTHO05D008185 6.0e-67 258.5 354 40.4
unitig_0.g179 Utricularia gibba HOM05D006358 ORTHO05D008185 6.0e-67 258.5 334 43.4
AT1G51110 Arabidopsis thaliana HOM05D006358 ORTHO05D008185 7.9e-67 258.1 388 39.4
Cpa.g.sc1127.2 Carica papaya HOM05D006358 ORTHO05D008185 3.9e-66 255.8 375 43.5
BcaC08g43281 Brassica carinata HOM05D006358 ORTHO05D008185 6.7e-66 255.0 343 42.0
C06p06310 Brassica napus HOM05D006358 ORTHO05D008185 6.7e-66 255.0 343 42.0
BolC6t35740H Brassica oleracea HOM05D006358 ORTHO05D008185 6.7e-66 255.0 343 42.0
FAN16G0252 Fragaria x ananassa HOM05D006358 ORTHO05D008185 8.7e-66 254.6 349 44.7
Aa31LG10G3410 Aethionema arabicum HOM05D006358 ORTHO05D008185 2.5e-65 253.1 381 40.2
AL1G58910 Arabidopsis lyrata HOM05D006358 ORTHO05D008185 2.5e-65 253.1 388 39.2
Thhalv10011532m.g Eutrema salsugineum HOM05D006358 ORTHO05D008185 4.3e-65 252.3 389 39.1
FAN11G2908 Fragaria x ananassa HOM05D000259 ORTHO05D008185 4.3e-65 252.3 358 43.0
FAN25G3418 Fragaria x ananassa HOM05D000259 ORTHO05D008185 1.6e-64 250.4 333 45.0
Hund07562 Selenicereus undatus HOM05D006358 ORTHO05D008185 2.1e-64 250.0 328 44.5
SGA_v2.0_scaffold1G00759 Striga asiatica HOM05D006358 ORTHO05D008185 8.2e-64 248.1 319 44.5
Dinv36328 Davidia involucrata HOM05D006358 ORTHO05D008185 1.9e-60 236.9 346 43.6
Glyma.20G244500 Glycine max HOM05D006358 ORTHO05D008185 1.2e-59 234.2 352 41.2
Lsat_1_v5_gn_1_68460 Lactuca sativa HOM05D006358 ORTHO05D008185 8.7e-58 228.0 389 38.8
ATR0807G171 Amborella trichopoda HOM05D006358 ORTHO05D008185 5.7e-57 225.3 364 37.4
AUR62019212 Chenopodium quinoa HOM05D006358 ORTHO05D008185 3.7e-56 222.6 330 43.0
CDE04G2070 Ceratophyllum demersum HOM05D006358 ORTHO05D008185 1.0e-53 214.5 396 36.4
MBI06_g07792_MAGBIO Magnolia biondii HOM05D006358 ORTHO05D008185 8.5e-53 211.5 172 64.5
FAN17G2784 Fragaria x ananassa HOM05D006358 ORTHO05D008185 3.2e-52 209.5 169 66.3
AUR62000042 Chenopodium quinoa HOM05D006358 ORTHO05D008185 7.2e-52 208.4 370 38.6
QL01p009975 Quercus lobata HOM05D006358 ORTHO05D008185 1.2e-51 207.6 157 70.1
Glyma.10G294800 Glycine max HOM05D006358 ORTHO05D008185 2.1e-51 206.8 326 39.0
TWI34G1842 Tripterygium wilfordii HOM05D006358 ORTHO05D008185 3.6e-51 206.1 156 71.2
Atru.chr3.2139 Acer truncatum HOM05D006358 ORTHO05D008185 1.1e-49 201.1 182 61.0
Gohir.D08G088366 Gossypium hirsutum HOM05D006358 ORTHO05D008185 3.3e-49 199.5 117 82.1
Sed0014420 Sechium edule HOM05D006358 ORTHO05D008185 3.3e-49 199.5 305 42.3
Os07g0470700 Oryza sativa ssp. japonica HOM05D006358 ORTHO05D008185 3.7e-48 196.1 375 36.0
Hma1.2p1_0238F.1_g099790 Hydrangea macrophylla HOM05D006358 ORTHO05D008185 2.6e-41 173.3 114 74.6
Ca_11387_v3 Cicer arietinum L. HOM05D006358 ORTHO05D008185 3.3e-41 172.9 266 39.1
SEGI_10329 Sequoiadendron giganteum HOM05D006358 ORTHO05D008185 1.8e-39 167.2 127 67.7
Pp3c6_24510 Physcomitrium patens HOM05D006358 ORTHO05D008185 7.0e-39 165.2 116 71.6
Zm00001eb320130 Zea mays HOM05D006358 ORTHO05D008185 4.5e-38 162.5 380 32.1
Ah.06g193120 Amaranthus hybridus HOM05D000044 ORTHO05D000051 4.2e-36 156.0 105 67.6
Mapoly0065s0038 Marchantia polymorpha HOM05D006358 ORTHO05D008185 4.2e-36 156.0 352 30.4
SMO145G0194 Selaginella moellendorffii HOM05D006358 ORTHO05D008185 2.2e-32 143.7 110 67.3
AagrBONN_evm.TU.Sc2ySwM_340.166 Anthoceros agrestis HOM05D006358 ORTHO05D008185 6.1e-27 125.6 122 52.5
Atru.BG.108.p Acer truncatum HOM05D006358 ORTHO05D008185 2.0e-25 120.6 65 89.2
MD03G1014600 Malus domestica HOM05D006358 ORTHO05D008185 7.5e-25 118.6 97 56.7
C06p06330 Brassica napus HOM05D000466 ORTHO05D000331 3.2e-20 103.2 177 34.5
HPP92_008464 Vanilla planifolia HOM05D006358 ORTHO05D008185 7.2e-20 102.1 117 49.6
Cre03.g176350 Chlamydomonas reinhardtii HOM05D006358 ORTHO05D008185 2.1e-19 100.5 131 43.5
CSS0022118 Camellia sinensis var. sinensis HOM05D006358 ORTHO05D008185 6.1e-19 99.0 66 71.2
BcaC08g43283 Brassica carinata HOM05D006358 ORTHO05D008185 2.6e-17 93.6 78 52.6
BolC6t35742H Brassica oleracea HOM05D006358 ORTHO05D008185 2.6e-17 93.6 78 52.6
BcaB07g33599 Brassica carinata HOM05D006358 ORTHO05D008185 5.7e-17 92.4 54 85.2
CSS0018817 Camellia sinensis var. sinensis HOM05D006358 ORTHO05D008185 3.5e-14 83.2 41 95.1
Glyma.03G107232 Glycine max HOM05D006358 ORTHO05D000607 4.5e-14 82.8 82 51.2
Hma1.2p1_0535F.1_g173790 Hydrangea macrophylla HOM05D006358 ORTHO05D008185 6.6e-13 79.0 40 90.0
EL10As7g23744 Beta vulgaris HOM05D004524 ORTHO05D014474 3.3e-12 76.6 53 75.5
TWI60G1314 Tripterygium wilfordii HOM05D006358 ORTHO05D008185 3.6e-11 73.2 97 48.5
CSS0000942 Camellia sinensis var. sinensis HOM05D006358 ORTHO05D008185 4.7e-11 72.8 51 64.7
Ah.06g193130 Amaranthus hybridus HOM05D006358 ORTHO05D008185 8.0e-11 72.0 102 47.1
Cpa.g.sc1127.1 Carica papaya HOM05D006358 ORTHO05D008185 1.5e-09 67.8 98 38.8
Mapoly0021s0119 Marchantia polymorpha HOM05D006422 ORTHO05D007992 3.7e-08 63.2 240 23.8
SMO364G0843 Selaginella moellendorffii HOM05D006422 ORTHO05D007992 1.4e-07 61.2 196 27.0
SEGI_16251 Sequoiadendron giganteum HOM05D006358 ORTHO05D386659 2.0e-06 57.4 57 47.4


User provided reference genes

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