Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g15422 Nelumbo nucifera HOM05D000738 ORTHO05D025196 1.0e-84 316.6 154 100.0
Nn7g36177 Nelumbo nucifera HOM05D000738 ORTHO05D000675 6.2e-21 104.8 116 54.3
TAR623G1363 Trochodendron aralioides HOM05D000738 ORTHO05D000675 7.1e-17 91.3 85 60.0
TAR623G1326 Trochodendron aralioides HOM05D000738 ORTHO05D000675 1.6e-16 90.1 85 60.0
Dinv18092 Davidia involucrata HOM05D000738 ORTHO05D000675 4.6e-16 88.6 107 49.5
TAR369G0947 Trochodendron aralioides HOM05D000738 ORTHO05D000675 1.6e-13 80.1 86 57.0
QL07p021913 Quercus lobata HOM05D000738 ORTHO05D000675 2.8e-13 79.3 104 45.2
Dinv24118 Davidia involucrata HOM05D000738 ORTHO05D000675 3.6e-13 79.0 85 50.6
Cfa016872 Carpinus fangiana HOM05D000738 ORTHO05D000675 3.1e-12 75.9 74 54.1
Haze_19918 Corylus avellana HOM05D000738 ORTHO05D000675 5.3e-12 75.1 85 50.6
CSS0039295 Camellia sinensis var. sinensis HOM05D000738 ORTHO05D000675 6.9e-12 74.7 112 41.1
Haze_23089 Corylus avellana HOM05D000738 ORTHO05D025196 6.9e-12 74.7 110 43.6
CiPaw.10G030500 Carya illinoinensis HOM05D000738 ORTHO05D000675 2.6e-11 72.8 108 42.6
CiPaw.09G034300 Carya illinoinensis HOM05D000738 ORTHO05D000675 5.8e-11 71.6 113 41.6
RcHm_v2.0_Chr3g0480931 Rosa chinensis HOM05D000738 ORTHO05D000675 7.6e-11 71.2 83 48.2
MBI01_g27618_MAGBIO Magnolia biondii HOM05D000738 ORTHO05D000675 1.3e-10 70.5 93 46.2
Thecc.09G228100 Theobroma cacao HOM05D000738 ORTHO05D000675 1.3e-10 70.5 85 45.9
Manes.06G166700 Manihot esculenta HOM05D000738 ORTHO05D000675 6.4e-10 68.2 79 49.4
QL01p005282 Quercus lobata HOM05D000738 ORTHO05D000675 8.4e-10 67.8 86 47.7
FvH4_6g23080 Fragaria vesca HOM05D000738 ORTHO05D000675 1.1e-09 67.4 110 40.0
FAN14G5456 Fragaria x ananassa HOM05D000738 ORTHO05D000675 1.1e-09 67.4 110 40.0
Haze_23093 Corylus avellana HOM05D000738 ORTHO05D025196 1.4e-09 67.0 108 39.8
COL.COLO4_28710 Corchorus olitorius HOM05D000738 ORTHO05D000675 1.9e-09 66.6 102 43.1
Duzib093G0290 Durio zibethinus HOM05D000738 ORTHO05D000675 1.9e-09 66.6 103 39.8
FAN09G1318 Fragaria x ananassa HOM05D000738 ORTHO05D000675 1.9e-09 66.6 110 40.0
FAN05G4282 Fragaria x ananassa HOM05D000738 ORTHO05D000675 3.2e-09 65.9 110 39.1
Atru.chr3.2596 Acer truncatum HOM05D000738 ORTHO05D000675 4.2e-09 65.5 75 53.3
COL.COLO4_24847 Corchorus olitorius HOM05D000738 ORTHO05D000675 4.2e-09 65.5 120 37.5
Ciclev10015011m.g Citrus clementina HOM05D000738 ORTHO05D000675 5.5e-09 65.1 80 48.8
CSS0024240 Camellia sinensis var. sinensis HOM05D000738 ORTHO05D000675 7.1e-09 64.7 87 44.8
Cpa.g.sc85.129 Carica papaya HOM05D000738 ORTHO05D000675 2.1e-08 63.2 76 48.7
CiPaw.13G163400 Carya illinoinensis HOM05D000738 ORTHO05D000675 2.1e-08 63.2 80 45.0
Ciclev10004527m.g Citrus clementina HOM05D000738 ORTHO05D000675 2.1e-08 63.2 81 46.9
Gohir.D01G186000 Gossypium hirsutum HOM05D000738 ORTHO05D000675 3.5e-08 62.4 81 43.2
Gorai.002G229400 Gossypium raimondii HOM05D000738 ORTHO05D000675 3.5e-08 62.4 81 43.2
Thecc.05G164400 Theobroma cacao HOM05D000738 ORTHO05D000675 3.5e-08 62.4 81 46.9
DCAR_013574 Daucus carota HOM05D000738 ORTHO05D000675 4.6e-08 62.0 95 42.1
Manes.08G047800 Manihot esculenta HOM05D000738 ORTHO05D000675 4.6e-08 62.0 84 44.0
Actinidia09363 Actinidia chinensis HOM05D000738 ORTHO05D000675 6.0e-08 61.6 87 44.8
Duzib168G2329 Durio zibethinus HOM05D000738 ORTHO05D000675 7.9e-08 61.2 82 47.6
Potri.006G056300 Populus trichocarpa HOM05D000738 ORTHO05D000675 1.0e-07 60.8 83 45.8
Actinidia20287 Actinidia chinensis HOM05D000738 ORTHO05D000675 1.3e-07 60.5 85 44.7
Sabra06G0039800 Salix brachista HOM05D000738 ORTHO05D004372 1.3e-07 60.5 83 45.8
Potri.003G205400 Populus trichocarpa HOM05D000738 ORTHO05D000675 1.8e-07 60.1 71 47.9
ClCG04G000580 Citrullus lanatus HOM05D000738 ORTHO05D000675 2.3e-07 59.7 82 41.5
Potri.016G051900 Populus trichocarpa HOM05D000738 ORTHO05D000675 2.3e-07 59.7 83 44.6
Duzib106G1391 Durio zibethinus HOM05D000738 ORTHO05D000675 3.0e-07 59.3 70 48.6
Potri.001G018700 Populus trichocarpa HOM05D000738 ORTHO05D000675 3.9e-07 58.9 71 46.5
Sed0013343 Sechium edule HOM05D000738 ORTHO05D000675 5.1e-07 58.5 96 42.7
Prupe.7G068700 Prunus persica HOM05D000738 ORTHO05D000675 6.7e-07 58.2 72 48.6
Sed0010581 Sechium edule HOM05D000738 ORTHO05D000675 6.7e-07 58.2 109 39.4
HPP92_015772 Vanilla planifolia HOM05D000738 ORTHO05D023254 6.7e-07 58.2 84 44.0
Sabra01G0013300 Salix brachista HOM05D000738 ORTHO05D000675 1.1e-06 57.4 71 46.5
MELO3C009063.2 Cucumis melo HOM05D000738 ORTHO05D000675 1.5e-06 57.0 115 38.3
Manes.09G029900 Manihot esculenta HOM05D000738 ORTHO05D000675 1.9e-06 56.6 129 33.3
Gohir.A09G124500 Gossypium hirsutum HOM05D000738 ORTHO05D000675 3.3e-06 55.8 78 42.3
Gohir.D09G121500 Gossypium hirsutum HOM05D000738 ORTHO05D000675 3.3e-06 55.8 78 42.3
Gorai.006G139000 Gossypium raimondii HOM05D000738 ORTHO05D000675 3.3e-06 55.8 78 42.3
Hma1.2p1_0621F.1_g190600 Hydrangea macrophylla HOM05D000738 ORTHO05D000675 3.3e-06 55.8 69 49.3
CANSAT80G0761 Cannabis sativa HOM05D000738 ORTHO05D000675 4.3e-06 55.5 113 35.4
CAN.G115.7 Capsicum annuum HOM05D000738 ORTHO05D000675 4.3e-06 55.5 122 32.0
Gorai.004G018800 Gossypium raimondii HOM05D000738 ORTHO05D000675 4.3e-06 55.5 66 48.5
TPR.G22786 Trifolium pratense HOM05D000738 ORTHO05D000675 4.3e-06 55.5 90 42.2
Sabra16G0055500 Salix brachista HOM05D000738 ORTHO05D004372 5.6e-06 55.1 79 44.3
Gohir.A08G013100 Gossypium hirsutum HOM05D000738 ORTHO05D000675 7.4e-06 54.7 66 48.5
Gohir.D08G023500 Gossypium hirsutum HOM05D000738 ORTHO05D000675 9.6e-06 54.3 62 50.0
Lj5g0022925 Lotus japonicus HOM05D000738 ORTHO05D000675 9.6e-06 54.3 75 45.3


User provided reference genes

Program Settings