Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn113s43373 Nelumbo nucifera HOM05D006848 ORTHO05D008445 1.8e-110 402.9 250 100.0
Nn2g15435 Nelumbo nucifera HOM05D006848 ORTHO05D008445 1.8e-110 402.9 250 100.0
TAR623G0094 Trochodendron aralioides HOM05D006848 ORTHO05D008445 5.4e-83 311.6 246 74.0
MBI01_g27616_MAGBIO Magnolia biondii HOM05D006848 ORTHO05D008445 9.3e-83 310.8 250 78.4
Aqoxy3G03705 Aquilegia oxysepala HOM05D006848 ORTHO05D008445 5.1e-81 305.1 179 81.6
Oeu036185.1 Olea europaea HOM05D006848 ORTHO05D008445 6.6e-81 304.7 259 67.2
TAR623G0130 Trochodendron aralioides HOM05D006848 ORTHO05D008445 1.5e-80 303.5 176 83.5
FvH4_7g00900 Fragaria vesca HOM05D006848 ORTHO05D008445 7.3e-80 301.2 261 65.9
Hma1.2p1_0312F.1_g121500 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 1.3e-79 300.4 259 67.6
Atru.chr11.2648 Acer truncatum HOM05D006848 ORTHO05D008445 1.6e-79 300.1 177 79.7
Ciclev10032624m.g Citrus clementina HOM05D006848 ORTHO05D008445 4.8e-79 298.5 247 63.2
Eucgr.G03390 Eucalyptus grandis HOM05D006848 ORTHO05D008445 1.8e-78 296.6 174 80.5
Haze_03213 Corylus avellana HOM05D006848 ORTHO05D008445 2.4e-78 296.2 262 69.8
FAN10G1997 Fragaria x ananassa HOM05D006848 ORTHO05D008445 3.1e-78 295.8 267 65.2
Lalb_Chr01g0015361 Lupinus albus HOM05D006848 ORTHO05D008445 3.1e-78 295.8 260 61.9
Migut.B01319 Erythranthe guttata HOM05D006848 ORTHO05D008445 4.0e-78 295.4 258 63.6
MD07G1008600 Malus domestica HOM05D006848 ORTHO05D008445 6.9e-78 294.7 265 63.8
PGR031G3843 Punica granatum HOM05D006848 ORTHO05D008445 6.9e-78 294.7 250 66.0
Sabra09G0046200 Salix brachista HOM05D006848 ORTHO05D008445 9.0e-78 294.3 255 62.7
VMungo1080G1360 Vigna mungo HOM05D006848 ORTHO05D008445 1.2e-77 293.9 179 78.8
Rhsim07G0054800 Rhododendron simsii HOM05D006848 ORTHO05D008445 2.0e-77 293.1 255 68.6
SalBow5G3403 Salvia bowleyana HOM05D006848 ORTHO05D008445 2.0e-77 293.1 247 64.8
Glyma.08G154300 Glycine max HOM05D006848 ORTHO05D008445 3.4e-77 292.4 179 78.2
Nitab4.5_0002477g0050 Nicotiana tabacum HOM05D006848 ORTHO05D008445 3.4e-77 292.4 176 77.3
Gohir.A08G053600 Gossypium hirsutum HOM05D006848 ORTHO05D008445 7.6e-77 291.2 175 78.9
CAN.G170.111 Capsicum annuum HOM05D006848 ORTHO05D008445 9.9e-77 290.8 176 77.8
MD02G1313800 Malus domestica HOM05D006848 ORTHO05D008445 9.9e-77 290.8 261 63.2
CANSAT80G2127 Cannabis sativa HOM05D006848 ORTHO05D008445 1.3e-76 290.4 253 61.3
CiPaw.13G004400 Carya illinoinensis HOM05D006848 ORTHO05D008445 1.7e-76 290.0 161 85.1
Gohir.D08G063100 Gossypium hirsutum HOM05D006848 ORTHO05D008445 1.7e-76 290.0 175 78.3
Gorai.004G065300 Gossypium raimondii HOM05D006848 ORTHO05D008445 1.7e-76 290.0 175 78.3
Nitab4.5_0000634g0080 Nicotiana tabacum HOM05D006848 ORTHO05D008445 2.9e-76 289.3 175 77.7
QL04p007215 Quercus lobata HOM05D006848 ORTHO05D008445 3.8e-76 288.9 260 67.3
Duzib138G1675 Durio zibethinus HOM05D006848 ORTHO05D008445 4.9e-76 288.5 179 76.0
Glyma.15G273300 Glycine max HOM05D006848 ORTHO05D008445 4.9e-76 288.5 248 62.5
Peaxi162Scf00347g00071 Petunia axillaris HOM05D006848 ORTHO05D008445 4.9e-76 288.5 174 78.2
TWI09G1547 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 4.9e-76 288.5 177 76.3
Thecc.01G412000 Theobroma cacao HOM05D006848 ORTHO05D008445 1.1e-75 287.3 250 61.6
Peaxi162Scf00428g00063 Petunia axillaris HOM05D006848 ORTHO05D008445 1.4e-75 287.0 174 77.6
Sc10g0000020 Simmondsia chinensis HOM05D006848 ORTHO05D008445 1.4e-75 287.0 249 71.5
COL.COLO4_23924 Corchorus olitorius HOM05D006848 ORTHO05D008445 3.2e-75 285.8 247 60.3
Ca_14368_v3 Cicer arietinum L. HOM05D006848 ORTHO05D008445 4.2e-75 285.4 176 77.8
HanXRQChr01g0016151 Helianthus annuus HOM05D006848 ORTHO05D008445 4.2e-75 285.4 174 78.7
Sopen01g034120 Solanum pennellii HOM05D006848 ORTHO05D008445 5.4e-75 285.0 176 76.7
CsaV3_7G031150 Cucumis sativus L. HOM05D006848 ORTHO05D008445 9.3e-75 284.3 179 75.4
Eucgr.H02489 Eucalyptus grandis HOM05D006848 ORTHO05D008445 9.3e-75 284.3 172 78.5
TWI53G1868 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 9.3e-75 284.3 250 58.8
MELO3C023542.2 Cucumis melo HOM05D006848 ORTHO05D008445 1.2e-74 283.9 179 74.9
DCAR_029663 Daucus carota HOM05D006848 ORTHO05D008445 1.2e-74 283.9 174 75.9
Potri.009G062500 Populus trichocarpa HOM05D006848 ORTHO05D008445 1.2e-74 283.9 255 60.0
Solyc01g087040.2 Solanum lycopersicum HOM05D006848 ORTHO05D008445 1.2e-74 283.9 176 76.1
Cc02_g27800 Coffea canephora HOM05D006848 ORTHO05D008445 1.6e-74 283.5 176 76.7
Lj7A569T67 Lonicera japonica HOM05D006848 ORTHO05D008445 1.6e-74 283.5 157 84.7
PGSC0003DMG400006872 Solanum tuberosum HOM05D006848 ORTHO05D008445 1.6e-74 283.5 261 59.0
unitig_750.g28451 Utricularia gibba HOM05D006848 ORTHO05D008445 2.7e-74 282.7 158 84.8
ClCG09G004240 Citrullus lanatus HOM05D006848 ORTHO05D008445 6.0e-74 281.6 254 58.7
vmacro13656 Vaccinium macrocarpon HOM05D006848 ORTHO05D008445 6.0e-74 281.6 243 65.4
Cpa.g.sc386.5 Carica papaya HOM05D006848 ORTHO05D008445 7.9e-74 281.2 249 61.0
Prupe.2G012000 Prunus persica HOM05D006848 ORTHO05D008445 7.9e-74 281.2 154 85.7
THA.LOC104819691 Tarenaya hassleriana HOM05D006848 ORTHO05D008445 7.9e-74 281.2 157 82.2
Carub.0005s3015 Capsella rubella HOM05D006848 ORTHO05D008445 1.0e-73 280.8 159 82.4
AL5G46400 Arabidopsis lyrata HOM05D006848 ORTHO05D008445 1.3e-73 280.4 159 82.4
Sed0006624 Sechium edule HOM05D006848 ORTHO05D008445 1.3e-73 280.4 258 57.8
Lsat_1_v5_gn_1_107841 Lactuca sativa HOM05D006848 ORTHO05D008445 3.0e-73 279.3 174 77.6
Psat5g204320 Pisum sativum HOM05D006848 ORTHO05D008445 3.9e-73 278.9 158 82.3
PSO384G0049 Papaver somniferum HOM05D006848 ORTHO05D008445 8.7e-73 277.7 175 75.4
arahy.Tifrunner.gnm1.ann1.27LE56 Arachis hypogaea HOM05D006848 ORTHO05D008445 1.1e-72 277.3 179 77.7
arahy.Tifrunner.gnm1.ann1.9ZN1DC Arachis hypogaea HOM05D006848 ORTHO05D008445 1.1e-72 277.3 179 77.7
TPR.G12217 Trifolium pratense HOM05D006848 ORTHO05D008445 1.1e-72 277.3 175 74.3
CARHR291430 Cardamine hirsuta HOM05D006848 ORTHO05D008445 1.9e-72 276.6 157 82.2
Phvul.005G020200 Phaseolus vulgaris HOM05D006848 ORTHO05D008445 1.9e-72 276.6 179 75.4
Medtr3g028150 Medicago truncatula HOM05D006848 ORTHO05D008445 2.5e-72 276.2 175 74.3
BcaC01g04883 Brassica carinata HOM05D006848 ORTHO05D008445 3.3e-72 275.8 160 81.2
A03p27190 Brassica napus HOM05D006848 ORTHO05D008445 3.3e-72 275.8 160 81.2
BolC3t15604H Brassica oleracea HOM05D006848 ORTHO05D008445 3.3e-72 275.8 160 81.2
BraA03t11932Z Brassica rapa HOM05D006848 ORTHO05D008445 3.3e-72 275.8 160 81.2
SGA_v2.0_scaffold167G38443 Striga asiatica HOM05D006848 ORTHO05D008445 4.3e-72 275.4 254 66.5
PSO135G0340 Papaver somniferum HOM05D006848 ORTHO05D008445 7.4e-72 274.6 175 74.9
BcaB01g02988 Brassica carinata HOM05D006848 ORTHO05D008445 1.6e-71 273.5 157 82.2
EL10Ac2g03652 Beta vulgaris HOM05D006848 ORTHO05D008445 8.1e-71 271.2 249 58.6
ECA248G3622 Erigeron canadensis HOM05D006848 ORTHO05D008445 8.1e-71 271.2 250 61.2
FAN01G1688 Fragaria x ananassa HOM05D006848 ORTHO05D008445 3.4e-69 265.8 261 60.5
Aa31LG10G17430 Aethionema arabicum HOM05D006848 ORTHO05D008445 4.5e-69 265.4 152 81.6
CDE05G1882 Ceratophyllum demersum HOM05D006848 ORTHO05D008445 9.9e-69 264.2 159 76.7
AUR62009377 Chenopodium quinoa HOM05D006848 ORTHO05D008445 1.1e-67 260.8 249 66.3
SEGI_25651 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 1.1e-67 260.8 158 78.5
ATR0605G006 Amborella trichopoda HOM05D006848 ORTHO05D008445 9.3e-67 257.7 177 70.6
Sp1g00010 Schrenkiella parvula HOM05D006848 ORTHO05D008445 6.0e-66 255.0 154 78.6
Sp5g00040 Schrenkiella parvula HOM05D006848 ORTHO05D008445 6.0e-66 255.0 154 78.6
AUR62023058 Chenopodium quinoa HOM05D006848 ORTHO05D008445 2.3e-65 253.1 248 61.7
FAN06G1876 Fragaria x ananassa HOM05D006848 ORTHO05D008445 3.0e-65 252.7 252 61.1
RcHm_v2.0_Chr3g0473601 Rosa chinensis HOM05D006848 ORTHO05D008445 3.0e-65 252.7 238 60.9
AagrBONN_evm.TU.Sc2ySwM_228.3199 Anthoceros agrestis HOM05D006848 ORTHO05D008445 2.5e-64 249.6 172 68.0
Zm00001eb034740 Zea mays HOM05D006848 ORTHO05D008445 2.5e-64 249.6 157 74.5
HPP92_007477 Vanilla planifolia HOM05D006848 ORTHO05D008445 3.3e-64 249.2 173 68.8
C03p32680 Brassica napus HOM05D006848 ORTHO05D008445 1.5e-61 240.4 139 82.7
Lj1g0010524 Lotus japonicus HOM05D006848 ORTHO05D008445 1.0e-60 237.7 173 69.4
AT3G63540 Arabidopsis thaliana HOM05D006848 ORTHO05D008445 2.2e-60 236.5 140 79.3
Thhalv10006361m.g Eutrema salsugineum HOM05D006848 ORTHO05D008445 4.9e-60 235.3 174 64.9
Os08g0504500 Oryza sativa ssp. japonica HOM05D006848 ORTHO05D008445 8.4e-60 234.6 150 73.3
SMO217G0004 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 1.4e-59 233.8 159 66.7
SMO356G0122 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 1.4e-59 233.8 159 66.7
Actinidia36713 Actinidia chinensis HOM05D006848 ORTHO05D008445 1.9e-56 223.4 132 81.8
Mapoly0075s0034 Marchantia polymorpha HOM05D006848 ORTHO05D008445 1.9e-56 223.4 159 66.0
Pp3c4_11800 Physcomitrium patens HOM05D006848 ORTHO05D008445 7.4e-56 221.5 158 65.8
Manes.10G144600 Manihot esculenta HOM05D006848 ORTHO05D008445 1.6e-55 220.3 218 56.9
Dinv43453 Davidia involucrata HOM05D006848 ORTHO05D008445 3.4e-53 212.6 201 69.2
CBR_g23941 Chara braunii HOM05D006848 ORTHO05D008445 2.3e-49 199.9 171 56.7
CDE05G3657 Ceratophyllum demersum HOM05D000031 ORTHO05D008445 1.4e-46 190.7 126 71.4
Hma1.2p1_0137F.1_g062450 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 1.5e-45 187.2 124 75.8
RcHm_v2.0_Chr1g0315791 Rosa chinensis HOM05D006848 ORTHO05D008445 1.7e-44 183.7 120 72.5
Actinidia24670 Actinidia chinensis HOM05D006848 ORTHO05D008445 5.3e-38 162.2 105 78.1
MCO14G442 Micromonas commoda HOM05D006848 ORTHO05D008445 1.3e-23 114.4 158 41.1
Cre03.g198850 Chlamydomonas reinhardtii HOM05D006848 ORTHO05D008445 1.1e-22 111.3 162 36.4
SEGI_20764 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 4.2e-19 99.4 50 90.0
PRCOL_00004469 Prasinoderma coloniale HOM05D006848 ORTHO05D008445 1.2e-13 81.3 161 34.2
A04p00030 Brassica napus HOM05D006848 ORTHO05D008445 2.3e-09 67.0 55 60.0
Hund17393 Selenicereus undatus HOM05D006773 ORTHO05D008775 3.7e-07 59.7 152 29.6
HanXRQChr05g0160801 Helianthus annuus HOM05D006773 ORTHO05D008775 8.3e-07 58.5 155 29.0
Lsat_1_v5_gn_6_96860 Lactuca sativa HOM05D006773 ORTHO05D008775 8.3e-07 58.5 152 29.6
ECA246G0400 Erigeron canadensis HOM05D006773 ORTHO05D005980 7.0e-06 55.5 151 27.8


User provided reference genes

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