Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g15438 Nelumbo nucifera HOM05D008019 ORTHO05D010184 2.1e-87 325.5 146 100.0
TAR623G0854 Trochodendron aralioides HOM05D008019 ORTHO05D010184 1.9e-67 259.2 146 80.8
TAR623G1004 Trochodendron aralioides HOM05D008019 ORTHO05D010184 1.3e-65 253.1 146 78.8
Manes.07G005100 Manihot esculenta HOM05D008019 ORTHO05D010184 1.6e-63 246.1 146 75.3
CSS0044570 Camellia sinensis var. sinensis HOM05D008019 ORTHO05D010184 3.4e-61 238.4 147 74.1
Cfa010760 Carpinus fangiana HOM05D008019 ORTHO05D010184 1.7e-60 236.1 148 75.0
RcHm_v2.0_Chr1g0315801 Rosa chinensis HOM05D008019 ORTHO05D010184 3.8e-60 235.0 146 71.9
Dinv43452 Davidia involucrata HOM05D008019 ORTHO05D010184 8.4e-60 233.8 140 79.3
Haze_03214 Corylus avellana HOM05D008019 ORTHO05D010184 1.1e-59 233.4 145 75.9
QL04p007219 Quercus lobata HOM05D008019 ORTHO05D010184 4.2e-59 231.5 147 74.1
Potri.009G062400 Populus trichocarpa HOM05D008019 ORTHO05D010184 5.4e-59 231.1 146 74.0
Aqoxy7G00800 Aquilegia oxysepala HOM05D008019 ORTHO05D010184 1.2e-58 229.9 141 73.8
Potri.001G268000 Populus trichocarpa HOM05D008019 ORTHO05D010184 4.6e-58 228.0 146 72.6
Prupe.2G012100 Prunus persica HOM05D008019 ORTHO05D010184 1.0e-57 226.9 146 72.6
GSVIVG01032075001 Vitis vinifera HOM05D008019 ORTHO05D010184 1.8e-57 226.1 114 85.1
Cc02_g27810 Coffea canephora HOM05D008019 ORTHO05D010184 6.7e-57 224.2 150 68.0
Rhsim07G0054900 Rhododendron simsii HOM05D008019 ORTHO05D010184 8.7e-57 223.8 145 73.8
TWI09G1168 Tripterygium wilfordii HOM05D008019 ORTHO05D010184 1.1e-56 223.4 132 75.8
Ciclev10033035m.g Citrus clementina HOM05D008019 ORTHO05D010184 1.5e-56 223.0 146 72.6
MBI04_g13624_MAGBIO Magnolia biondii HOM05D008019 ORTHO05D010184 1.9e-56 222.6 144 70.8
Thecc.01G411900 Theobroma cacao HOM05D008019 ORTHO05D010184 4.3e-56 221.5 148 68.2
FAN06G1027 Fragaria x ananassa HOM05D008019 ORTHO05D010184 1.3e-55 219.9 147 69.4
PGR044G0644 Punica granatum HOM05D008019 ORTHO05D010184 1.3e-55 219.9 148 66.9
FvH4_7g00910 Fragaria vesca HOM05D008019 ORTHO05D010184 1.6e-55 219.5 147 69.4
COL.COLO4_23925 Corchorus olitorius HOM05D008019 ORTHO05D010184 2.8e-55 218.8 146 68.5
Oeu010780.1 Olea europaea HOM05D008019 ORTHO05D010184 2.8e-55 218.8 105 86.7
FAN01G0739 Fragaria x ananassa HOM05D008019 ORTHO05D010184 4.8e-55 218.0 147 68.7
Glyma.12G238000 Glycine max HOM05D008019 ORTHO05D010184 4.8e-55 218.0 131 71.8
MD02G1313500 Malus domestica HOM05D008019 ORTHO05D010184 4.8e-55 218.0 147 70.1
Actinidia31058 Actinidia chinensis HOM05D008019 ORTHO05D010184 1.4e-54 216.5 114 80.7
MELO3C023543.2 Cucumis melo HOM05D008019 ORTHO05D010184 1.8e-54 216.1 147 67.3
CsaV3_7G031160 Cucumis sativus L. HOM05D008019 ORTHO05D010184 5.3e-54 214.5 147 66.7
ECA248G1827 Erigeron canadensis HOM05D008019 ORTHO05D010184 5.3e-54 214.5 112 81.2
VMungo1127G0775 Vigna mungo HOM05D008019 ORTHO05D010184 5.3e-54 214.5 145 66.2
Lj9A631G50 Lonicera japonica HOM05D008019 ORTHO05D010184 9.0e-54 213.8 151 66.9
MSTRG.17046 Avicennia marina HOM05D008019 ORTHO05D010184 1.5e-53 213.0 105 83.8
Gohir.A12G094001 Gossypium hirsutum HOM05D008019 ORTHO05D010184 2.0e-53 212.6 151 64.9
Phvul.011G212700 Phaseolus vulgaris HOM05D008019 ORTHO05D010184 2.0e-53 212.6 136 70.6
Eucgr.J01265 Eucalyptus grandis HOM05D008019 ORTHO05D010184 2.6e-53 212.2 140 68.6
HanXRQChr01g0016161 Helianthus annuus HOM05D008019 ORTHO05D010184 3.4e-53 211.8 145 67.6
arahy.Tifrunner.gnm1.ann1.SF3C2I Arachis hypogaea HOM05D008019 ORTHO05D010184 4.5e-53 211.5 110 80.0
arahy.Tifrunner.gnm1.ann1.V37GBM Arachis hypogaea HOM05D008019 ORTHO05D010184 4.5e-53 211.5 110 80.0
Lj3g0025736 Lotus japonicus HOM05D008019 ORTHO05D010184 4.5e-53 211.5 149 63.1
ClCG09G004230 Citrullus lanatus HOM05D008019 ORTHO05D010184 1.7e-52 209.5 150 66.0
FAN10G3815 Fragaria x ananassa HOM05D008019 ORTHO05D010184 2.2e-52 209.1 145 67.6
SGA_v2.0_scaffold167G38441 Striga asiatica HOM05D008019 ORTHO05D010184 2.9e-52 208.8 115 77.4
CAN.G1155.15 Capsicum annuum HOM05D008019 ORTHO05D010184 4.9e-52 208.0 139 66.9
Duzib138G0215 Durio zibethinus HOM05D008019 ORTHO05D010184 4.9e-52 208.0 150 64.7
SalBow5G2002 Salvia bowleyana HOM05D008019 ORTHO05D010184 4.9e-52 208.0 137 70.1
CDE05G1162 Ceratophyllum demersum HOM05D008019 ORTHO05D010184 6.4e-52 207.6 124 72.6
CANSAT80G0909 Cannabis sativa HOM05D008019 ORTHO05D010184 8.4e-52 207.2 126 73.0
vmacro13657 Vaccinium macrocarpon HOM05D008019 ORTHO05D010184 1.4e-51 206.5 196 55.6
TPR.G1886 Trifolium pratense HOM05D008019 ORTHO05D010184 2.1e-50 202.6 122 69.7
THA.LOC104819690 Tarenaya hassleriana HOM05D008019 ORTHO05D010184 2.7e-50 202.2 124 71.8
Gorai.008G105200 Gossypium raimondii HOM05D008019 ORTHO05D010184 3.5e-50 201.8 158 60.1
Os09g0485800 Oryza sativa ssp. japonica HOM05D008019 ORTHO05D010184 5.1e-49 198.0 104 78.8
Lsat_1_v5_gn_1_107820 Lactuca sativa HOM05D008019 ORTHO05D010184 8.7e-49 197.2 119 73.9
Sabra09G0046100 Salix brachista HOM05D000752 ORTHO05D000572 1.1e-48 196.8 91 90.1
unitig_750.g28450 Utricularia gibba HOM05D008019 ORTHO05D010184 1.5e-48 196.4 105 76.2
SEGI_23902 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 3.4e-45 185.3 102 73.5
Sed0006336 Sechium edule HOM05D008019 ORTHO05D010184 1.8e-41 172.9 141 58.9
Pp3c14_7420 Physcomitrium patens HOM05D008019 ORTHO05D010184 3.0e-41 172.2 118 63.6
FAN03G3138 Fragaria x ananassa HOM05D008019 ORTHO05D010184 1.1e-40 170.2 100 71.0
Migut.B01317 Erythranthe guttata HOM05D008019 ORTHO05D010184 1.5e-40 169.9 88 81.8
Hund19732 Selenicereus undatus HOM05D008019 ORTHO05D010184 1.3e-39 166.8 76 93.4
Lalb_Chr19g0132131 Lupinus albus HOM05D008019 ORTHO05D010184 5.3e-38 161.4 77 87.0
ATR0605G214 Amborella trichopoda HOM05D008019 ORTHO05D010184 3.4e-37 158.7 95 71.6
Sc10g0000030 Simmondsia chinensis HOM05D008019 ORTHO05D010184 9.4e-35 150.6 74 87.8
Zm00001eb101800 Zea mays HOM05D008019 ORTHO05D010184 1.4e-30 136.7 73 72.6
Zm00001eb101810 Zea mays HOM05D008019 ORTHO05D010184 1.8e-30 136.3 73 72.6
Gohir.D12G096933 Gossypium hirsutum HOM05D008019 ORTHO05D010184 4.1e-22 108.6 103 52.4
SEGI_33125 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 1.8e-17 93.2 51 72.5
Medtr8g036830 Medicago truncatula HOM05D008019 ORTHO05D010184 3.7e-07 58.9 67 43.3
SEGI_37443 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 4.8e-07 58.5 38 60.5
Lalb_Chr19g0132141 Lupinus albus HOM05D008019 ORTHO05D010184 5.3e-06 55.1 29 72.4


User provided reference genes

Program Settings