Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g15618 Nelumbo nucifera HOM05D000188 ORTHO05D005675 1.3e-78 296.2 141 100.0
Nn1g05298 Nelumbo nucifera HOM05D000188 ORTHO05D005675 2.9e-49 198.7 117 83.8
Nn5g29054 Nelumbo nucifera HOM05D000188 ORTHO05D005675 1.6e-47 193.0 117 81.2
TAR376G1048 Trochodendron aralioides HOM05D000188 ORTHO05D005675 1.4e-43 179.9 117 74.4
Lj4A107T49 Lonicera japonica HOM05D000188 ORTHO05D005675 2.2e-41 172.6 115 72.2
MD08G1179700 Malus domestica HOM05D000188 ORTHO05D005675 2.2e-41 172.6 117 71.8
Haze_00578 Corylus avellana HOM05D000188 ORTHO05D005675 3.8e-41 171.8 115 72.2
TAR381G0054 Trochodendron aralioides HOM05D000188 ORTHO05D005675 6.5e-41 171.0 115 73.9
Cfa015917 Carpinus fangiana HOM05D000188 ORTHO05D005675 8.4e-41 170.6 115 71.3
Dinv07790 Davidia involucrata HOM05D000188 ORTHO05D005675 1.1e-40 170.2 117 70.9
CSS0013381 Camellia sinensis var. sinensis HOM05D000188 ORTHO05D005675 1.4e-40 169.9 117 68.4
CSS0018464 Camellia sinensis var. sinensis HOM05D000188 ORTHO05D005675 1.4e-40 169.9 117 68.4
Prupe.1G513000 Prunus persica HOM05D000188 ORTHO05D005675 4.2e-40 168.3 117 69.2
Lj4A716T76 Lonicera japonica HOM05D000188 ORTHO05D005675 5.5e-40 167.9 117 68.4
Lj4A719T62 Lonicera japonica HOM05D000188 ORTHO05D005675 5.5e-40 167.9 117 68.4
QL12p036114 Quercus lobata HOM05D000188 ORTHO05D005675 2.1e-39 166.0 117 65.8
Oeu061481.1 Olea europaea HOM05D000188 ORTHO05D005675 2.7e-39 165.6 117 67.5
Sabra05G0126300 Salix brachista HOM05D000188 ORTHO05D005675 2.7e-39 165.6 118 66.9
Atru.chr13.1255 Acer truncatum HOM05D000188 ORTHO05D005675 3.5e-39 165.2 115 71.3
Sabra02G0073800 Salix brachista HOM05D000188 ORTHO05D005675 3.5e-39 165.2 117 66.7
vmacro04758 Vaccinium macrocarpon HOM05D000188 ORTHO05D005675 6.0e-39 164.5 117 66.7
PSO541G2134 Papaver somniferum HOM05D000188 ORTHO05D005675 7.9e-39 164.1 115 71.3
Potri.005G168300 Populus trichocarpa HOM05D000188 ORTHO05D005675 7.9e-39 164.1 118 66.1
Cc10_g07500 Coffea canephora HOM05D000188 ORTHO05D005675 1.0e-38 163.7 117 68.4
Aqoxy6G00581 Aquilegia oxysepala HOM05D000188 ORTHO05D005675 1.3e-38 163.3 117 69.2
FAN13G2300 Fragaria x ananassa HOM05D000188 ORTHO05D005675 1.3e-38 163.3 117 67.5
Dinv44753 Davidia involucrata HOM05D000446 ORTHO05D005675 1.8e-38 162.9 118 69.5
RcHm_v2.0_Chr7g0239841 Rosa chinensis HOM05D000188 ORTHO05D005675 1.8e-38 162.9 117 67.5
FAN08G1634 Fragaria x ananassa HOM05D000188 ORTHO05D005675 3.0e-38 162.2 117 66.7
FAN04G2787 Fragaria x ananassa HOM05D000188 ORTHO05D005675 5.1e-38 161.4 117 66.7
PSO133G0009 Papaver somniferum HOM05D000188 ORTHO05D005675 6.7e-38 161.0 116 71.6
GSVIVG01009001001 Vitis vinifera HOM05D000188 ORTHO05D005675 6.7e-38 161.0 117 68.4
Rhsim08G0249100 Rhododendron simsii HOM05D000188 ORTHO05D005675 8.7e-38 160.6 117 65.8
CiPaw.06G021100 Carya illinoinensis HOM05D000188 ORTHO05D005675 1.1e-37 160.2 118 66.9
Dinv13036 Davidia involucrata HOM05D001180 ORTHO05D005675 1.1e-37 160.2 118 66.1
MD15G1364900 Malus domestica HOM05D000188 ORTHO05D005675 1.1e-37 160.2 117 67.5
ClCG11G015400 Citrullus lanatus HOM05D000188 ORTHO05D005675 1.5e-37 159.8 117 64.1
FvH4_5g37860 Fragaria vesca HOM05D000188 ORTHO05D005675 1.9e-37 159.5 117 65.8
FAN18G4400 Fragaria x ananassa HOM05D000188 ORTHO05D005675 1.9e-37 159.5 117 65.8
Oeu024550.1 Olea europaea HOM05D000188 ORTHO05D005675 2.5e-37 159.1 117 65.0
CiPaw.06G021000 Carya illinoinensis HOM05D000188 ORTHO05D005675 3.3e-37 158.7 118 66.1
Glyma.07G037400 Glycine max HOM05D000188 ORTHO05D005675 3.3e-37 158.7 117 66.7
Glyma.16G006800 Glycine max HOM05D000188 ORTHO05D005675 3.3e-37 158.7 117 66.7
Ciclev10030523m.g Citrus clementina HOM05D000188 ORTHO05D005675 4.3e-37 158.3 116 66.4
Manes.12G040200 Manihot esculenta HOM05D000188 ORTHO05D005675 4.3e-37 158.3 110 66.4
Actinidia30754 Actinidia chinensis HOM05D000188 ORTHO05D005675 5.7e-37 157.9 117 65.0
MELO3C010422.2 Cucumis melo HOM05D000188 ORTHO05D005675 9.6e-37 157.1 117 63.2
Phvul.010G130800 Phaseolus vulgaris HOM05D000188 ORTHO05D005675 9.6e-37 157.1 117 65.0
Thecc.08G110700 Theobroma cacao HOM05D000188 ORTHO05D005675 9.6e-37 157.1 116 68.1
CDE10G0995 Ceratophyllum demersum HOM05D000188 ORTHO05D005675 1.3e-36 156.8 123 62.6
COL.COLO4_16446 Corchorus olitorius HOM05D000188 ORTHO05D005675 1.6e-36 156.4 115 66.1
Duzib093G0224 Durio zibethinus HOM05D000188 ORTHO05D005675 1.6e-36 156.4 115 66.1
VMungo0331G0331 Vigna mungo HOM05D000188 ORTHO05D005675 2.1e-36 156.0 117 64.1
Actinidia10304 Actinidia chinensis HOM05D000188 ORTHO05D005675 4.8e-36 154.8 117 65.8
Gohir.A05G228600 Gossypium hirsutum HOM05D000188 ORTHO05D005675 4.8e-36 154.8 115 65.2
Lsat_1_v5_gn_1_4241 Lactuca sativa HOM05D000188 ORTHO05D005675 4.8e-36 154.8 115 68.7
TWI34G0328 Tripterygium wilfordii HOM05D000188 ORTHO05D005675 4.8e-36 154.8 117 67.5
CsaV3_4G028690 Cucumis sativus L. HOM05D000188 ORTHO05D005675 6.3e-36 154.5 117 63.2
Sed0019055 Sechium edule HOM05D000188 ORTHO05D005675 6.3e-36 154.5 117 62.4
Solyc04g072830.4 Solanum lycopersicum HOM05D000188 ORTHO05D005675 6.3e-36 154.5 121 61.2
Sopen04g028990 Solanum pennellii HOM05D000188 ORTHO05D005675 6.3e-36 154.5 121 61.2
Lj3g0012997 Lotus japonicus HOM05D000188 ORTHO05D005675 1.8e-35 152.9 115 64.3
Gohir.D05G231000 Gossypium hirsutum HOM05D000188 ORTHO05D005675 2.4e-35 152.5 115 64.3
Nitab4.5_0003496g0050 Nicotiana tabacum HOM05D000188 ORTHO05D005675 2.4e-35 152.5 117 60.7
Sed0015371 Sechium edule HOM05D000188 ORTHO05D005675 2.4e-35 152.5 117 61.5
Gorai.009G239200 Gossypium raimondii HOM05D000188 ORTHO05D005675 4.1e-35 151.8 116 65.5
HanXRQChr02g0044691 Helianthus annuus HOM05D000188 ORTHO05D005675 4.1e-35 151.8 115 67.0
CANSAT25G0411 Cannabis sativa HOM05D000188 ORTHO05D005675 5.3e-35 151.4 115 62.6
PGSC0003DMG400009483 Solanum tuberosum HOM05D000188 ORTHO05D005675 5.3e-35 151.4 122 61.5
MSTRG.24962 Avicennia marina HOM05D000188 ORTHO05D005675 6.9e-35 151.0 117 63.2
Duzib116G0930 Durio zibethinus HOM05D000188 ORTHO05D005675 6.9e-35 151.0 115 62.6
Psat4g183080 Pisum sativum HOM05D000188 ORTHO05D005675 6.9e-35 151.0 117 62.4
Manes.03G203500 Manihot esculenta HOM05D000188 ORTHO05D005675 9.0e-35 150.6 116 64.7
ECA247G2930 Erigeron canadensis HOM05D000188 ORTHO05D005675 1.5e-34 149.8 115 66.1
Peaxi162Scf00041g00215 Petunia axillaris HOM05D000188 ORTHO05D005675 1.5e-34 149.8 117 60.7
CAN.G517.9 Capsicum annuum HOM05D000188 ORTHO05D005675 2.0e-34 149.4 120 61.7
Gohir.D05G269500 Gossypium hirsutum HOM05D000188 ORTHO05D005675 2.0e-34 149.4 118 61.9
Gorai.009G282100 Gossypium raimondii HOM05D000188 ORTHO05D005675 2.0e-34 149.4 118 61.9
Medtr8g020390 Medicago truncatula HOM05D000188 ORTHO05D005675 2.0e-34 149.4 117 61.5
Lalb_Chr25g0281191 Lupinus albus HOM05D000188 ORTHO05D005675 2.6e-34 149.1 117 61.5
Eucgr.E02072 Eucalyptus grandis HOM05D000188 ORTHO05D005675 3.4e-34 148.7 117 60.7
SGA_v2.0_scaffold267G46182 Striga asiatica HOM05D000188 ORTHO05D005675 3.4e-34 148.7 117 62.4
Sc14g0007270 Simmondsia chinensis HOM05D000188 ORTHO05D005675 1.0e-33 147.1 116 59.5
AUR62030301 Chenopodium quinoa HOM05D000188 ORTHO05D005675 1.3e-33 146.7 117 59.8
Hma1.2p1_0120F.1_g057180 Hydrangea macrophylla HOM05D000188 ORTHO05D005675 1.3e-33 146.7 117 61.5
Ah.08g212920 Amaranthus hybridus HOM05D000188 ORTHO05D005675 1.7e-33 146.4 119 61.3
Gohir.A05G267700 Gossypium hirsutum HOM05D000188 ORTHO05D005675 1.7e-33 146.4 115 62.6
Hund26656 Selenicereus undatus HOM05D000188 ORTHO05D005675 2.2e-33 146.0 118 61.0
AUR62018362 Chenopodium quinoa HOM05D000188 ORTHO05D005675 2.9e-33 145.6 118 58.5
HanXRQChr04g0112991 Helianthus annuus HOM05D000188 ORTHO05D005675 5.0e-33 144.8 115 65.2
CDE10G1034 Ceratophyllum demersum HOM05D000188 ORTHO05D005675 1.1e-32 143.7 98 68.4
Potri.002G093500 Populus trichocarpa HOM05D000188 ORTHO05D005675 1.4e-32 143.3 118 61.0
unitig_46.g18000 Utricularia gibba HOM05D000188 ORTHO05D005675 1.4e-32 143.3 117 59.8
ECA246G3036 Erigeron canadensis HOM05D000188 ORTHO05D005675 2.5e-32 142.5 116 62.9
Lsat_1_v5_gn_6_102281 Lactuca sativa HOM05D000188 ORTHO05D005675 4.2e-32 141.7 115 62.6
unitig_26.g9870 Utricularia gibba HOM05D000188 ORTHO05D005675 7.2e-32 141.0 117 61.5
ATR0068G035 Amborella trichopoda HOM05D000188 ORTHO05D005675 9.3e-32 140.6 118 61.0
Migut.C00228 Erythranthe guttata HOM05D000188 ORTHO05D005675 9.3e-32 140.6 118 58.5
Migut.O00725 Erythranthe guttata HOM05D000188 ORTHO05D005675 9.3e-32 140.6 118 58.5
Migut.C00230 Erythranthe guttata HOM05D000188 ORTHO05D005675 2.1e-31 139.4 118 57.6
Migut.O00753 Erythranthe guttata HOM05D000188 ORTHO05D005675 2.1e-31 139.4 118 57.6
HPP92_006003 Vanilla planifolia HOM05D000188 ORTHO05D005675 7.9e-31 137.5 120 60.8
HanXRQChr05g0162191 Helianthus annuus HOM05D000188 ORTHO05D005675 1.8e-30 136.3 115 60.0
SEGI_13100 Sequoiadendron giganteum HOM05D000188 ORTHO05D005675 2.3e-30 136.0 116 58.6
arahy.Tifrunner.gnm1.ann1.IL79Z4 Arachis hypogaea HOM05D000188 ORTHO05D005675 2.5e-29 132.5 115 58.3
EL10Ac4g08219 Beta vulgaris HOM05D000188 ORTHO05D005675 1.6e-28 129.8 107 59.8
Cpa.g.sc66.83 Carica papaya HOM05D000188 ORTHO05D005675 2.2e-28 129.4 107 61.7
TPR.G32505 Trifolium pratense HOM05D000188 ORTHO05D005675 2.2e-28 129.4 152 46.7
CARHR238010 Cardamine hirsuta HOM05D000188 ORTHO05D005675 1.8e-27 126.3 115 56.5
Carub.0007s1050 Capsella rubella HOM05D000188 ORTHO05D005675 2.4e-27 125.9 115 57.4
Thhalv10024227m.g Eutrema salsugineum HOM05D000188 ORTHO05D005675 2.4e-27 125.9 115 57.4
A03p59450 Brassica napus HOM05D000188 ORTHO05D005675 4.1e-27 125.2 115 57.4
C07p57500 Brassica napus HOM05D000188 ORTHO05D005675 4.1e-27 125.2 115 57.4
BolC7t46217H Brassica oleracea HOM05D000188 ORTHO05D005675 4.1e-27 125.2 115 57.4
BraA03t15001Z Brassica rapa HOM05D000188 ORTHO05D005675 4.1e-27 125.2 115 57.4
Sp7g27950 Schrenkiella parvula HOM05D000188 ORTHO05D005675 4.1e-27 125.2 115 57.4
AL7G22100 Arabidopsis lyrata HOM05D000188 ORTHO05D005675 5.3e-27 124.8 115 55.7
AT4G30100 Arabidopsis thaliana HOM05D000188 ORTHO05D005675 9.1e-27 124.0 115 56.5
Aa31LG2G20470 Aethionema arabicum HOM05D000188 ORTHO05D005675 1.5e-26 123.2 115 56.5
SHI09407 Sapria himalayana HOM05D000188 ORTHO05D005675 3.4e-26 122.1 115 55.7
Ca_23369_v3 Cicer arietinum L. HOM05D000188 ORTHO05D005675 1.3e-25 120.2 117 55.6
Zm00001eb026030 Zea mays HOM05D000188 ORTHO05D005675 5.0e-25 118.2 120 50.0
THA.LOC104814664 Tarenaya hassleriana HOM05D000188 ORTHO05D005675 8.5e-25 117.5 115 54.8
Actinidia33149 Actinidia chinensis HOM05D000188 ORTHO05D005675 1.4e-24 116.7 92 63.0
Zm00001eb224450 Zea mays HOM05D000188 ORTHO05D005675 2.5e-24 115.9 119 50.4
AT2G19120 Arabidopsis thaliana HOM05D000188 ORTHO05D005675 1.2e-23 113.6 115 52.2
AL3G52810 Arabidopsis lyrata HOM05D000188 ORTHO05D005675 1.6e-23 113.2 115 52.2
Carub.0003s3335 Capsella rubella HOM05D000188 ORTHO05D005675 7.4e-21 104.4 115 52.2
CARHR109630 Cardamine hirsuta HOM05D000188 ORTHO05D005675 1.7e-20 103.2 115 48.7
arahy.Tifrunner.gnm1.ann1.5SJ4SU Arachis hypogaea HOM05D000188 ORTHO05D005675 1.8e-19 99.8 119 49.6
arahy.Tifrunner.gnm1.ann1.BEB4AA Arachis hypogaea HOM05D000188 ORTHO05D005675 4.1e-19 98.6 115 48.7
Pp3c19_7860 Physcomitrium patens HOM05D000188 ORTHO05D005675 5.5e-16 88.2 115 45.2
Mapoly0003s0124 Marchantia polymorpha HOM05D000188 ORTHO05D005675 9.4e-16 87.4 116 43.1
BcaNung00518 Brassica carinata HOM05D000188 ORTHO05D005675 2.1e-15 86.3 115 47.0
AagrBONN_evm.TU.Sc2ySwM_228.484 Anthoceros agrestis HOM05D000188 ORTHO05D005675 1.5e-13 80.1 111 40.5
DCAR_001037 Daucus carota HOM05D000188 ORTHO05D005675 2.2e-09 66.2 43 69.8
Eucgr.E01930 Eucalyptus grandis HOM05D000188 ORTHO05D005675 1.6e-07 60.1 45 55.6
MBI05_g34465_MAGBIO Magnolia biondii HOM05D000188 ORTHO05D005675 4.0e-06 55.5 51 56.9


User provided reference genes

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