Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g15532 Nelumbo nucifera HOM05D006205 ORTHO05D007703 1.2e-233 812.8 398 100.0
TAR623G1003 Trochodendron aralioides HOM05D006205 ORTHO05D007703 2.7e-193 678.7 360 90.6
CSS0013544 Camellia sinensis var. sinensis HOM05D006205 ORTHO05D007703 3.5e-193 678.3 360 90.3
Dinv24098 Davidia involucrata HOM05D006205 ORTHO05D007703 2.3e-192 675.6 360 89.7
Actinidia17259 Actinidia chinensis HOM05D006205 ORTHO05D007703 3.0e-192 675.2 360 89.4
Gorai.002G228500 Gossypium raimondii HOM05D006205 ORTHO05D007703 5.6e-191 671.0 360 88.1
Gohir.A01G194800 Gossypium hirsutum HOM05D006205 ORTHO05D007703 1.6e-190 669.5 360 87.8
Hma1.2p1_1575F.1_g291620 Hydrangea macrophylla HOM05D006205 ORTHO05D007703 1.1e-189 666.8 358 87.7
PGR142G1368 Punica granatum HOM05D006205 ORTHO05D007703 1.4e-189 666.4 360 87.5
Duzib106G0917 Durio zibethinus HOM05D006205 ORTHO05D007703 2.4e-189 665.6 360 87.8
Gohir.D01G185000 Gossypium hirsutum HOM05D006205 ORTHO05D007703 1.5e-188 662.9 360 87.2
Prupe.7G072500 Prunus persica HOM05D006205 ORTHO05D007703 2.0e-188 662.5 360 87.8
Ciclev10031918m.g Citrus clementina HOM05D006205 ORTHO05D007703 3.4e-188 661.8 358 87.4
Hund19180 Selenicereus undatus HOM05D006205 ORTHO05D007703 4.4e-188 661.4 360 87.8
Eucgr.K01821 Eucalyptus grandis HOM05D006205 ORTHO05D007703 9.9e-188 660.2 360 86.9
Haze_19942 Corylus avellana HOM05D006205 ORTHO05D007703 2.2e-187 659.1 356 88.8
Thecc.05G167100 Theobroma cacao HOM05D006205 ORTHO05D007703 4.9e-187 657.9 360 86.9
Ca_08497_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 8.4e-187 657.1 360 86.7
Ca_29722_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 8.4e-187 657.1 360 86.7
CiPaw.09G032800 Carya illinoinensis HOM05D006205 ORTHO05D007703 1.9e-186 656.0 358 88.0
Phvul.001G139800 Phaseolus vulgaris HOM05D006205 ORTHO05D007703 5.4e-186 654.4 360 86.4
QL07p022686 Quercus lobata HOM05D006205 ORTHO05D007703 5.4e-186 654.4 358 87.7
Manes.09G031300 Manihot esculenta HOM05D006205 ORTHO05D007703 7.1e-186 654.1 360 85.8
Lju124A32T75 Lonicera japonica HOM05D006205 ORTHO05D007703 9.3e-186 653.7 360 86.1
MSTRG.26097 Avicennia marina HOM05D006205 ORTHO05D007703 1.2e-185 653.3 360 86.1
Duzib093G1988 Durio zibethinus HOM05D006205 ORTHO05D007703 1.2e-185 653.3 360 85.8
Glyma.19G144900 Glycine max HOM05D006205 ORTHO05D007703 3.5e-185 651.7 361 85.9
Potri.016G049700 Populus trichocarpa HOM05D006205 ORTHO05D007703 3.5e-185 651.7 360 85.6
DCAR_013564 Daucus carota HOM05D006205 ORTHO05D007703 4.6e-185 651.4 357 86.3
Cpa.g.sc85.111 Carica papaya HOM05D006205 ORTHO05D007703 6.0e-185 651.0 360 87.5
TPR.G4691 Trifolium pratense HOM05D006205 ORTHO05D007703 6.0e-185 651.0 360 85.6
Potri.006G058400 Populus trichocarpa HOM05D006205 ORTHO05D007703 2.3e-184 649.0 360 85.3
arahy.Tifrunner.gnm1.ann1.ARGW3J Arachis hypogaea HOM05D006205 ORTHO05D007703 3.0e-184 648.7 357 86.0
Sabra16G0053600 Salix brachista HOM05D006205 ORTHO05D007703 5.1e-184 647.9 360 84.2
arahy.Tifrunner.gnm1.ann1.68EW5P Arachis hypogaea HOM05D006205 ORTHO05D007703 6.6e-184 647.5 357 85.7
VMungo1383G0076 Vigna mungo HOM05D006205 ORTHO05D007703 1.9e-183 646.0 360 84.7
Psat3g069960 Pisum sativum HOM05D006205 ORTHO05D007703 4.3e-183 644.8 359 85.2
THA.LOC104809921 Tarenaya hassleriana HOM05D006205 ORTHO05D007703 7.3e-183 644.0 357 85.2
vmacro09103 Vaccinium macrocarpon HOM05D006205 ORTHO05D007703 7.3e-183 644.0 370 84.6
Nitab4.5_0006846g0010 Nicotiana tabacum HOM05D006205 ORTHO05D007703 1.3e-182 643.3 360 83.6
Sc25g0005160 Simmondsia chinensis HOM05D006205 ORTHO05D007703 1.3e-182 643.3 358 84.6
Lalb_Chr18g0047621 Lupinus albus HOM05D006205 ORTHO05D007703 1.6e-182 642.9 360 85.3
EL10Ac3g06974 Beta vulgaris HOM05D006205 ORTHO05D007703 2.1e-182 642.5 360 85.3
Medtr7g092680 Medicago truncatula HOM05D006205 ORTHO05D007703 2.1e-182 642.5 360 84.7
Aqoxy1G00212 Aquilegia oxysepala HOM05D006205 ORTHO05D007703 4.8e-182 641.3 358 83.2
Sabra06G0041700 Salix brachista HOM05D006205 ORTHO05D007703 6.2e-182 641.0 360 84.4
SGA_v2.0_scaffold94G28443 Striga asiatica HOM05D006205 ORTHO05D007703 6.2e-182 641.0 361 85.0
Lsat_1_v5_gn_8_79241 Lactuca sativa HOM05D006205 ORTHO05D007703 8.1e-182 640.6 360 83.9
CAN.G85.9 Capsicum annuum HOM05D006205 ORTHO05D007703 1.4e-181 639.8 360 83.9
FvH4_6g22800 Fragaria vesca HOM05D006205 ORTHO05D007703 4.0e-181 638.3 358 85.5
FAN14G5729 Fragaria x ananassa HOM05D006205 ORTHO05D007703 4.0e-181 638.3 358 85.5
RcHm_v2.0_Chr3g0480421 Rosa chinensis HOM05D006205 ORTHO05D007703 4.0e-181 638.3 358 85.5
FAN02G0014 Fragaria x ananassa HOM05D006205 ORTHO05D007703 6.9e-181 637.5 358 85.2
FAN05G5560 Fragaria x ananassa HOM05D006205 ORTHO05D007703 1.2e-180 636.7 358 85.5
Sed0025317 Sechium edule HOM05D006205 ORTHO05D007703 1.2e-180 636.7 360 84.4
CANSAT64G2514 Cannabis sativa HOM05D006205 ORTHO05D007703 1.5e-180 636.3 356 85.1
MELO3C009648.2 Cucumis melo HOM05D006205 ORTHO05D007703 2.0e-180 636.0 386 80.1
PGSC0003DMG400012937 Solanum tuberosum HOM05D006205 ORTHO05D007703 1.7e-179 632.9 360 82.5
PSO384G4504 Papaver somniferum HOM05D006205 ORTHO05D007703 3.8e-179 631.7 356 83.7
Lj1g0022121 Lotus japonicus HOM05D006205 ORTHO05D007703 4.9e-179 631.3 395 78.2
AUR62024356 Chenopodium quinoa HOM05D006205 ORTHO05D007703 1.1e-178 630.2 360 83.6
CDE10G0043 Ceratophyllum demersum HOM05D006205 ORTHO05D007703 1.9e-178 629.4 356 84.6
Cc06_g16310 Coffea canephora HOM05D006205 ORTHO05D007703 1.9e-178 629.4 358 82.4
ATR0605G163 Amborella trichopoda HOM05D006205 ORTHO05D007703 2.4e-178 629.0 356 83.7
Migut.K00057 Erythranthe guttata HOM05D006205 ORTHO05D007703 2.4e-178 629.0 360 83.3
QL93p2022_0017 Quercus lobata HOM05D006205 ORTHO05D007703 5.4e-178 627.9 416 75.5
HanXRQChr05g0132791 Helianthus annuus HOM05D006205 ORTHO05D007703 7.1e-178 627.5 358 82.4
TWI74G1063 Tripterygium wilfordii HOM05D006205 ORTHO05D007703 7.1e-178 627.5 339 87.9
Solyc03g064030.3 Solanum lycopersicum HOM05D006205 ORTHO05D007703 9.3e-178 627.1 360 81.9
PSO339G0108 Papaver somniferum HOM05D006205 ORTHO05D007703 2.7e-177 625.5 357 82.9
SalBow1G2518 Salvia bowleyana HOM05D006205 ORTHO05D007703 1.8e-176 622.9 400 76.0
Sopen03g017680 Solanum pennellii HOM05D006205 ORTHO05D007703 1.8e-176 622.9 360 81.1
Sp3g10390 Schrenkiella parvula HOM05D006205 ORTHO05D007703 2.3e-176 622.5 357 81.8
ClCG10G017350 Citrullus lanatus HOM05D006205 ORTHO05D007703 1.5e-175 619.8 427 72.8
AL3G23830 Arabidopsis lyrata HOM05D006205 ORTHO05D007703 1.9e-175 619.4 357 81.0
Carub.0003s1152 Capsella rubella HOM05D006205 ORTHO05D007703 5.6e-175 617.8 357 81.2
AT3G12150 Arabidopsis thaliana HOM05D006205 ORTHO05D007703 7.4e-175 617.5 355 82.0
A05p37150 Brassica napus HOM05D006205 ORTHO05D007703 6.2e-174 614.4 355 81.1
C05p55580 Brassica napus HOM05D006205 ORTHO05D007703 6.2e-174 614.4 355 81.1
BolC5t34227H Brassica oleracea HOM05D006205 ORTHO05D007703 6.2e-174 614.4 355 81.1
BcaC05g29277 Brassica carinata HOM05D006205 ORTHO05D007703 8.1e-174 614.0 355 80.8
Thhalv10021002m.g Eutrema salsugineum HOM05D006205 ORTHO05D007703 1.4e-173 613.2 357 80.1
BraA05t22513Z Brassica rapa HOM05D006205 ORTHO05D007703 1.2e-172 610.1 355 80.3
AUR62025960 Chenopodium quinoa HOM05D006205 ORTHO05D007703 1.5e-172 609.8 360 81.7
BraA03t12906Z Brassica rapa HOM05D006205 ORTHO05D007703 1.9e-170 602.8 356 80.3
BcaC01g04062 Brassica carinata HOM05D006205 ORTHO05D007703 2.5e-170 602.4 356 80.3
A03p37470 Brassica napus HOM05D006205 ORTHO05D007703 7.1e-170 600.9 356 80.1
C03p45470 Brassica napus HOM05D006205 ORTHO05D007703 7.1e-170 600.9 358 79.9
Zm00001eb236370 Zea mays HOM05D006205 ORTHO05D007703 1.2e-169 600.1 365 77.0
BolC3t16816H Brassica oleracea HOM05D006205 ORTHO05D007703 2.1e-169 599.4 358 79.6
Aa31LG3G6360 Aethionema arabicum HOM05D006205 ORTHO05D007703 3.5e-169 598.6 386 74.6
Os02g0195000 Oryza sativa ssp. japonica HOM05D006205 ORTHO05D007703 7.9e-169 597.4 365 75.9
unitig_899.g15081 Utricularia gibba HOM05D006205 ORTHO05D007703 4.8e-166 588.2 358 79.1
GSVIVG01033369001 Vitis vinifera HOM05D006205 ORTHO05D007703 8.2e-166 587.4 316 89.2
SEGI_33856 Sequoiadendron giganteum HOM05D006205 ORTHO05D007703 3.4e-164 582.0 354 77.7
BcaB04g18694 Brassica carinata HOM05D006205 ORTHO05D007703 6.9e-157 557.8 336 78.3
Nitab4.5_0000016g0140 Nicotiana tabacum HOM05D006205 ORTHO05D007703 3.2e-154 548.9 360 73.9
Cfa016888 Carpinus fangiana HOM05D006205 ORTHO05D007703 2.1e-153 546.2 301 88.0
ECA236G0538 Erigeron canadensis HOM05D006205 ORTHO05D007703 1.1e-151 540.4 316 82.6
MD12G1062300 Malus domestica HOM05D006205 ORTHO05D007703 6.3e-150 534.6 305 85.2
SMO334G0020 Selaginella moellendorffii HOM05D006205 ORTHO05D007703 1.4e-144 516.9 354 69.5
Rhsim04G0098500 Rhododendron simsii HOM05D006205 ORTHO05D007703 3.0e-144 515.8 402 66.4
Mapoly0096s0035 Marchantia polymorpha HOM05D006205 ORTHO05D007703 3.3e-143 512.3 354 68.9
Ah.13g076130 Amaranthus hybridus HOM05D006205 ORTHO05D007703 7.4e-143 511.1 352 72.7
Pp3c3_27370 Physcomitrium patens HOM05D006205 ORTHO05D007703 1.5e-138 496.9 354 66.4
AagrBONN_evm.TU.Sc2ySwM_228.3151 Anthoceros agrestis HOM05D006205 ORTHO05D007703 2.5e-138 496.1 355 67.6
CBR_g25855 Chara braunii HOM05D006205 ORTHO05D007703 7.7e-132 474.6 365 64.1
SalBow1G2557 Salvia bowleyana HOM05D006205 ORTHO05D007703 2.3e-128 463.0 364 65.7
CsaV3_3G039050 Cucumis sativus L. HOM05D006205 ORTHO05D007703 4.4e-127 458.8 252 87.7
Peaxi162Scf00285g00443 Petunia axillaris HOM05D006205 ORTHO05D007703 1.8e-125 453.4 360 64.4
COL.COLO4_36119 Corchorus olitorius HOM05D006205 ORTHO05D007703 7.0e-125 451.4 241 90.5
HPP92_023778 Vanilla planifolia HOM05D006205 ORTHO05D007703 8.6e-115 417.9 239 82.8
Dinv18116 Davidia involucrata HOM05D006205 ORTHO05D007703 1.3e-107 394.0 209 89.0
CARHR086730 Cardamine hirsuta HOM05D006205 ORTHO05D007703 7.8e-100 368.2 205 85.4
Glyma.02G176500 Glycine max HOM05D006205 ORTHO05D007703 1.1e-72 278.1 164 82.9
MBI04_g47239_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 6.4e-70 268.9 151 81.5
MBI04_g14269_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 1.3e-62 244.6 160 73.8
Actinidia33641 Actinidia chinensis HOM05D006205 ORTHO05D007703 1.6e-57 227.6 121 83.5
MD14G1062900 Malus domestica HOM05D006205 ORTHO05D007703 1.7e-54 217.6 125 81.6
Cre02.g076150 Chlamydomonas reinhardtii HOM05D006205 ORTHO05D007703 4.5e-47 193.0 324 37.3
MD14G1062700 Malus domestica HOM05D006205 ORTHO05D007703 1.7e-46 191.0 207 51.2
VMungo1080G0431 Vigna mungo HOM05D006205 ORTHO05D007703 2.5e-37 160.6 98 81.6
arahy.Tifrunner.gnm1.ann1.EV0IJD Arachis hypogaea HOM05D006205 ORTHO05D007703 2.4e-32 144.1 117 65.0
MD12G1062200 Malus domestica HOM05D006205 ORTHO05D007703 1.3e-25 121.7 59 89.8
VMungo0331G0486 Vigna mungo HOM05D006205 ORTHO05D007703 1.7e-25 121.3 111 59.5
Medtr0001s0010 Medicago truncatula HOM05D006205 ORTHO05D007703 7.5e-18 95.9 79 63.3
Rhsim04G0098400 Rhododendron simsii HOM05D000259 ORTHO05D000155 1.2e-15 88.6 39 94.9
Glyma.02G176400 Glycine max HOM05D006205 ORTHO05D007703 1.1e-13 82.0 51 68.6
BcaC01g04094 Brassica carinata HOM05D001227 ORTHO05D001082 3.6e-12 77.0 162 35.2
MCO07G325 Micromonas commoda HOM05D006205 ORTHO05D007703 1.1e-08 65.5 233 28.3


User provided reference genes

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