Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g15525 Nelumbo nucifera HOM05D006604 ORTHO05D007974 1.1e-26 122.5 60 100.0
Nn1g10085 Nelumbo nucifera HOM05D006604 ORTHO05D007974 4.7e-25 117.1 57 100.0
Aqoxy12s025 Aquilegia oxysepala HOM05D006604 ORTHO05D007974 8.0e-25 116.3 57 98.2
Aqoxy1G02966 Aquilegia oxysepala HOM05D006604 ORTHO05D007974 8.0e-25 116.3 57 98.2
LjContig00439g0024190 Lotus japonicus HOM05D006604 ORTHO05D007974 1.2e-23 112.5 57 96.5
LjContig00439g0025482 Lotus japonicus HOM05D006604 ORTHO05D007974 1.2e-23 112.5 57 96.5
CsaV3_UNG209110 Cucumis sativus L. HOM05D006604 ORTHO05D007974 2.6e-23 111.3 57 96.5
Nn7g37740 Nelumbo nucifera HOM05D006604 ORTHO05D007974 2.6e-23 111.3 56 98.2
SGA_v2.0_scaffold245G44658 Striga asiatica HOM05D006604 ORTHO05D007974 3.4e-23 110.9 57 94.7
SHI41364 Sapria himalayana HOM05D006604 ORTHO05D007974 9.8e-23 109.4 57 93.0
SHI42031 Sapria himalayana HOM05D006604 ORTHO05D007974 9.8e-23 109.4 57 93.0
DCAR_032438 Daucus carota HOM05D006604 ORTHO05D007974 1.7e-22 108.6 57 93.0
RcHm_v2.0_Chr6g0256721 Rosa chinensis HOM05D006604 ORTHO05D007974 1.7e-22 108.6 57 93.0
RcHm_v2.0_MTg0498771 Rosa chinensis HOM05D006604 ORTHO05D007974 1.7e-22 108.6 57 93.0
SHI54324 Sapria himalayana HOM05D006604 ORTHO05D007974 1.7e-22 108.6 57 93.0
FAN20G1951 Fragaria x ananassa HOM05D006604 ORTHO05D007974 2.9e-22 107.8 57 89.5
SHI54304 Sapria himalayana HOM05D006604 ORTHO05D007974 2.9e-22 107.8 57 91.2
arahy.Tifrunner.gnm1.ann1.KE43QT Arachis hypogaea HOM05D002660 ORTHO05D007974 6.4e-22 106.7 57 91.2
arahy.Tifrunner.gnm1.ann1.QE4HQU Arachis hypogaea HOM05D002660 ORTHO05D007974 6.4e-22 106.7 57 91.2
SHI50293 Sapria himalayana HOM05D006604 ORTHO05D007974 6.4e-22 106.7 57 89.5
Sed0019535 Sechium edule HOM05D006604 ORTHO05D007974 6.4e-22 106.7 57 91.2
CAN.G659.3 Capsicum annuum HOM05D006604 ORTHO05D007974 8.3e-22 106.3 57 93.0
SHI53023 Sapria himalayana HOM05D006604 ORTHO05D007974 8.3e-22 106.3 57 91.2
MELO3C027524.2 Cucumis melo HOM05D006604 ORTHO05D007974 1.9e-21 105.1 57 87.7
Glyma.16G133700 Glycine max HOM05D006604 ORTHO05D007974 1.9e-21 105.1 57 89.5
Nitab4.5_0006806g0110 Nicotiana tabacum HOM05D006604 ORTHO05D007974 1.9e-21 105.1 57 93.0
PGR028G0012 Punica granatum HOM05D006604 ORTHO05D007974 2.4e-21 104.8 57 91.2
MELO3C027032.2 Cucumis melo HOM05D006604 ORTHO05D007974 3.2e-21 104.4 56 91.1
arahy.Tifrunner.gnm1.ann1.QPI8J1 Arachis hypogaea HOM05D006604 ORTHO05D007974 7.0e-21 103.2 57 89.5
RcHm_v2.0_Chr7g0231141 Rosa chinensis HOM05D006604 ORTHO05D007974 2.7e-20 101.3 56 89.3
MELO3C029409.2 Cucumis melo HOM05D006604 ORTHO05D007974 7.8e-20 99.8 56 87.5
Nn044s41811 Nelumbo nucifera HOM05D006604 ORTHO05D007974 3.9e-19 97.4 46 100.0
HanXRQChr11g0320231 Helianthus annuus HOM05D006604 ORTHO05D007974 5.0e-19 97.1 57 86.0
HanXRQMTg0579671 Helianthus annuus HOM05D006604 ORTHO05D007974 5.0e-19 97.1 57 86.0
HanXRQChr13g0388581 Helianthus annuus HOM05D006604 ORTHO05D007974 1.1e-18 95.9 57 84.2
Lalb_Chr00c29g0408041 Lupinus albus HOM05D006604 ORTHO05D007974 1.5e-18 95.5 57 84.2
CANSAT16G0041 Cannabis sativa HOM05D006604 ORTHO05D007974 2.5e-18 94.7 57 84.2
Lalb_Chr01g0011021 Lupinus albus HOM05D006604 ORTHO05D007974 4.3e-18 94.0 57 82.5
AT2G07741 Arabidopsis thaliana HOM05D006604 ORTHO05D007974 7.3e-18 93.2 57 84.2
ATMG00410 Arabidopsis thaliana HOM05D006604 ORTHO05D007974 7.3e-18 93.2 57 84.2
ATMG01170 Arabidopsis thaliana HOM05D006604 ORTHO05D007974 7.3e-18 93.2 57 84.2
CARHR282790 Cardamine hirsuta HOM05D006604 ORTHO05D007974 7.3e-18 93.2 57 84.2
CARHR283400 Cardamine hirsuta HOM05D006604 ORTHO05D007974 7.3e-18 93.2 57 84.2
Nitab4.5_0000859g0030 Nicotiana tabacum HOM05D006604 ORTHO05D007974 9.5e-18 92.8 57 84.2
SalBow1G2924 Salvia bowleyana HOM05D006604 ORTHO05D007974 1.2e-17 92.4 57 80.7
BcaB06g27871 Brassica carinata HOM05D006604 ORTHO05D007974 2.1e-17 91.7 57 82.5
BolSC28t60307H Brassica oleracea HOM05D006604 ORTHO05D007974 2.1e-17 91.7 57 82.5
BolSC28t60364H Brassica oleracea HOM05D006604 ORTHO05D007974 2.1e-17 91.7 57 82.5
BraSC177t45762Z Brassica rapa HOM05D006604 ORTHO05D007974 2.1e-17 91.7 57 82.5
BraSC48t46229Z Brassica rapa HOM05D006604 ORTHO05D007974 2.1e-17 91.7 57 82.5
BraSC48t46317Z Brassica rapa HOM05D006604 ORTHO05D007974 2.1e-17 91.7 57 82.5
BraSC54t46362Z Brassica rapa HOM05D006604 ORTHO05D007974 2.1e-17 91.7 57 82.5
CARHR288250 Cardamine hirsuta HOM05D006604 ORTHO05D007974 2.1e-17 91.7 57 82.5
SEGI_16408 Sequoiadendron giganteum HOM05D006604 ORTHO05D007974 4.4e-15 84.0 57 75.4
SEGI_09870 Sequoiadendron giganteum HOM05D006604 ORTHO05D007974 9.8e-15 82.8 57 75.4
SEGI_30085 Sequoiadendron giganteum HOM05D006604 ORTHO05D007974 9.8e-15 82.8 57 75.4
SEGI_38071 Sequoiadendron giganteum HOM05D006604 ORTHO05D007974 9.8e-15 82.8 57 75.4
SHI36697 Sapria himalayana HOM05D006604 ORTHO05D007974 7.1e-13 76.6 57 73.7
SHI50562 Sapria himalayana HOM05D006604 ORTHO05D007974 7.1e-13 76.6 57 73.7
Sp3g25850 Schrenkiella parvula HOM05D006604 ORTHO05D007974 7.1e-13 76.6 48 81.2
SHI36367 Sapria himalayana HOM05D006604 ORTHO05D007974 3.5e-12 74.3 57 71.9
SHI37564 Sapria himalayana HOM05D006604 ORTHO05D007974 3.0e-11 71.2 57 71.9
Nitab4.5_0002418g0090 Nicotiana tabacum HOM05D006604 ORTHO05D007974 1.1e-10 69.3 44 77.3
Lsat_1_v5_gn_5_16121 Lactuca sativa HOM05D006604 ORTHO05D007974 6.2e-09 63.5 53 69.8
SHI55017 Sapria himalayana HOM05D006604 ORTHO05D007974 8.1e-09 63.2 33 90.9
Lj2P1232T107 Lonicera japonica HOM05D006604 ORTHO05D007974 3.1e-08 61.2 29 100.0
ClCG06G009210 Citrullus lanatus HOM05D006604 ORTHO05D007974 5.2e-08 60.5 57 57.9
SHI28635 Sapria himalayana HOM05D006604 ORTHO05D007974 2.6e-07 58.2 57 59.6
ATR0392G001 Amborella trichopoda HOM05D006604 ORTHO05D007974 4.4e-07 57.4 57 59.6
SMO053G0007 Selaginella moellendorffii HOM05D006604 ORTHO05D007974 4.4e-07 57.4 58 55.2
Gorai.001G160500 Gossypium raimondii HOM05D006604 ORTHO05D007974 9.9e-07 56.2 57 61.4


User provided reference genes

Program Settings