Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g15281 Nelumbo nucifera HOM05D002304 ORTHO05D002363 4.3e-124 448.0 220 100.0
TAR622G0924 Trochodendron aralioides HOM05D002304 ORTHO05D002363 1.0e-61 240.7 215 61.4
Dinv38639 Davidia involucrata HOM05D002304 ORTHO05D002363 9.4e-55 217.6 216 54.2
Dinv17461 Davidia involucrata HOM05D002304 ORTHO05D002363 2.6e-52 209.5 201 57.7
Atru.chr9.440 Acer truncatum HOM05D002304 ORTHO05D002363 1.5e-44 183.7 200 51.5
Duzib068G0189 Durio zibethinus HOM05D002304 ORTHO05D002363 4.8e-43 178.7 211 49.8
CSS0002586 Camellia sinensis var. sinensis HOM05D002304 ORTHO05D002363 8.2e-43 177.9 210 50.5
QL10p020791 Quercus lobata HOM05D002304 ORTHO05D002363 8.2e-43 177.9 216 47.2
Nn2g15282 Nelumbo nucifera HOM05D002304 ORTHO05D002363 1.1e-42 177.6 103 87.4
Duzib205G0125 Durio zibethinus HOM05D002304 ORTHO05D002363 3.1e-42 176.0 222 48.2
Thecc.03G109300 Theobroma cacao HOM05D002304 ORTHO05D002363 3.1e-42 176.0 211 48.8
Ciclev10021188m.g Citrus clementina HOM05D002304 ORTHO05D002363 7.7e-41 171.4 205 50.2
COL.COLO4_24292 Corchorus olitorius HOM05D002304 ORTHO05D002363 2.1e-38 163.3 211 46.4
Manes.06G080500 Manihot esculenta HOM05D002304 ORTHO05D002363 8.8e-37 157.9 229 43.2
Gorai.001G066900 Gossypium raimondii HOM05D002304 ORTHO05D002363 5.4e-34 148.7 224 43.8
Gohir.A07G058500 Gossypium hirsutum HOM05D002304 ORTHO05D002363 2.0e-33 146.7 213 44.1
Cpa.g.sc3.228 Carica papaya HOM05D002304 ORTHO05D002363 3.5e-33 146.0 200 45.5
Cc04_g08240 Coffea canephora HOM05D002304 ORTHO05D002363 3.5e-33 146.0 205 41.5
Gohir.D07G063400 Gossypium hirsutum HOM05D002304 ORTHO05D002363 3.5e-33 146.0 213 44.1
Gorai.003G103200 Gossypium raimondii HOM05D002304 ORTHO05D002363 8.5e-32 141.4 205 45.4
Gohir.A03G071500 Gossypium hirsutum HOM05D002304 ORTHO05D002363 1.9e-31 140.2 213 43.2
Gohir.D03G098100 Gossypium hirsutum HOM05D002304 ORTHO05D002363 1.9e-31 140.2 205 44.9
MBI15_g04988_MAGBIO Magnolia biondii HOM05D002304 ORTHO05D002363 5.2e-29 132.1 259 38.6
TWI81G0902 Tripterygium wilfordii HOM05D002304 ORTHO05D002363 5.2e-29 132.1 196 43.9
PSO478G2317 Papaver somniferum HOM05D002304 ORTHO05D002363 9.8e-28 127.9 203 45.3
PSO017G5758 Papaver somniferum HOM05D002304 ORTHO05D002363 9.2e-26 121.3 203 44.3
PSO017G5249 Papaver somniferum HOM05D002304 ORTHO05D002363 1.2e-25 120.9 203 44.3
ClCG06G015410 Citrullus lanatus HOM05D002304 ORTHO05D002363 1.9e-23 113.6 206 40.8
CsaV3_1G003310 Cucumis sativus L. HOM05D002304 ORTHO05D002363 4.7e-22 109.0 206 40.8
MELO3C017254.2 Cucumis melo HOM05D002304 ORTHO05D002363 8.0e-22 108.2 206 40.8
Sed0003351 Sechium edule HOM05D002304 ORTHO05D002363 3.0e-21 106.3 205 39.5
Sed0007661 Sechium edule HOM05D002304 ORTHO05D002363 1.7e-19 100.5 209 36.8
Eucgr.K02629 Eucalyptus grandis HOM05D002304 ORTHO05D002363 7.8e-17 91.7 201 36.3
CDE02G2516 Ceratophyllum demersum HOM05D002304 ORTHO05D002363 1.5e-12 77.4 199 30.2
CDE01G0585 Ceratophyllum demersum HOM05D002304 ORTHO05D002363 1.7e-11 73.9 202 29.7
PGR083G0760 Punica granatum HOM05D002304 ORTHO05D002363 8.3e-11 71.6 166 34.9
HanXRQChr16g0502201 Helianthus annuus HOM05D002304 ORTHO05D002363 1.6e-06 57.4 172 33.1
Lsat_1_v5_gn_4_113580 Lactuca sativa HOM05D002304 ORTHO05D002363 3.6e-06 56.2 103 42.7


User provided reference genes

Program Settings