Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g15692 Nelumbo nucifera HOM05D003200 ORTHO05D003574 1.4e-94 349.7 197 100.0
TAR369G0274 Trochodendron aralioides HOM05D003200 ORTHO05D003574 2.0e-24 116.7 159 46.5
TAR633G1334 Trochodendron aralioides HOM05D003200 ORTHO05D003574 1.6e-21 107.1 159 45.9
MBI06_g07796_MAGBIO Magnolia biondii HOM05D003200 ORTHO05D003574 6.7e-20 101.7 157 43.3
GSVIVG01001362001 Vitis vinifera HOM05D003200 ORTHO05D003574 6.7e-20 101.7 114 54.4
TAR623G0555 Trochodendron aralioides HOM05D003200 ORTHO05D003574 8.8e-20 101.3 171 42.1
TAR636G3550 Trochodendron aralioides HOM05D003200 ORTHO05D003574 1.5e-19 100.5 147 44.9
Dinv43495 Davidia involucrata HOM05D003200 ORTHO05D003574 1.4e-17 94.0 108 49.1
Sc09g0000340 Simmondsia chinensis HOM05D003200 ORTHO05D003574 1.4e-17 94.0 204 34.3
Dinv43936 Davidia involucrata HOM05D003200 ORTHO05D003574 7.0e-17 91.7 117 47.9
TWI32G0311 Tripterygium wilfordii HOM05D003200 ORTHO05D003574 7.0e-17 91.7 114 51.8
Hma1.2p1_0505F.1_g168170 Hydrangea macrophylla HOM05D003200 ORTHO05D003574 2.0e-16 90.1 119 46.2
TWI60G0814 Tripterygium wilfordii HOM05D003200 ORTHO05D003574 4.5e-16 89.0 110 50.9
Ca_11388_v3 Cicer arietinum L. HOM05D003200 ORTHO05D003574 1.7e-15 87.0 117 47.9
PGSC0003DMG400024057 Solanum tuberosum HOM05D003200 ORTHO05D003574 3.8e-15 85.9 114 48.2
Actinidia06303 Actinidia chinensis HOM05D003200 ORTHO05D003574 8.5e-15 84.7 130 43.1
TPR.G10419 Trifolium pratense HOM05D003200 ORTHO05D003574 9.4e-14 81.3 121 43.8
Dinv36326 Davidia involucrata HOM05D003200 ORTHO05D003574 1.2e-13 80.9 111 55.0
Hund21653 Selenicereus undatus HOM05D003200 ORTHO05D003574 2.1e-13 80.1 168 36.3
Sopen01g010160 Solanum pennellii HOM05D003200 ORTHO05D003574 2.1e-13 80.1 118 46.6
Glyma.10G294900 Glycine max HOM05D003200 ORTHO05D003574 2.7e-13 79.7 122 42.6
CiPaw.14G129600 Carya illinoinensis HOM05D003200 ORTHO05D003574 8.0e-13 78.2 108 42.6
Sc16g0011990 Simmondsia chinensis HOM05D003200 ORTHO05D003574 8.0e-13 78.2 169 34.9
VMungo0720G1305 Vigna mungo HOM05D003200 ORTHO05D003574 1.4e-12 77.4 103 44.7
Lalb_Chr02g0144231 Lupinus albus HOM05D003200 ORTHO05D003574 1.8e-12 77.0 115 42.6
CDE04G0125 Ceratophyllum demersum HOM05D003200 ORTHO05D003574 3.0e-12 76.3 114 42.1
Actinidia06863 Actinidia chinensis HOM05D003200 ORTHO05D003574 6.7e-12 75.1 139 47.5
Glyma.20G244700 Glycine max HOM05D003200 ORTHO05D003574 1.1e-11 74.3 84 47.6
Phvul.007G005200 Phaseolus vulgaris HOM05D003200 ORTHO05D003574 1.1e-11 74.3 100 42.0
TWI34G0579 Tripterygium wilfordii HOM05D003200 ORTHO05D003574 1.1e-11 74.3 113 43.4
Medtr1g116330 Medicago truncatula HOM05D003200 ORTHO05D003574 3.3e-11 72.8 89 48.3
EL10Ac4g10333 Beta vulgaris HOM05D003200 ORTHO05D003574 4.4e-11 72.4 140 39.3
Psat6g241840 Pisum sativum HOM05D003200 ORTHO05D003574 4.4e-11 72.4 122 44.3
CsaV3_4G023690 Cucumis sativus L. HOM05D003200 ORTHO05D003574 5.7e-11 72.0 168 34.5
Cfa009640 Carpinus fangiana HOM05D003200 ORTHO05D003574 9.7e-11 71.2 116 43.1
CDE02G1896 Ceratophyllum demersum HOM05D003200 ORTHO05D003574 9.7e-11 71.2 108 39.8
Lj5g0003842 Lotus japonicus HOM05D003200 ORTHO05D003574 1.3e-10 70.9 149 34.9
ClCG02G023720 Citrullus lanatus HOM05D003200 ORTHO05D003574 1.7e-10 70.5 103 38.8
CSS0033476 Camellia sinensis var. sinensis HOM05D003200 ORTHO05D003574 2.2e-10 70.1 130 56.2
MELO3C014649.2 Cucumis melo HOM05D003200 ORTHO05D003574 2.2e-10 70.1 168 33.9
Lsat_1_v5_gn_6_49141 Lactuca sativa HOM05D003200 ORTHO05D003574 2.2e-10 70.1 132 43.9
Lalb_Chr21g0307561 Lupinus albus HOM05D003200 ORTHO05D003574 2.8e-10 69.7 90 48.9
HPP92_008488 Vanilla planifolia HOM05D003200 ORTHO05D003574 8.2e-10 68.2 120 39.2
PSO339G4963 Papaver somniferum HOM05D003200 ORTHO05D003574 1.1e-09 67.8 167 41.9
Aqoxy1G00122 Aquilegia oxysepala HOM05D003200 ORTHO05D003574 1.4e-09 67.4 137 46.7
CiPaw.13G170600 Carya illinoinensis HOM05D003200 ORTHO05D003574 2.4e-09 66.6 91 47.3
MELO3C014647.2 Cucumis melo HOM05D003200 ORTHO05D003574 5.3e-09 65.5 119 37.0
HPP92_005025 Vanilla planifolia HOM05D003200 ORTHO05D003574 5.3e-09 65.5 162 34.0
Oeu058542.1 Olea europaea HOM05D003200 ORTHO05D003574 7.0e-09 65.1 165 29.1
Prupe.6G014100 Prunus persica HOM05D003200 ORTHO05D003574 7.0e-09 65.1 112 41.1
Sed0003084 Sechium edule HOM05D003200 ORTHO05D003574 9.1e-09 64.7 119 35.3
Lalb_Chr06g0164391 Lupinus albus HOM05D003200 ORTHO05D003574 1.2e-08 64.3 120 37.5
SalBow7G0874 Salvia bowleyana HOM05D003200 ORTHO05D003574 1.2e-08 64.3 135 32.6
SalBow7G4053 Salvia bowleyana HOM05D003200 ORTHO05D003574 1.2e-08 64.3 135 32.6
CsaV3_4G023710 Cucumis sativus L. HOM05D003200 ORTHO05D003574 2.6e-08 63.2 117 35.9
HanXRQChr11g0345461 Helianthus annuus HOM05D003200 ORTHO05D003574 2.6e-08 63.2 134 38.8
Sed0018020 Sechium edule HOM05D003200 ORTHO05D003574 4.5e-08 62.4 80 45.0
Ah.06g193140 Amaranthus hybridus HOM05D003200 ORTHO05D003574 5.9e-08 62.0 197 30.5
Cc01_g03340 Coffea canephora HOM05D003200 ORTHO05D003574 1.0e-07 61.2 122 37.7
Aa31LG1G13220 Aethionema arabicum HOM05D003200 ORTHO05D003574 1.3e-07 60.8 136 36.0
MD03G1014800 Malus domestica HOM05D003200 ORTHO05D003574 1.7e-07 60.5 105 45.7
Manes.03G089900 Manihot esculenta HOM05D003200 ORTHO05D003574 1.7e-07 60.5 139 35.3
Lj1P478T20 Lonicera japonica HOM05D003200 ORTHO05D003574 2.9e-07 59.7 59 61.0
Peaxi162Scf00780g00043 Petunia axillaris HOM05D003200 ORTHO05D003574 2.9e-07 59.7 108 41.7
SalBow2G0964 Salvia bowleyana HOM05D003200 ORTHO05D003574 3.8e-07 59.3 175 31.4
QL01p009941 Quercus lobata HOM05D003200 ORTHO05D003574 5.0e-07 58.9 133 34.6
Nitab4.5_0005041g0060 Nicotiana tabacum HOM05D003200 ORTHO05D003574 6.5e-07 58.5 63 58.7
unitig_26.g10121 Utricularia gibba HOM05D003200 ORTHO05D003574 6.5e-07 58.5 148 30.4
Nitab4.5_0003436g0110 Nicotiana tabacum HOM05D003200 ORTHO05D003574 8.5e-07 58.2 92 47.8
Thecc.09G216900 Theobroma cacao HOM05D003200 ORTHO05D003574 8.5e-07 58.2 122 40.2
Ciclev10015088m.g Citrus clementina HOM05D003200 ORTHO05D003574 1.5e-06 57.4 129 39.5
Rhsim01G0186500 Rhododendron simsii HOM05D003200 ORTHO05D003574 1.5e-06 57.4 114 38.6
SalBow2G1492 Salvia bowleyana HOM05D003200 ORTHO05D003574 1.5e-06 57.4 123 36.6
SalBow2G2949 Salvia bowleyana HOM05D003200 ORTHO05D003574 1.9e-06 57.0 123 36.6
Gohir.A08G078400 Gossypium hirsutum HOM05D003200 ORTHO05D003574 2.5e-06 56.6 117 38.5
PGR119G1170 Punica granatum HOM05D003200 ORTHO05D003574 2.5e-06 56.6 109 36.7
Gorai.009G070100 Gossypium raimondii HOM05D003200 ORTHO05D003574 4.2e-06 55.8 122 35.2
MD11G1016000 Malus domestica HOM05D003200 ORTHO05D003574 4.2e-06 55.8 79 58.2
Gohir.D08G088300 Gossypium hirsutum HOM05D003200 ORTHO05D003574 5.5e-06 55.5 118 36.4
Duzib150G1584 Durio zibethinus HOM05D003200 ORTHO05D003574 9.4e-06 54.7 122 38.5


User provided reference genes

Program Settings