Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g15434 Nelumbo nucifera HOM05D006411 ORTHO05D007563 8.5e-148 526.9 259 100.0
Nn1g07843 Nelumbo nucifera HOM05D006411 ORTHO05D007563 3.6e-45 186.0 196 56.1
Nn3g20757 Nelumbo nucifera HOM05D006411 ORTHO05D007563 2.7e-21 106.7 151 45.7
COL.COLO4_21790 Corchorus olitorius HOM05D006411 ORTHO05D007563 8.0e-21 105.1 168 38.7
PGR119G0335 Punica granatum HOM05D006411 ORTHO05D007563 4.8e-18 95.9 171 38.0
TAR371G0942 Trochodendron aralioides HOM05D006411 ORTHO05D007563 3.1e-17 93.2 181 40.3
MD16G1129800 Malus domestica HOM05D006411 ORTHO05D007563 4.1e-17 92.8 179 36.3
Prupe.1G216800 Prunus persica HOM05D006411 ORTHO05D007563 9.1e-17 91.7 187 35.3
MD13G1129600 Malus domestica HOM05D006411 ORTHO05D007563 1.6e-16 90.9 178 34.8
RcHm_v2.0_Chr4g0429021 Rosa chinensis HOM05D006411 ORTHO05D007563 2.0e-16 90.5 181 34.8
Haze_12492 Corylus avellana HOM05D006411 ORTHO05D007563 2.7e-16 90.1 178 36.0
Oeu044509.2 Olea europaea HOM05D006411 ORTHO05D007563 3.5e-16 89.7 174 36.2
PSO765G0094 Papaver somniferum HOM05D006411 ORTHO05D007563 4.5e-16 89.4 185 36.8
Sc11g0000150 Simmondsia chinensis HOM05D006411 ORTHO05D007563 5.9e-16 89.0 176 37.5
ATR0751G011 Amborella trichopoda HOM05D006411 ORTHO05D006707 7.7e-16 88.6 148 41.9
Duzib132G0393 Durio zibethinus HOM05D006411 ORTHO05D007563 1.3e-15 87.8 181 36.5
QL03p049668 Quercus lobata HOM05D006411 ORTHO05D007563 1.3e-15 87.8 179 34.6
FvH4_4g22791 Fragaria vesca HOM05D006411 ORTHO05D007563 1.7e-15 87.4 178 33.1
TWI18G1006 Tripterygium wilfordii HOM05D006411 ORTHO05D007563 3.8e-15 86.3 178 34.8
Cfa009441 Carpinus fangiana HOM05D006411 ORTHO05D007563 5.0e-15 85.9 179 35.2
PSO349G0017 Papaver somniferum HOM05D006411 ORTHO05D007563 6.6e-15 85.5 187 34.2
FAN17G2521 Fragaria x ananassa HOM05D006411 ORTHO05D007563 1.1e-14 84.7 178 32.6
Dinv09212 Davidia involucrata HOM05D006411 ORTHO05D007563 1.5e-14 84.3 179 35.8
GSVIVG01004943001 Vitis vinifera HOM05D006411 ORTHO05D007563 1.9e-14 84.0 181 35.4
Gohir.A01G141100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 2.5e-14 83.6 183 36.6
Atru.chr12.1401 Acer truncatum HOM05D006411 ORTHO05D007563 3.3e-14 83.2 175 37.7
Migut.K01066 Erythranthe guttata HOM05D006411 ORTHO05D007563 3.3e-14 83.2 178 36.5
SalBow2G2156 Salvia bowleyana HOM05D006411 ORTHO05D007563 3.3e-14 83.2 174 33.9
SalBow7G1895 Salvia bowleyana HOM05D006411 ORTHO05D007563 3.3e-14 83.2 174 33.9
FAN12G0338 Fragaria x ananassa HOM05D002780 ORTHO05D003254 5.5e-14 82.4 178 32.6
Lj3g0004314 Lotus japonicus HOM05D006411 ORTHO05D007563 5.5e-14 82.4 186 34.4
Gohir.D01G132100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 1.2e-13 81.3 183 35.5
Gorai.002G163700 Gossypium raimondii HOM05D006411 ORTHO05D007563 1.2e-13 81.3 183 35.5
MSTRG.461 Avicennia marina HOM05D006411 ORTHO05D007563 1.6e-13 80.9 176 33.5
Phvul.011G018400 Phaseolus vulgaris HOM05D006411 ORTHO05D007563 1.6e-13 80.9 172 34.3
CiPaw.05G102200 Carya illinoinensis HOM05D006411 ORTHO05D007563 3.6e-13 79.7 164 36.0
Medtr4g078190 Medicago truncatula HOM05D006411 ORTHO05D007563 4.7e-13 79.3 161 36.6
SGA_v2.0_scaffold80G25942 Striga asiatica HOM05D006411 ORTHO05D007563 4.7e-13 79.3 177 33.3
CANSAT01G2250 Cannabis sativa HOM05D006411 ORTHO05D007563 6.1e-13 79.0 181 35.9
Lsat_1_v5_gn_2_17720 Lactuca sativa HOM05D006411 ORTHO05D007563 6.1e-13 79.0 176 34.1
Solyc12g016210.2 Solanum lycopersicum HOM05D006411 ORTHO05D007563 6.1e-13 79.0 159 36.5
Sopen12g008000 Solanum pennellii HOM05D006411 ORTHO05D007563 6.1e-13 79.0 159 36.5
Manes.09G187200 Manihot esculenta HOM05D006411 ORTHO05D007563 8.0e-13 78.6 157 35.0
VMungo1127G0609 Vigna mungo HOM05D006411 ORTHO05D007563 8.0e-13 78.6 157 35.7
Actinidia09598 Actinidia chinensis HOM05D006411 ORTHO05D007563 2.3e-12 77.0 185 35.1
arahy.Tifrunner.gnm1.ann1.ZM7ZD1 Arachis hypogaea HOM05D006411 ORTHO05D007563 3.0e-12 76.6 189 30.7
CsaV3_6G007790 Cucumis sativus L. HOM05D006411 ORTHO05D007563 3.0e-12 76.6 179 33.5
Lj5g0007299 Lotus japonicus HOM05D006411 ORTHO05D007563 4.0e-12 76.3 173 35.3
Psat7g169880 Pisum sativum HOM05D006411 ORTHO05D007563 4.0e-12 76.3 182 33.5
Sabra03G0118900 Salix brachista HOM05D006411 ORTHO05D007563 4.0e-12 76.3 183 35.5
Glyma.11G109300 Glycine max HOM05D006411 ORTHO05D007563 5.2e-12 75.9 180 33.9
Nn3g17917 Nelumbo nucifera HOM05D006411 ORTHO05D007563 6.8e-12 75.5 146 40.4
AUR62031618 Chenopodium quinoa HOM05D006411 ORTHO05D007563 1.2e-11 74.7 190 33.2
SHI04127 Sapria himalayana HOM05D006411 ORTHO05D007563 1.2e-11 74.7 186 32.3
Ciclev10005785m.g Citrus clementina HOM05D006411 ORTHO05D007563 1.5e-11 74.3 178 34.3
HanXRQChr17g0559141 Helianthus annuus HOM05D006411 ORTHO05D007563 2.0e-11 73.9 171 33.3
THA.LOC104808624 Tarenaya hassleriana HOM05D006411 ORTHO05D007563 2.6e-11 73.6 157 36.9
EL10Ac6g13598 Beta vulgaris HOM05D006411 ORTHO05D007563 3.4e-11 73.2 182 33.0
TPR.G28023 Trifolium pratense HOM05D006411 ORTHO05D007563 3.4e-11 73.2 187 32.6
Thecc.02G193900 Theobroma cacao HOM05D006411 ORTHO05D007563 1.3e-10 71.2 147 37.4
CSS0035608 Camellia sinensis var. sinensis HOM05D006411 ORTHO05D007563 1.7e-10 70.9 180 32.8
Sed0009782 Sechium edule HOM05D006411 ORTHO05D007563 1.7e-10 70.9 179 33.0
CAN.G529.4 Capsicum annuum HOM05D006411 ORTHO05D007563 2.8e-10 70.1 166 33.7
Nn2g15361 Nelumbo nucifera HOM05D006411 ORTHO05D007563 3.7e-10 69.7 99 44.4
Nitab4.5_0003020g0130 Nicotiana tabacum HOM05D006411 ORTHO05D007563 4.9e-10 69.3 164 33.5
Nitab4.5_0002671g0040 Nicotiana tabacum HOM05D006411 ORTHO05D007563 6.3e-10 68.9 181 32.6
Hund06130 Selenicereus undatus HOM05D006411 ORTHO05D007563 6.3e-10 68.9 187 31.6
Ah.03g135590 Amaranthus hybridus HOM05D006411 ORTHO05D007563 8.3e-10 68.6 180 33.3
Os10g0466100 Oryza sativa ssp. japonica HOM05D006411 ORTHO05D007563 8.3e-10 68.6 178 33.1
C07p14190 Brassica napus HOM05D006411 ORTHO05D007563 1.1e-09 68.2 175 34.3
Zm00001eb222220 Zea mays HOM05D006411 ORTHO05D007563 1.1e-09 68.2 149 32.2
BraA07t28715Z Brassica rapa HOM05D006411 ORTHO05D007563 1.4e-09 67.8 176 34.7
Ca_18949_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 1.4e-09 67.8 190 32.1
Ca_29765_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 1.4e-09 67.8 190 32.1
BolC7t41915H Brassica oleracea HOM05D006411 ORTHO05D007563 1.8e-09 67.4 175 34.3
A07p09200 Brassica napus HOM05D006411 ORTHO05D007563 2.4e-09 67.0 176 34.1
Aqoxy5G03164 Aquilegia oxysepala HOM05D006411 ORTHO05D007563 4.1e-09 66.2 156 32.7
AL3G37910 Arabidopsis lyrata HOM05D006411 ORTHO05D007563 4.1e-09 66.2 174 33.3
Sp3g20930 Schrenkiella parvula HOM05D006411 ORTHO05D007563 5.4e-09 65.9 179 33.0
SEGI_29411 Sequoiadendron giganteum HOM05D006411 ORTHO05D007563 9.2e-09 65.1 182 28.6
Thhalv10021467m.g Eutrema salsugineum HOM05D006411 ORTHO05D007563 1.2e-08 64.7 177 33.9
Nn7g35834 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.2e-08 64.7 32 87.5
AT3G23255 Arabidopsis thaliana HOM05D006411 ORTHO05D007563 2.0e-08 63.9 177 34.5
Aa31LG8G9800 Aethionema arabicum HOM05D006411 ORTHO05D007563 2.7e-08 63.5 181 34.3
Lalb_Chr19g0140051 Lupinus albus HOM05D006411 ORTHO05D007563 2.7e-08 63.5 177 30.5
BcaB06g26470 Brassica carinata HOM05D006411 ORTHO05D007563 3.5e-08 63.2 177 35.0
ECA238G0094 Erigeron canadensis HOM05D006411 ORTHO05D007563 1.7e-07 60.8 142 33.8
Pp3c2_21820 Physcomitrium patens HOM05D006411 ORTHO05D007563 1.7e-07 60.8 157 32.5
Carub.0003s2350 Capsella rubella HOM05D006411 ORTHO05D007563 5.0e-07 59.3 179 33.5
Actinidia34001 Actinidia chinensis HOM05D006411 ORTHO05D007563 8.6e-07 58.5 101 36.6
Cc11_g15120 Coffea canephora HOM05D006411 ORTHO05D007563 1.1e-06 58.2 198 29.3
vmacro10313 Vaccinium macrocarpon HOM05D006411 ORTHO05D007563 2.5e-06 57.0 103 34.0
RhsimUnG0101400 Rhododendron simsii HOM05D006411 ORTHO05D007563 4.3e-06 56.2 147 30.6


User provided reference genes

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