Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g06230 Nelumbo nucifera HOM05D001194 ORTHO05D021482 1.1e-21 105.5 46 100.0
Nn2g15445 Nelumbo nucifera HOM05D001194 ORTHO05D021482 1.1e-21 105.5 46 100.0
Nn6g35406 Nelumbo nucifera HOM05D001194 ORTHO05D005909 8.1e-09 62.8 26 100.0
Nn8g38927 Nelumbo nucifera HOM05D001194 ORTHO05D005909 2.4e-08 61.2 26 96.2
GSVIVG01016891001 Vitis vinifera HOM05D001194 ORTHO05D005909 2.4e-08 61.2 26 96.2
arahy.Tifrunner.gnm1.ann1.HDE469 Arachis hypogaea HOM05D001194 ORTHO05D021482 3.1e-08 60.8 31 80.6
TAR626G1853 Trochodendron aralioides HOM05D001194 ORTHO05D005909 4.0e-08 60.5 26 92.3
arahy.Tifrunner.gnm1.ann1.4DL9G8 Arachis hypogaea HOM05D004293 ORTHO05D005044 6.8e-08 59.7 26 92.3
Manes.04G137500 Manihot esculenta HOM05D001194 ORTHO05D005909 6.8e-08 59.7 26 92.3
Atru.chr1.3631 Acer truncatum HOM05D001194 ORTHO05D005909 2.0e-07 58.2 26 88.5
Atru.chr1.3635 Acer truncatum HOM05D001194 ORTHO05D005909 2.0e-07 58.2 26 88.5
Aqoxy7G01307 Aquilegia oxysepala HOM05D001194 ORTHO05D005909 2.0e-07 58.2 26 92.3
CiPaw.01G227200 Carya illinoinensis HOM05D001194 ORTHO05D005909 2.0e-07 58.2 26 88.5
QL05p015826 Quercus lobata HOM05D001194 ORTHO05D005909 2.0e-07 58.2 26 88.5
arahy.Tifrunner.gnm1.ann1.2JHZ20 Arachis hypogaea HOM05D001194 ORTHO05D005909 2.6e-07 57.8 26 88.5
arahy.Tifrunner.gnm1.ann1.3FEZ81 Arachis hypogaea HOM05D001194 ORTHO05D005909 2.6e-07 57.8 26 88.5
arahy.Tifrunner.gnm1.ann1.86BA7N Arachis hypogaea HOM05D001194 ORTHO05D005909 2.6e-07 57.8 26 88.5
arahy.Tifrunner.gnm1.ann1.FTMH30 Arachis hypogaea HOM05D001891 ORTHO05D005832 2.6e-07 57.8 26 88.5
arahy.Tifrunner.gnm1.ann1.U81MKX Arachis hypogaea HOM05D001194 ORTHO05D005909 2.6e-07 57.8 26 88.5
Ca_23295_v3 Cicer arietinum L. HOM05D001194 ORTHO05D005909 2.6e-07 57.8 26 88.5
Duzib160G0082 Durio zibethinus HOM05D001194 ORTHO05D005909 2.6e-07 57.8 26 84.6
Duzib235G0439 Durio zibethinus HOM05D001194 ORTHO05D005909 2.6e-07 57.8 26 84.6
Glyma.07G012500 Glycine max HOM05D001194 ORTHO05D005909 2.6e-07 57.8 26 88.5
Glyma.08G196200 Glycine max HOM05D001194 ORTHO05D005909 2.6e-07 57.8 26 88.5
Glyma.09G152800 Glycine max HOM05D001194 ORTHO05D005909 2.6e-07 57.8 26 88.5
Gohir.A10G062100 Gossypium hirsutum HOM05D001194 ORTHO05D005909 2.6e-07 57.8 26 84.6
Gohir.D10G063800 Gossypium hirsutum HOM05D001194 ORTHO05D005909 2.6e-07 57.8 26 84.6
Gorai.011G067700 Gossypium raimondii HOM05D001194 ORTHO05D005909 2.6e-07 57.8 26 84.6
Lj3g0001136 Lotus japonicus HOM05D001194 ORTHO05D005909 2.6e-07 57.8 26 88.5
Lalb_Chr04g0263101 Lupinus albus HOM05D001194 ORTHO05D005909 2.6e-07 57.8 26 88.5
Phvul.010G141900 Phaseolus vulgaris HOM05D001194 ORTHO05D005909 2.6e-07 57.8 26 88.5
Phvul.010G142000 Phaseolus vulgaris HOM05D001194 ORTHO05D005909 2.6e-07 57.8 26 88.5
Thecc.06G107800 Theobroma cacao HOM05D001194 ORTHO05D005909 2.6e-07 57.8 26 84.6
VMungo0331G0168 Vigna mungo HOM05D001194 ORTHO05D005909 2.6e-07 57.8 26 88.5
VMungo0331G0238 Vigna mungo HOM05D001194 ORTHO05D005909 2.6e-07 57.8 26 88.5
ClCG07G013590 Citrullus lanatus HOM05D001194 ORTHO05D005909 3.4e-07 57.4 26 88.5
MELO3C013031.2 Cucumis melo HOM05D001194 ORTHO05D005909 3.4e-07 57.4 26 88.5
CsaV3_3G044050 Cucumis sativus L. HOM05D001194 ORTHO05D005909 3.4e-07 57.4 26 88.5
MBI04_g06219_MAGBIO Magnolia biondii HOM05D001194 ORTHO05D005909 4.4e-07 57.0 26 92.3
Lj3g0000235 Lotus japonicus HOM05D001194 ORTHO05D005909 5.8e-07 56.6 26 84.6
PGR102G0345 Punica granatum HOM05D001194 ORTHO05D005909 5.8e-07 56.6 26 88.5
arahy.Tifrunner.gnm1.ann1.D8HU13 Arachis hypogaea HOM05D001194 ORTHO05D005909 7.6e-07 56.2 32 75.0
COL.COLO4_30608 Corchorus olitorius HOM05D001194 ORTHO05D005909 9.9e-07 55.8 26 80.8
Potri.001G193600 Populus trichocarpa HOM05D001194 ORTHO05D005909 9.9e-07 55.8 26 84.6
Potri.001G199600 Populus trichocarpa HOM05D001194 ORTHO05D005909 9.9e-07 55.8 26 84.6
Sabra01G0156300 Salix brachista HOM05D001194 ORTHO05D005909 9.9e-07 55.8 26 84.6
Sed0016739 Sechium edule HOM05D001194 ORTHO05D005909 9.9e-07 55.8 26 84.6
arahy.Tifrunner.gnm1.ann1.H04EJ4 Arachis hypogaea HOM05D001194 ORTHO05D005044 1.3e-06 55.5 26 84.6
arahy.Tifrunner.gnm1.ann1.K82YC3 Arachis hypogaea HOM05D004293 ORTHO05D005044 1.3e-06 55.5 26 84.6
Eucgr.J02887 Eucalyptus grandis HOM05D001194 ORTHO05D005909 1.3e-06 55.5 26 84.6
arahy.Tifrunner.gnm1.ann1.Z38AJU Arachis hypogaea HOM05D000237 ORTHO05D082289 1.7e-06 55.1 32 71.9
Medtr8g015600 Medicago truncatula HOM05D001194 ORTHO05D005909 1.7e-06 55.1 26 84.6
Psat4g194400 Pisum sativum HOM05D001194 ORTHO05D005909 1.7e-06 55.1 26 84.6
arahy.Tifrunner.gnm1.ann1.YRZZ7C Arachis hypogaea HOM05D001194 ORTHO05D005909 2.2e-06 54.7 26 84.6
CANSAT56G1148 Cannabis sativa HOM05D001194 ORTHO05D005909 2.2e-06 54.7 26 84.6
Ah.01g004470 Amaranthus hybridus HOM05D001194 ORTHO05D005909 2.9e-06 54.3 26 88.5
arahy.Tifrunner.gnm1.ann1.CV7JLA Arachis hypogaea HOM05D004293 ORTHO05D005044 2.9e-06 54.3 26 84.6
Dinv30399 Davidia involucrata HOM05D001194 ORTHO05D005909 2.9e-06 54.3 26 84.6
Sed0012613 Sechium edule HOM05D001194 ORTHO05D005909 2.9e-06 54.3 26 84.6
EL10Ac9g21120 Beta vulgaris HOM05D001194 ORTHO05D005909 3.8e-06 53.9 26 88.5
EL10Ac9g21131 Beta vulgaris HOM05D001194 ORTHO05D005909 3.8e-06 53.9 26 88.5
AUR62038337 Chenopodium quinoa HOM05D001194 ORTHO05D005909 3.8e-06 53.9 26 88.5
Hund00742 Selenicereus undatus HOM05D001194 ORTHO05D005909 8.4e-06 52.8 26 80.8


User provided reference genes

Program Settings