Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g15615 Nelumbo nucifera HOM05D000107 ORTHO05D000062 1.0e-44 183.0 89 100.0
CSS0004309 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.0e-12 76.6 89 44.9
CSS0004152 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 3.0e-12 75.1 89 44.9
CSS0030837 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 3.0e-12 75.1 87 46.0
CSS0007710 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.0e-12 74.7 90 44.4
CSS0009480 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.0e-12 74.7 90 44.4
CSS0028705 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.0e-12 74.7 90 44.4
CSS0031171 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.0e-12 74.7 90 44.4
CSS0007461 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.2e-12 74.3 90 44.4
CSS0018002 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.2e-12 74.3 90 44.4
CSS0036122 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.2e-12 74.3 90 44.4
CSS0047073 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.2e-12 74.3 90 44.4
CSS0018298 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 8.9e-12 73.6 84 46.4
CSS0013241 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.2e-11 73.2 90 44.4
CSS0014451 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.2e-11 73.2 84 46.4
TAR541G0002 Trochodendron aralioides HOM05D000107 ORTHO05D000062 1.2e-11 73.2 85 51.8
CSS0007472 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.5e-11 72.8 90 44.4
CSS0023291 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.5e-11 72.8 84 46.4
CSS0044341 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.5e-11 72.8 84 46.4
CSS0048713 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.5e-11 72.8 84 46.4
CSS0000324 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.0e-11 72.4 89 42.7
CSS0009906 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.0e-11 72.4 85 44.7
CSS0021554 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.6e-11 72.0 84 46.4
CSS0026161 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.6e-11 72.0 90 44.4
CSS0043289 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.6e-11 72.0 84 46.4
TAR344G0006 Trochodendron aralioides HOM05D000107 ORTHO05D000062 5.7e-11 70.9 80 42.5
CSS0013777 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 9.8e-11 70.1 84 45.2
PSO213G0001 Papaver somniferum HOM05D000107 ORTHO05D000062 9.8e-11 70.1 84 42.9
Rhsim11G0004800 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.8e-11 70.1 85 47.1
MBI19_g18418_MAGBIO Magnolia biondii HOM05D000107 ORTHO05D000062 1.3e-10 69.7 81 48.1
Rhsim01G0072500 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.3e-10 69.7 91 37.4
RhsimUnG0245800 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.8e-10 68.6 92 42.4
TAR003G0008 Trochodendron aralioides HOM05D000107 ORTHO05D000062 6.3e-10 67.4 83 39.8
Os01g0768600 Oryza sativa ssp. japonica HOM05D000107 ORTHO05D000062 8.3e-10 67.0 84 45.2
Os12g0544600 Oryza sativa ssp. japonica HOM05D000107 ORTHO05D000062 8.3e-10 67.0 84 45.2
TAR165G0003 Trochodendron aralioides HOM05D000107 ORTHO05D000062 8.3e-10 67.0 86 37.2
Os02g0543900 Oryza sativa ssp. japonica HOM05D000107 ORTHO05D000062 3.1e-09 65.1 83 44.6
Rhsim01G0080000 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.4e-09 64.3 87 40.2
SGA_v2.0_scaffold251G45053 Striga asiatica HOM05D000107 ORTHO05D000062 5.4e-09 64.3 83 44.6
Rhsim01G0081600 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.0e-09 63.9 87 39.1
Nn1g07035 Nelumbo nucifera HOM05D000107 ORTHO05D000062 9.2e-09 63.5 88 35.2
TAR211G0002 Trochodendron aralioides HOM05D000107 ORTHO05D000062 9.2e-09 63.5 83 43.4
TAR528G0005 Trochodendron aralioides HOM05D000107 ORTHO05D000062 9.2e-09 63.5 83 37.3
Rhsim01G0079200 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.6e-08 62.8 87 39.1
Rhsim01G0104600 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.0e-08 62.4 82 39.0
Rhsim09G0075900 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.0e-08 62.4 82 40.2
Aqoxy2G01646 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 3.5e-08 61.6 86 39.5
Aqoxy4G02090 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 4.5e-08 61.2 81 38.3
ECA234G2344 Erigeron canadensis HOM05D000107 ORTHO05D000062 4.5e-08 61.2 78 44.9
TAR634G0002 Trochodendron aralioides HOM05D000107 ORTHO05D000062 4.5e-08 61.2 84 42.9
Atru.chr3.1416 Acer truncatum HOM05D000107 ORTHO05D000062 5.9e-08 60.8 87 40.2
HanXRQChr03g0071531 Helianthus annuus HOM05D000107 ORTHO05D000062 7.8e-08 60.5 88 40.9
Rhsim01G0178800 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.8e-08 60.5 86 39.5
Rhsim04G0055300 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.8e-08 60.5 87 40.2
Rhsim06G0085100 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.8e-08 60.5 82 42.7
Rhsim08G0137300 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.8e-08 60.5 82 42.7
QL04p092704 Quercus lobata HOM05D000107 ORTHO05D000062 1.0e-07 60.1 83 38.6
Rhsim02G0220700 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.0e-07 60.1 82 42.7
Rhsim04G0054900 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.3e-07 59.7 85 41.2
Atru.chr4.2612 Acer truncatum HOM05D000107 ORTHO05D000062 1.7e-07 59.3 80 41.2
Rhsim13G0141700 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.7e-07 59.3 80 42.5
EL10Ac9g22692 Beta vulgaris HOM05D000107 ORTHO05D000062 2.3e-07 58.9 89 37.1
Lj2g0003377 Lotus japonicus HOM05D000107 ORTHO05D000062 2.3e-07 58.9 83 39.8
Lj4g0021587 Lotus japonicus HOM05D000107 ORTHO05D000062 2.3e-07 58.9 83 39.8
AUR62037786 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.9e-07 58.5 87 35.6
HanXRQChr05g0141801 Helianthus annuus HOM05D000107 ORTHO05D000062 2.9e-07 58.5 88 38.6
Psat2g072600 Pisum sativum HOM05D000107 ORTHO05D000062 2.9e-07 58.5 82 36.6
TAR472G0001 Trochodendron aralioides HOM05D000107 ORTHO05D000062 2.9e-07 58.5 45 53.3
Atru.chr1.768 Acer truncatum HOM05D000107 ORTHO05D000062 3.9e-07 58.2 80 41.2
Psat3g029000 Pisum sativum HOM05D000107 ORTHO05D000062 3.9e-07 58.2 82 35.4
TAR137G0001 Trochodendron aralioides HOM05D000107 ORTHO05D000062 3.9e-07 58.2 80 38.8
Psat3g187240 Pisum sativum HOM05D000107 ORTHO05D000062 5.0e-07 57.8 82 36.6
AUR62015626 Chenopodium quinoa HOM05D000107 ORTHO05D000062 6.6e-07 57.4 87 37.9
AUR62038390 Chenopodium quinoa HOM05D000107 ORTHO05D000062 6.6e-07 57.4 89 39.3
Rhsim05G0137300 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.6e-07 57.4 77 41.6
EL10Ac2g03191 Beta vulgaris HOM05D000107 ORTHO05D000062 8.6e-07 57.0 84 35.7
AUR62029908 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.1e-06 56.6 80 38.8
AUR62034026 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.1e-06 56.6 89 38.2
Os08g0215300 Oryza sativa ssp. japonica HOM05D000107 ORTHO05D000062 1.1e-06 56.6 87 40.2
Solyc02g050190.2 Solanum lycopersicum HOM05D000107 ORTHO05D000062 1.1e-06 56.6 54 57.4
EL10Ac7g17964 Beta vulgaris HOM05D000107 ORTHO05D000062 1.5e-06 56.2 83 36.1
CANSAT01G1520 Cannabis sativa HOM05D000107 ORTHO05D000062 1.5e-06 56.2 83 42.2
CANSAT54G1396 Cannabis sativa HOM05D000107 ORTHO05D000062 1.5e-06 56.2 83 42.2
AUR62044231 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.5e-06 56.2 47 46.8
ECA096G0002 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.5e-06 56.2 41 61.0
SGA_v2.0_scaffold28G12020 Striga asiatica HOM05D000107 ORTHO05D000062 1.5e-06 56.2 86 36.0
TAR230G0002 Trochodendron aralioides HOM05D000107 ORTHO05D000062 1.5e-06 56.2 66 40.9
EL10Ac2g03073 Beta vulgaris HOM05D000107 ORTHO05D000062 2.5e-06 55.5 54 44.4
EL10Ac2g03559 Beta vulgaris HOM05D000107 ORTHO05D000062 2.5e-06 55.5 86 41.9
EL10Ac3g06532 Beta vulgaris HOM05D000107 ORTHO05D000062 2.5e-06 55.5 86 41.9
EL10Ac6g13586 Beta vulgaris HOM05D000107 ORTHO05D000062 2.5e-06 55.5 86 41.9
EL10Ac7g17163 Beta vulgaris HOM05D000107 ORTHO05D000062 2.5e-06 55.5 86 41.9
EL10Ac9g21064 Beta vulgaris HOM05D000107 ORTHO05D000062 2.5e-06 55.5 86 41.9
AUR62040733 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.5e-06 55.5 89 38.2
Rhsim05G0054900 Rhododendron simsii HOM05D004144 ORTHO05D004902 2.5e-06 55.5 37 62.2
TAR266G0002 Trochodendron aralioides HOM05D000107 ORTHO05D000062 2.5e-06 55.5 82 40.2
Ah.13g065570 Amaranthus hybridus HOM05D000107 ORTHO05D000062 3.3e-06 55.1 75 34.7
EL10Ac3g06415 Beta vulgaris HOM05D001385 ORTHO05D008760 3.3e-06 55.1 58 48.3
EL10Ac6g14362 Beta vulgaris HOM05D000107 ORTHO05D000062 3.3e-06 55.1 48 50.0
CANSAT54G0813 Cannabis sativa HOM05D000107 ORTHO05D000062 3.3e-06 55.1 87 40.2
EL10Ac2g03098 Beta vulgaris HOM05D000107 ORTHO05D000062 4.3e-06 54.7 88 34.1
EL10Ac4g08903 Beta vulgaris HOM05D000107 ORTHO05D000062 4.3e-06 54.7 88 34.1
AUR62028444 Chenopodium quinoa HOM05D000107 ORTHO05D000062 4.3e-06 54.7 89 38.2
ECA248G1771 Erigeron canadensis HOM05D000006 ORTHO05D000001 4.3e-06 54.7 75 46.7
FvH4_3g32802 Fragaria vesca HOM05D000107 ORTHO05D000062 4.3e-06 54.7 83 42.2
Hma1.2p1_0811F.1_g222120 Hydrangea macrophylla HOM05D000107 ORTHO05D000062 4.3e-06 54.7 85 38.8
Ah.04g158600 Amaranthus hybridus HOM05D000107 ORTHO05D000062 5.6e-06 54.3 75 34.7
CANSAT21G0779 Cannabis sativa HOM05D000107 ORTHO05D000062 5.6e-06 54.3 85 40.0
Ca_03597_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 5.6e-06 54.3 74 44.6
ECA164G0001 Erigeron canadensis HOM05D000107 ORTHO05D000062 5.6e-06 54.3 74 47.3
ECA233G5567 Erigeron canadensis HOM05D000107 ORTHO05D000062 5.6e-06 54.3 74 47.3
ECA246G3624 Erigeron canadensis HOM05D000107 ORTHO05D000062 5.6e-06 54.3 74 47.3
ECA247G3079 Erigeron canadensis HOM05D000097 ORTHO05D000041 5.6e-06 54.3 74 47.3
QL11p017511 Quercus lobata HOM05D020237 ORTHO05D000062 5.6e-06 54.3 83 41.0
Rhsim03G0123300 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.6e-06 54.3 86 36.0
SGA_v2.0_scaffold623G53233 Striga asiatica HOM05D000107 ORTHO05D000062 5.6e-06 54.3 86 33.7
EL10Ac2g03817 Beta vulgaris HOM05D000107 ORTHO05D000062 7.3e-06 53.9 89 37.1
EL10Ac6g14370 Beta vulgaris HOM05D000107 ORTHO05D000062 7.3e-06 53.9 90 40.0
AUR62036835 Chenopodium quinoa HOM05D000107 ORTHO05D000062 7.3e-06 53.9 88 38.6
AUR62038387 Chenopodium quinoa HOM05D000107 ORTHO05D000062 7.3e-06 53.9 89 38.2
PSO566G0060 Papaver somniferum HOM05D000107 ORTHO05D000062 7.3e-06 53.9 82 37.8
Rhsim02G0050400 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.3e-06 53.9 86 38.4
RcHm_v2.0_Chr4g0436001 Rosa chinensis HOM05D000107 ORTHO05D000062 7.3e-06 53.9 84 38.1
SGA_v2.0_scaffold11G05530 Striga asiatica HOM05D000107 ORTHO05D000062 7.3e-06 53.9 86 34.9
EL10Ac1g02214 Beta vulgaris HOM05D000107 ORTHO05D000062 9.5e-06 53.5 83 34.9
CANSAT11G2258 Cannabis sativa HOM05D000107 ORTHO05D000062 9.5e-06 53.5 81 33.3
AUR62027660 Chenopodium quinoa HOM05D000107 ORTHO05D000062 9.5e-06 53.5 48 52.1
Ca_13991_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 9.5e-06 53.5 74 45.9
ECA236G2248 Erigeron canadensis HOM05D000107 ORTHO05D000062 9.5e-06 53.5 62 51.6


User provided reference genes

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