Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g15307 Nelumbo nucifera HOM05D001393 ORTHO05D007477 0.0e+00 1693.3 894 100.0
TAR623G0231 Trochodendron aralioides HOM05D001393 ORTHO05D007477 3.8e-155 553.1 583 57.1
Cfa010777 Carpinus fangiana HOM05D001393 ORTHO05D007477 1.3e-139 501.5 912 39.8
GSVIVG01032121001 Vitis vinifera HOM05D001393 ORTHO05D007477 2.5e-130 470.7 849 40.5
Actinidia21547 Actinidia chinensis HOM05D001393 ORTHO05D007477 3.1e-128 463.8 908 37.9
Dinv09348 Davidia involucrata HOM05D001393 ORTHO05D007477 4.9e-126 456.4 964 37.2
Prupe.2G015000 Prunus persica HOM05D001393 ORTHO05D007477 3.5e-124 450.3 887 38.9
MBI04_g36081_MAGBIO Magnolia biondii HOM05D001393 ORTHO05D007477 1.7e-123 448.0 1027 35.2
QL04p008271 Quercus lobata HOM05D001393 ORTHO05D007477 1.1e-122 445.3 919 38.2
CiPaw.14G000700 Carya illinoinensis HOM05D001393 ORTHO05D007477 2.1e-121 441.0 909 38.8
Thecc.01G409700 Theobroma cacao HOM05D001393 ORTHO05D007477 2.9e-118 430.6 934 37.5
COL.COLO4_04862 Corchorus olitorius HOM05D001393 ORTHO05D007477 4.9e-118 429.9 933 36.5
Potri.001G265100 Populus trichocarpa HOM05D001393 ORTHO05D007477 6.0e-116 422.9 924 36.6
Atru.chr11.2612 Acer truncatum HOM05D001393 ORTHO05D007477 5.1e-115 419.9 894 36.9
Manes.10G141000 Manihot esculenta HOM05D001393 ORTHO05D007477 1.1e-114 418.7 909 35.9
vmacro13675 Vaccinium macrocarpon HOM05D001393 ORTHO05D007477 3.3e-114 417.2 913 36.7
MD02G1309200 Malus domestica HOM05D001393 ORTHO05D007477 1.1e-112 412.1 897 36.2
FAN06G3336 Fragaria x ananassa HOM05D001393 ORTHO05D007477 2.9e-110 404.1 883 36.4
FvH4_7g01170 Fragaria vesca HOM05D001393 ORTHO05D007477 4.9e-110 403.3 883 36.4
RcHm_v2.0_Chr1g0316471 Rosa chinensis HOM05D001393 ORTHO05D007477 1.2e-108 398.7 893 36.2
Sabra16G0162900 Salix brachista HOM05D001393 ORTHO05D007477 2.3e-107 394.4 929 35.7
FAN03G3510 Fragaria x ananassa HOM05D001393 ORTHO05D007477 1.9e-106 391.3 882 36.2
Duzib133G0545 Durio zibethinus HOM05D001393 ORTHO05D007477 3.1e-104 384.0 907 35.5
Potri.009G060000 Populus trichocarpa HOM05D001393 ORTHO05D007477 1.5e-103 381.7 666 40.5
CSS0038724 Camellia sinensis var. sinensis HOM05D001393 ORTHO05D007477 2.6e-103 380.9 656 40.2
FAN03G1765 Fragaria x ananassa HOM05D001393 ORTHO05D007477 4.4e-103 380.2 905 35.4
Cpa.g.sc125.11 Carica papaya HOM05D001393 ORTHO05D007477 4.2e-101 373.6 884 35.9
Ciclev10030722m.g Citrus clementina HOM05D001393 ORTHO05D007477 2.1e-100 371.3 878 34.7
FAN01G2686 Fragaria x ananassa HOM05D001393 ORTHO05D007477 2.1e-100 371.3 881 35.4
CANSAT80G1121 Cannabis sativa HOM05D001393 ORTHO05D007477 2.5e-98 364.4 925 33.1
Gohir.A08G143900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 2.5e-98 364.4 923 33.9
Gohir.D08G164900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 5.6e-98 363.2 931 33.9
Gorai.004G171900 Gossypium raimondii HOM05D001393 ORTHO05D007477 2.8e-97 360.9 953 33.4
TWI09G0484 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 1.1e-96 359.0 686 39.7
Aqoxy1G00280 Aquilegia oxysepala HOM05D001393 ORTHO05D007477 1.5e-95 355.1 622 40.8
ClCG09G004070 Citrullus lanatus HOM05D001393 ORTHO05D007477 4.5e-95 353.6 877 34.2
Sed0015725 Sechium edule HOM05D001393 ORTHO05D007477 4.5e-95 353.6 923 34.0
PSO339G5226 Papaver somniferum HOM05D001393 ORTHO05D007477 1.3e-94 352.1 1027 33.2
Eucgr.J01280 Eucalyptus grandis HOM05D001393 ORTHO05D007477 3.5e-92 344.0 893 32.8
Sc11g0009120 Simmondsia chinensis HOM05D001393 ORTHO05D007477 7.9e-92 342.8 850 34.4
PSO384G0142 Papaver somniferum HOM05D001393 ORTHO05D007477 1.0e-91 342.4 1031 32.2
PGR044G2234 Punica granatum HOM05D001393 ORTHO05D007477 1.3e-91 342.0 891 33.7
Sopen11g002980 Solanum pennellii HOM05D001393 ORTHO05D007477 3.0e-91 340.9 903 33.8
TWI73G0713 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 3.0e-91 340.9 1072 30.8
PGSC0003DMG401023992 Solanum tuberosum HOM05D001393 ORTHO05D007477 6.7e-91 339.7 923 32.9
MELO3C023559.2 Cucumis melo HOM05D001393 ORTHO05D007477 3.3e-90 337.4 931 32.8
CsaV3_7G030970 Cucumis sativus L. HOM05D001393 ORTHO05D007477 1.6e-89 335.1 869 34.1
AUR62023073 Chenopodium quinoa HOM05D001393 ORTHO05D007477 8.1e-89 332.8 914 32.5
Solyc11g007060.2 Solanum lycopersicum HOM05D001393 ORTHO05D007477 8.1e-89 332.8 903 32.9
SalBow7G4183 Salvia bowleyana HOM05D001393 ORTHO05D007477 1.5e-87 328.6 915 33.2
Glyma.09G228900 Glycine max HOM05D001393 ORTHO05D007477 3.4e-87 327.4 875 32.9
MD07G1012500 Malus domestica HOM05D001393 ORTHO05D007477 1.1e-85 322.4 765 35.4
Cc02_g28120 Coffea canephora HOM05D001393 ORTHO05D007477 2.4e-85 321.2 548 40.7
Oeu049495.1 Olea europaea HOM05D001393 ORTHO05D007477 2.4e-85 321.2 950 31.3
CAN.G1513.5 Capsicum annuum HOM05D001393 ORTHO05D007477 1.2e-84 318.9 929 31.3
VMungo1127G2137 Vigna mungo HOM05D001393 ORTHO05D007477 2.1e-84 318.2 656 38.0
Lj3g0000057 Lotus japonicus HOM05D001393 ORTHO05D007477 3.5e-84 317.4 874 31.7
EL10Ac2g04339 Beta vulgaris HOM05D001393 ORTHO05D007477 7.9e-84 316.2 944 31.0
arahy.Tifrunner.gnm1.ann1.C4Q3NJ Arachis hypogaea HOM05D001393 ORTHO05D007477 1.8e-83 315.1 894 31.7
arahy.Tifrunner.gnm1.ann1.S6CP9J Arachis hypogaea HOM05D001393 ORTHO05D007477 5.1e-83 313.5 882 31.9
Glyma.12G007700 Glycine max HOM05D001393 ORTHO05D007477 1.5e-82 312.0 890 32.2
Psat7g196360 Pisum sativum HOM05D001393 ORTHO05D007477 1.3e-81 308.9 618 39.2
DCAR_029678 Daucus carota HOM05D001393 ORTHO05D007477 4.0e-80 303.9 603 37.8
Phvul.011G009600 Phaseolus vulgaris HOM05D001393 ORTHO05D007477 4.0e-80 303.9 582 39.5
Sabra09G0044200 Salix brachista HOM05D001393 ORTHO05D007477 2.6e-79 301.2 721 35.0
TPR.G3660 Trifolium pratense HOM05D001393 ORTHO05D007477 3.4e-79 300.8 922 34.1
Medtr4g037495 Medicago truncatula HOM05D001393 ORTHO05D007477 4.5e-79 300.4 911 31.0
Nitab4.5_0001761g0330 Nicotiana tabacum HOM05D001393 ORTHO05D007477 5.8e-79 300.1 903 31.2
AUR62009391 Chenopodium quinoa HOM05D001393 ORTHO05D007477 7.6e-79 299.7 932 32.3
Nitab4.5_0000001g0230 Nicotiana tabacum HOM05D001393 ORTHO05D007477 1.3e-78 298.9 869 32.8
Ca_19581_v3 Cicer arietinum L. HOM05D001393 ORTHO05D007477 2.5e-77 294.7 886 31.9
MSTRG.28063 Avicennia marina HOM05D001393 ORTHO05D007477 1.2e-76 292.4 968 30.0
Migut.N01605 Erythranthe guttata HOM05D001393 ORTHO05D007477 1.2e-76 292.4 905 32.3
Dinv43433 Davidia involucrata HOM05D001393 ORTHO05D007477 5.1e-75 287.0 275 56.4
Hund21482 Selenicereus undatus HOM05D001393 ORTHO05D007477 5.1e-75 287.0 957 29.5
Peaxi162Scf00152g01336 Petunia axillaris HOM05D001393 ORTHO05D007477 5.7e-74 283.5 1009 29.6
SGA_v2.0_scaffold5G02964 Striga asiatica HOM05D001393 ORTHO05D007477 7.4e-74 283.1 849 30.4
MSTRG.5028 Avicennia marina HOM05D001393 ORTHO05D007477 4.6e-68 263.8 878 29.7
Lalb_Chr19g0140311 Lupinus albus HOM05D001393 ORTHO05D007477 7.9e-68 263.1 901 32.1
SalBow6G6124 Salvia bowleyana HOM05D001393 ORTHO05D007477 5.1e-67 260.4 653 33.8
A06p39440 Brassica napus HOM05D001393 ORTHO05D007477 6.7e-67 260.0 827 29.9
BraA06t26859Z Brassica rapa HOM05D001393 ORTHO05D007477 6.7e-67 260.0 827 29.9
HanXRQChr09g0251311 Helianthus annuus HOM05D001393 ORTHO05D007477 6.9e-64 250.0 815 31.5
HPP92_015712 Vanilla planifolia HOM05D001393 ORTHO05D007477 6.9e-64 250.0 590 35.4
Sp2g18440 Schrenkiella parvula HOM05D001393 ORTHO05D007477 9.1e-64 249.6 925 29.0
Aa31LG11G7400 Aethionema arabicum HOM05D001393 ORTHO05D007477 1.7e-62 245.4 881 28.1
HPP92_026649 Vanilla planifolia HOM05D001393 ORTHO05D007477 2.2e-62 245.0 589 35.0
Thhalv10003674m.g Eutrema salsugineum HOM05D001393 ORTHO05D007477 1.4e-61 242.3 921 28.7
Carub.0008s0749 Capsella rubella HOM05D001393 ORTHO05D007477 7.2e-61 240.0 739 30.7
Duzib138G1437 Durio zibethinus HOM05D001393 ORTHO05D007477 5.1e-59 233.8 715 31.9
AL8G20040 Arabidopsis lyrata HOM05D001393 ORTHO05D007477 1.1e-58 232.6 887 28.7
Lsat_1_v5_gn_1_106561 Lactuca sativa HOM05D001393 ORTHO05D007477 2.6e-58 231.5 440 38.4
AT5G47940 Arabidopsis thaliana HOM05D001393 ORTHO05D007477 5.7e-58 230.3 863 27.9
BolC7t44402H Brassica oleracea HOM05D001393 ORTHO05D007477 5.7e-58 230.3 887 28.1
C07p38830 Brassica napus HOM05D001393 ORTHO05D007477 7.4e-58 229.9 888 28.0
CDE05G0268 Ceratophyllum demersum HOM05D001393 ORTHO05D007477 4.1e-56 224.2 623 32.4
Os07g0569000 Oryza sativa ssp. japonica HOM05D001393 ORTHO05D007477 3.2e-53 214.5 707 29.6
unitig_578.g16692 Utricularia gibba HOM05D001393 ORTHO05D007477 3.6e-52 211.1 931 27.0
CARHR184320 Cardamine hirsuta HOM05D001393 ORTHO05D007477 2.3e-51 208.4 605 31.2
Zm00001eb107220 Zea mays HOM05D001393 ORTHO05D007477 3.0e-51 208.0 642 30.2
ATR0332G069 Amborella trichopoda HOM05D001393 ORTHO05D007477 5.7e-50 203.8 700 31.9
BcaC06g30834 Brassica carinata HOM05D001393 ORTHO05D007477 1.6e-47 195.7 670 28.2
Zm00001eb324710 Zea mays HOM05D001393 ORTHO05D007477 5.9e-47 193.7 643 28.9
Lj9A633T62 Lonicera japonica HOM05D001393 ORTHO05D007477 6.1e-44 183.7 739 29.6
TAR623G1737 Trochodendron aralioides HOM05D001393 ORTHO05D007477 6.7e-43 180.3 325 40.3
Ah.10g038800 Amaranthus hybridus HOM05D001393 ORTHO05D007477 1.1e-40 172.9 672 29.5
FAN10G3273 Fragaria x ananassa HOM05D001393 ORTHO05D007477 2.4e-40 171.8 166 57.2
ECA248G1228 Erigeron canadensis HOM05D001393 ORTHO05D007477 2.9e-30 138.3 432 30.3
Eucgr.J01288 Eucalyptus grandis HOM05D001393 ORTHO05D007477 4.4e-18 97.8 153 41.2
SEGI_04113 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 2.4e-16 92.0 387 25.6
SEGI_08002 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 2.4e-16 92.0 387 25.6
Dinv43434 Davidia involucrata HOM05D001393 ORTHO05D007477 6.6e-14 84.0 225 34.7
SEGI_29291 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 9.5e-13 80.1 710 21.8
Dinv43435 Davidia involucrata HOM05D001393 ORTHO05D007477 4.0e-11 74.7 158 33.5
SEGI_24281 Sequoiadendron giganteum HOM05D000890 ORTHO05D007477 1.7e-09 69.3 452 24.1
Mapoly0003s0122 Marchantia polymorpha HOM05D020720 ORTHO05D007477 2.7e-07 62.0 112 39.3
FvH4_5g06191 Fragaria vesca HOM05D001393 ORTHO05D007477 3.9e-06 58.2 64 53.1


User provided reference genes

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