Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g15515 Nelumbo nucifera HOM05D016165 ORTHO05D017374 2.7e-132 475.3 234 100.0
Nn2g15516 Nelumbo nucifera HOM05D016165 ORTHO05D017374 1.1e-90 337.0 234 70.9
Nn2g15517 Nelumbo nucifera HOM05D016165 ORTHO05D017374 1.1e-72 277.3 236 61.4
Nn2g15514 Nelumbo nucifera HOM05D016165 ORTHO05D017374 3.2e-69 265.8 235 59.1
Nn2g15518 Nelumbo nucifera HOM05D016165 ORTHO05D017374 3.3e-58 229.2 232 53.4
Nn2g15520 Nelumbo nucifera HOM05D016165 ORTHO05D017374 1.6e-52 210.3 216 52.3
Nn2g15519 Nelumbo nucifera HOM05D016165 ORTHO05D017374 1.5e-50 203.8 234 49.6
Aqoxy1G01699 Aquilegia oxysepala HOM05D016165 ORTHO05D017374 4.4e-18 95.9 231 32.5
Aqoxy6G02571 Aquilegia oxysepala HOM05D019941 ORTHO05D017374 1.6e-12 77.4 200 28.5
Carub.0007s3174 Capsella rubella HOM05D000218 ORTHO05D000125 3.1e-08 63.2 227 26.9
MELO3C025417.2 Cucumis melo HOM05D000218 ORTHO05D000125 4.5e-07 59.3 225 26.7
PSO017G3312 Papaver somniferum HOM05D000218 ORTHO05D000125 1.3e-06 57.8 225 26.7
AL1G63060 Arabidopsis lyrata HOM05D000218 ORTHO05D000125 1.7e-06 57.4 226 25.7
AT5G37640 Arabidopsis thaliana HOM05D000218 ORTHO05D000125 1.7e-06 57.4 226 26.5
BcaC05g28291 Brassica carinata HOM05D000218 ORTHO05D000125 1.7e-06 57.4 225 25.8
PSO729G0234 Papaver somniferum HOM05D000218 ORTHO05D000125 1.7e-06 57.4 203 26.1
CSS0027475 Camellia sinensis var. sinensis HOM05D000218 ORTHO05D000125 2.3e-06 57.0 225 26.7
Carub.0006s2219 Capsella rubella HOM05D000218 ORTHO05D000125 2.9e-06 56.6 225 26.2
Cc05_g13290 Coffea canephora HOM05D000218 ORTHO05D000125 2.9e-06 56.6 225 26.2
Gohir.D05G365200 Gossypium hirsutum HOM05D000218 ORTHO05D000125 2.9e-06 56.6 225 25.8
Prupe.2G185300 Prunus persica HOM05D000218 ORTHO05D000125 2.9e-06 56.6 200 26.5
AL6G35910 Arabidopsis lyrata HOM05D000218 ORTHO05D000125 3.8e-06 56.2 225 25.8
AUR62035392 Chenopodium quinoa HOM05D000218 ORTHO05D000125 3.8e-06 56.2 225 26.2
Gohir.A01G075100 Gossypium hirsutum HOM05D000218 ORTHO05D000125 3.8e-06 56.2 225 26.2
SEGI_11630 Sequoiadendron giganteum HOM05D000218 ORTHO05D000125 3.8e-06 56.2 225 25.8
SEGI_30490 Sequoiadendron giganteum HOM05D000218 ORTHO05D000125 3.8e-06 56.2 225 25.8
Actinidia05262 Actinidia chinensis HOM05D000218 ORTHO05D000125 5.0e-06 55.8 225 25.8
AL2G21240 Arabidopsis lyrata HOM05D000218 ORTHO05D000125 5.0e-06 55.8 225 26.2
MSTRG.5731 Avicennia marina HOM05D000218 ORTHO05D000125 5.0e-06 55.8 225 25.8
A01p36110 Brassica napus HOM05D000218 ORTHO05D000125 5.0e-06 55.8 225 26.2
CSS0017718 Camellia sinensis var. sinensis HOM05D000218 ORTHO05D000125 5.0e-06 55.8 225 26.2
Cpa.g.c27582.1 Carica papaya HOM05D000218 ORTHO05D000125 5.0e-06 55.8 225 26.2
Gohir.A04G021360 Gossypium hirsutum HOM05D000218 ORTHO05D000125 5.0e-06 55.8 225 26.2
Gohir.D01G062400 Gossypium hirsutum HOM05D000218 ORTHO05D000125 5.0e-06 55.8 225 25.8
Gohir.D05G365300 Gossypium hirsutum HOM05D000218 ORTHO05D000125 5.0e-06 55.8 225 26.2
Mapoly0034s0121 Marchantia polymorpha HOM05D000218 ORTHO05D000125 5.0e-06 55.8 225 25.8
Mapoly0080s0025 Marchantia polymorpha HOM05D000218 ORTHO05D000125 5.0e-06 55.8 225 25.8
Mapoly0080s0026 Marchantia polymorpha HOM05D000218 ORTHO05D000125 5.0e-06 55.8 225 26.2
Oeu035462.1 Olea europaea HOM05D000218 ORTHO05D000125 5.0e-06 55.8 225 25.8
PSO541G6244 Papaver somniferum HOM05D000218 ORTHO05D000125 5.0e-06 55.8 225 25.8
PSO573G0013 Papaver somniferum HOM05D000218 ORTHO05D000125 5.0e-06 55.8 225 25.8
Psat7g161800 Pisum sativum HOM05D000218 ORTHO05D000125 5.0e-06 55.8 132 29.5
SEGI_09573 Sequoiadendron giganteum HOM05D000218 ORTHO05D000125 5.0e-06 55.8 225 25.8
PGSC0003DMG400014430 Solanum tuberosum HOM05D000218 ORTHO05D000125 5.0e-06 55.8 225 25.8
TWI39G1200 Tripterygium wilfordii HOM05D000218 ORTHO05D000125 5.0e-06 55.8 225 25.8
TWI63G0860 Tripterygium wilfordii HOM05D000218 ORTHO05D000125 5.0e-06 55.8 225 25.8
CARHR252230 Cardamine hirsuta HOM05D000218 ORTHO05D000125 6.6e-06 55.5 225 25.8
PSO832G0914 Papaver somniferum HOM05D000218 ORTHO05D000125 6.6e-06 55.5 225 25.3
TPR.G11837 Trifolium pratense HOM05D000218 ORTHO05D000125 6.6e-06 55.5 225 25.8
AagrBONN_evm.TU.Sc2ySwM_344.4429 Anthoceros agrestis HOM05D000218 ORTHO05D000125 8.6e-06 55.1 225 26.2
AL7G44880 Arabidopsis lyrata HOM05D000218 ORTHO05D000125 8.6e-06 55.1 201 27.9
Cpa.g.sc97.61 Carica papaya HOM05D000218 ORTHO05D000125 8.6e-06 55.1 225 25.3
Ciclev10012290m.g Citrus clementina HOM05D000218 ORTHO05D000125 8.6e-06 55.1 225 25.8
Os04g0628100 Oryza sativa ssp. japonica HOM05D000218 ORTHO05D000125 8.6e-06 55.1 225 25.8
Potri.006G129600 Populus trichocarpa HOM05D000218 ORTHO05D000125 8.6e-06 55.1 225 25.3


User provided reference genes

Program Settings