Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g15563 Nelumbo nucifera HOM05D000613 ORTHO05D000446 2.1e-73 278.9 137 100.0
Nn7g38261 Nelumbo nucifera HOM05D000613 ORTHO05D000446 2.2e-49 199.1 113 90.3
TAR633G1306 Trochodendron aralioides HOM05D000613 ORTHO05D000446 1.8e-27 126.3 113 62.8
PSO443G0071 Papaver somniferum HOM05D000613 ORTHO05D000446 4.1e-24 115.2 113 59.3
Dinv12513 Davidia involucrata HOM05D000613 ORTHO05D000446 2.0e-23 112.8 114 55.3
Dinv29436 Davidia involucrata HOM05D000613 ORTHO05D000446 4.5e-23 111.7 115 54.8
Ciclev10028244m.g Citrus clementina HOM05D000613 ORTHO05D000446 5.9e-23 111.3 113 54.0
Hma1.2p1_0695F.1_g204450 Hydrangea macrophylla HOM05D000613 ORTHO05D000446 7.7e-23 110.9 113 54.9
PSO384G3251 Papaver somniferum HOM05D000613 ORTHO05D000446 1.7e-22 109.8 113 53.1
Thhalv10016598m.g Eutrema salsugineum HOM05D000613 ORTHO05D000446 2.9e-22 109.0 113 53.1
AT2G27760 Arabidopsis thaliana HOM05D000613 ORTHO05D000446 1.1e-21 107.1 113 53.1
CSS0044985 Camellia sinensis var. sinensis HOM05D000613 ORTHO05D000446 1.1e-21 107.1 115 50.4
Atru.chr3.3360 Acer truncatum HOM05D000613 ORTHO05D000446 2.5e-21 105.9 113 52.2
AL4G22540 Arabidopsis lyrata HOM05D000613 ORTHO05D000446 3.2e-21 105.5 113 53.1
QL01p013431 Quercus lobata HOM05D000613 ORTHO05D000446 4.2e-21 105.1 113 52.2
Thecc.09G290100 Theobroma cacao HOM05D000613 ORTHO05D000446 5.5e-21 104.8 113 54.0
Gohir.D09G093500 Gossypium hirsutum HOM05D000613 ORTHO05D000446 1.2e-20 103.6 113 53.1
Gorai.006G110100 Gossypium raimondii HOM05D000613 ORTHO05D000446 1.6e-20 103.2 113 53.1
CANSAT54G1868 Cannabis sativa HOM05D000613 ORTHO05D000446 2.7e-20 102.4 116 51.7
Cpa.g.sc47.71 Carica papaya HOM05D000613 ORTHO05D000446 3.6e-20 102.1 113 52.2
vmacro14361 Vaccinium macrocarpon HOM05D000613 ORTHO05D000446 4.7e-20 101.7 114 48.2
COL.COLO4_19960 Corchorus olitorius HOM05D000613 ORTHO05D000446 8.0e-20 100.9 113 54.0
Carub.0004s0851 Capsella rubella HOM05D000613 ORTHO05D000446 1.0e-19 100.5 113 50.4
CiPaw.13G140000 Carya illinoinensis HOM05D000613 ORTHO05D000446 1.4e-19 100.1 113 49.6
THA.LOC104800550 Tarenaya hassleriana HOM05D000613 ORTHO05D000446 1.4e-19 100.1 113 47.8
Manes.11G158700 Manihot esculenta HOM05D000613 ORTHO05D000446 2.3e-19 99.4 116 51.7
Sabra09G0113800 Salix brachista HOM05D000613 ORTHO05D000446 2.3e-19 99.4 113 49.6
Sabra09G0116300 Salix brachista HOM05D000613 ORTHO05D000446 2.3e-19 99.4 113 49.6
GSVIVG01031386001 Vitis vinifera HOM05D000613 ORTHO05D000446 2.3e-19 99.4 113 50.4
Aa31LG5G8240 Aethionema arabicum HOM05D000613 ORTHO05D000446 3.0e-19 99.0 113 47.8
Duzib150G1136 Durio zibethinus HOM05D000613 ORTHO05D000446 3.0e-19 99.0 113 50.4
Potri.009G147600 Populus trichocarpa HOM05D000613 ORTHO05D000446 4.0e-19 98.6 113 49.6
Prupe.6G120800 Prunus persica HOM05D000613 ORTHO05D000446 5.2e-19 98.2 114 52.6
Rhsim01G0207200 Rhododendron simsii HOM05D000613 ORTHO05D000446 5.2e-19 98.2 113 48.7
A04p21110 Brassica napus HOM05D000613 ORTHO05D000446 6.8e-19 97.8 113 48.7
Sp4g10590 Schrenkiella parvula HOM05D000613 ORTHO05D000446 6.8e-19 97.8 113 49.6
BcaC02g08231 Brassica carinata HOM05D000613 ORTHO05D000446 1.5e-18 96.7 113 48.7
C04p56910 Brassica napus HOM05D000613 ORTHO05D000446 1.5e-18 96.7 113 48.7
BolC4t27227H Brassica oleracea HOM05D000613 ORTHO05D000446 1.5e-18 96.7 113 48.7
BraA04t17680Z Brassica rapa HOM05D000613 ORTHO05D000446 2.6e-18 95.9 113 47.8
TWI31G0082 Tripterygium wilfordii HOM05D000613 ORTHO05D000446 3.4e-18 95.5 113 49.6
Aqoxy2G01362 Aquilegia oxysepala HOM05D000613 ORTHO05D000446 5.7e-18 94.7 117 51.3
DCAR_012174 Daucus carota HOM05D000613 ORTHO05D000446 5.7e-18 94.7 113 47.8
MD03G1136100 Malus domestica HOM05D000613 ORTHO05D000446 5.7e-18 94.7 116 49.1
CARHR120460 Cardamine hirsuta HOM05D000613 ORTHO05D000446 7.5e-18 94.4 114 49.1
FAN11G3077 Fragaria x ananassa HOM05D000613 ORTHO05D000446 9.7e-18 94.0 113 46.0
BcaB06g28166 Brassica carinata HOM05D000613 ORTHO05D000446 1.7e-17 93.2 113 49.6
Lalb_Chr03g0027961 Lupinus albus HOM05D000613 ORTHO05D000446 2.2e-17 92.8 116 48.3
PGR119G0205 Punica granatum HOM05D000613 ORTHO05D000446 2.2e-17 92.8 113 46.9
AUR62038117 Chenopodium quinoa HOM05D000613 ORTHO05D000446 4.8e-17 91.7 113 47.8
Oeu058280.1 Olea europaea HOM05D000613 ORTHO05D000446 4.8e-17 91.7 113 52.2
AUR62009805 Chenopodium quinoa HOM05D000613 ORTHO05D000446 1.1e-16 90.5 113 48.7
AUR62043078 Chenopodium quinoa HOM05D000613 ORTHO05D000446 1.1e-16 90.5 113 46.9
Eucgr.J00446 Eucalyptus grandis HOM05D000613 ORTHO05D000446 1.1e-16 90.5 113 48.7
Sed0023377 Sechium edule HOM05D000613 ORTHO05D000446 1.1e-16 90.5 114 48.2
Hund18732 Selenicereus undatus HOM05D000613 ORTHO05D000446 1.1e-16 90.5 113 50.4
ECA248G3409 Erigeron canadensis HOM05D000613 ORTHO05D000446 1.4e-16 90.1 115 46.1
FvH4_3g29650 Fragaria vesca HOM05D000613 ORTHO05D000446 2.4e-16 89.4 113 45.1
Peaxi162Scf00002g05433 Petunia axillaris HOM05D000613 ORTHO05D000446 2.4e-16 89.4 113 47.8
RcHm_v2.0_Chr5g0055011 Rosa chinensis HOM05D000613 ORTHO05D000446 3.1e-16 89.0 113 46.0
PGSC0003DMG400026541 Solanum tuberosum HOM05D000613 ORTHO05D000446 4.1e-16 88.6 113 44.2
VMungo1127G1578 Vigna mungo HOM05D000613 ORTHO05D000446 4.1e-16 88.6 116 45.7
Phvul.011G091500 Phaseolus vulgaris HOM05D000613 ORTHO05D000446 5.3e-16 88.2 116 45.7
TPR.G15581 Trifolium pratense HOM05D000613 ORTHO05D000446 7.0e-16 87.8 117 47.0
FAN16G0170 Fragaria x ananassa HOM05D000613 ORTHO05D000446 9.1e-16 87.4 113 44.2
HPP92_009047 Vanilla planifolia HOM05D000613 ORTHO05D000446 1.2e-15 87.0 113 43.4
FAN25G2504 Fragaria x ananassa HOM05D000613 ORTHO05D000446 1.6e-15 86.7 113 44.2
Lj3g0004331 Lotus japonicus HOM05D000613 ORTHO05D000446 1.6e-15 86.7 116 45.7
arahy.Tifrunner.gnm1.ann1.013JYW Arachis hypogaea HOM05D000613 ORTHO05D000446 2.0e-15 86.3 116 46.6
Medtr4g055110 Medicago truncatula HOM05D000613 ORTHO05D000446 2.0e-15 86.3 117 46.2
CAN.G644.22 Capsicum annuum HOM05D000613 ORTHO05D000446 4.5e-15 85.1 113 43.4
Ca_19380_v3 Cicer arietinum L. HOM05D000613 ORTHO05D000446 5.9e-15 84.7 114 47.4
Sopen11g026680 Solanum pennellii HOM05D000613 ORTHO05D000446 5.9e-15 84.7 113 42.5
SGA_v2.0_scaffold27G11624 Striga asiatica HOM05D000613 ORTHO05D000446 7.7e-15 84.3 111 45.0
Solyc11g066960.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.7e-14 83.2 113 42.5
MELO3C004783.2 Cucumis melo HOM05D000613 ORTHO05D000446 2.9e-14 82.4 113 43.4
Sc21g0004740 Simmondsia chinensis HOM05D000613 ORTHO05D000446 2.9e-14 82.4 146 39.7
EL10Ac7g15781 Beta vulgaris HOM05D000613 ORTHO05D000446 3.8e-14 82.0 113 42.5
Eucgr.J00445 Eucalyptus grandis HOM05D000613 ORTHO05D000446 5.0e-14 81.6 113 45.1
HanXRQChr11g0345911 Helianthus annuus HOM05D000613 ORTHO05D000446 6.5e-14 81.3 113 48.7
Nitab4.5_0011810g0010 Nicotiana tabacum HOM05D000613 ORTHO05D000446 8.5e-14 80.9 113 45.1
Psat7g189920 Pisum sativum HOM05D000613 ORTHO05D000446 8.5e-14 80.9 116 47.4
Glyma.11G188100 Glycine max HOM05D000613 ORTHO05D000446 1.1e-13 80.5 116 42.2
Nitab4.5_0006089g0050 Nicotiana tabacum HOM05D000613 ORTHO05D000446 5.5e-13 78.2 113 43.4
ATR1096G040 Amborella trichopoda HOM05D000613 ORTHO05D000446 7.2e-13 77.8 113 44.2
Cc01_g09670 Coffea canephora HOM05D000613 ORTHO05D000446 7.2e-13 77.8 114 43.9
CsaV3_1G014570 Cucumis sativus L. HOM05D000613 ORTHO05D000446 7.2e-13 77.8 113 44.2
SalBow6G3775 Salvia bowleyana HOM05D000613 ORTHO05D000446 1.6e-12 76.6 113 40.7
SalBow7G2121 Salvia bowleyana HOM05D000613 ORTHO05D000446 1.6e-12 76.6 113 40.7
ClCG01G012600 Citrullus lanatus HOM05D000613 ORTHO05D000446 2.7e-12 75.9 113 42.5
Migut.D02360 Erythranthe guttata HOM05D000613 ORTHO05D000446 3.6e-12 75.5 113 43.4
unitig_747.g21951 Utricularia gibba HOM05D000613 ORTHO05D000446 3.6e-12 75.5 113 39.8
Lsat_1_v5_gn_1_62120 Lactuca sativa HOM05D000613 ORTHO05D000446 1.4e-11 73.6 113 45.1
MBI17_g19797_MAGBIO Magnolia biondii HOM05D000613 ORTHO05D000446 4.1e-08 62.0 114 42.1
SHI06113 Sapria himalayana HOM05D000613 ORTHO05D000446 7.0e-08 61.2 107 41.1
Zm00001eb139980 Zea mays HOM05D000613 ORTHO05D000446 1.2e-07 60.5 114 37.7
CDE08G1328 Ceratophyllum demersum HOM05D000613 ORTHO05D000446 4.5e-07 58.5 48 60.4
Phvul.006G154200 Phaseolus vulgaris HOM05D000613 ORTHO05D000446 8.6e-06 54.3 44 59.1


User provided reference genes

Program Settings