Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g15275 Nelumbo nucifera HOM05D005390 ORTHO05D007086 3.2e-133 478.4 240 100.0
Nn8g40909 Nelumbo nucifera HOM05D005390 ORTHO05D007086 6.1e-108 394.4 313 69.3
Nn4g22507 Nelumbo nucifera HOM05D005390 ORTHO05D007086 1.2e-90 337.0 200 85.5
Nn1g08373 Nelumbo nucifera HOM05D005390 ORTHO05D007086 3.0e-86 322.4 296 62.5
Nn8g39688 Nelumbo nucifera HOM05D005390 ORTHO05D007086 8.0e-84 314.3 200 80.0
TAR374G1738 Trochodendron aralioides HOM05D005390 ORTHO05D007086 5.0e-78 295.0 200 75.5
Nn5g27251 Nelumbo nucifera HOM05D005390 ORTHO05D007086 1.9e-77 293.1 378 49.7
TWI09G0451 Tripterygium wilfordii HOM05D005390 ORTHO05D007086 5.2e-75 285.0 200 70.5
Dinv38486 Davidia involucrata HOM05D005390 ORTHO05D007086 8.9e-75 284.3 200 71.5
TWI39G0214 Tripterygium wilfordii HOM05D005390 ORTHO05D007086 1.5e-74 283.5 200 70.0
Nn5g28724 Nelumbo nucifera HOM05D005390 ORTHO05D007086 3.7e-73 278.9 194 76.3
QL10p005602 Quercus lobata HOM05D005390 ORTHO05D007086 1.9e-72 276.6 200 70.0
Manes.06G113700 Manihot esculenta HOM05D005390 ORTHO05D007086 2.4e-72 276.2 200 70.0
CANSAT80G2255 Cannabis sativa HOM05D005390 ORTHO05D007086 1.2e-71 273.9 200 68.0
HanXRQChr09g0272781 Helianthus annuus HOM05D005390 ORTHO05D007086 2.7e-71 272.7 197 68.0
ECA232G3921 Erigeron canadensis HOM05D005390 ORTHO05D007086 3.5e-71 272.3 197 67.5
Lj9C473T10 Lonicera japonica HOM05D005390 ORTHO05D007086 1.0e-70 270.8 200 69.0
Haze_07289 Corylus avellana HOM05D005390 ORTHO05D007086 1.3e-70 270.4 200 66.5
GSVIVG01007574001 Vitis vinifera HOM05D005390 ORTHO05D007086 1.3e-70 270.4 200 69.0
FAN13G2995 Fragaria x ananassa HOM05D005390 ORTHO05D007086 5.1e-70 268.5 200 66.5
Hma1.2p1_0983F.1_g244080 Hydrangea macrophylla HOM05D005390 ORTHO05D007086 5.1e-70 268.5 200 67.5
Aqoxy3G01354 Aquilegia oxysepala HOM05D005390 ORTHO05D007086 8.6e-70 267.7 208 67.8
Rhsim08G0183100 Rhododendron simsii HOM05D005390 ORTHO05D007086 1.1e-69 267.3 200 67.5
Cc04_g10660 Coffea canephora HOM05D005390 ORTHO05D007086 1.9e-69 266.5 197 69.0
DCAR_016426 Daucus carota HOM05D005390 ORTHO05D007086 1.9e-69 266.5 208 65.9
vmacro19255 Vaccinium macrocarpon HOM05D005390 ORTHO05D007086 1.9e-69 266.5 200 66.5
Cfa018904 Carpinus fangiana HOM05D005390 ORTHO05D007086 2.5e-69 266.2 200 65.5
COL.COLO4_04551 Corchorus olitorius HOM05D005390 ORTHO05D007086 2.5e-69 266.2 200 66.5
Sabra12G0066700 Salix brachista HOM05D005390 ORTHO05D007086 2.5e-69 266.2 213 64.8
ATR0824G019 Amborella trichopoda HOM05D005390 ORTHO05D007086 5.6e-69 265.0 208 64.4
Potri.012G092000 Populus trichocarpa HOM05D005390 ORTHO05D007086 5.6e-69 265.0 213 64.8
Thecc.03G120800 Theobroma cacao HOM05D005390 ORTHO05D007086 5.6e-69 265.0 208 65.9
FAN18G2367 Fragaria x ananassa HOM05D005390 ORTHO05D007086 7.3e-69 264.6 203 66.0
FAN04G1107 Fragaria x ananassa HOM05D005390 ORTHO05D007086 1.2e-68 263.8 200 66.0
MD06G1160400 Malus domestica HOM05D005390 ORTHO05D007086 2.8e-68 262.7 201 65.2
RcHm_v2.0_Chr7g0191501 Rosa chinensis HOM05D005390 ORTHO05D007086 8.1e-68 261.2 200 66.0
PSO017G5335 Papaver somniferum HOM05D005390 ORTHO05D007086 1.4e-67 260.4 200 67.0
Prupe.5G160000 Prunus persica HOM05D005390 ORTHO05D007086 1.4e-67 260.4 201 65.7
Peaxi162Scf00763g00330 Petunia axillaris HOM05D005390 ORTHO05D007086 1.8e-67 260.0 208 64.4
PGSC0003DMG400027069 Solanum tuberosum HOM05D005390 ORTHO05D007086 1.8e-67 260.0 208 63.9
Nn1g05493 Nelumbo nucifera HOM05D005390 ORTHO05D007086 2.3e-67 259.6 200 69.5
Nitab4.5_0000003g0930 Nicotiana tabacum HOM05D005390 ORTHO05D007086 2.3e-67 259.6 208 63.5
Lsat_1_v5_gn_4_78320 Lactuca sativa HOM05D005390 ORTHO05D007086 4.0e-67 258.8 210 63.3
Sopen06g028130 Solanum pennellii HOM05D005390 ORTHO05D007086 4.0e-67 258.8 211 62.6
PSO478G4661 Papaver somniferum HOM05D005390 ORTHO05D007086 6.8e-67 258.1 200 66.0
CAN.G1046.1 Capsicum annuum HOM05D005390 ORTHO05D007086 8.9e-67 257.7 211 61.6
Solyc06g071850.3 Solanum lycopersicum HOM05D005390 ORTHO05D007086 1.5e-66 256.9 197 65.0
Duzib205G1771 Durio zibethinus HOM05D005390 ORTHO05D007086 2.0e-66 256.5 203 65.5
Actinidia19375 Actinidia chinensis HOM05D005390 ORTHO05D007086 3.4e-66 255.8 209 62.7
Gohir.D12G190300 Gossypium hirsutum HOM05D005390 ORTHO05D007086 5.8e-66 255.0 201 65.2
Gohir.A12G187300 Gossypium hirsutum HOM05D005390 ORTHO05D007086 7.6e-66 254.6 201 65.2
Gorai.008G204100 Gossypium raimondii HOM05D005390 ORTHO05D007086 7.6e-66 254.6 201 65.2
MELO3C002325.2 Cucumis melo HOM05D005390 ORTHO05D007086 1.3e-65 253.8 200 62.5
Oeu011587.1 Olea europaea HOM05D005390 ORTHO05D007086 1.7e-65 253.4 208 64.4
Thhalv10003779m.g Eutrema salsugineum HOM05D005390 ORTHO05D007086 2.2e-65 253.1 199 61.8
Oeu053506.1 Olea europaea HOM05D005390 ORTHO05D007086 2.2e-65 253.1 200 65.5
Psat5g139480 Pisum sativum HOM05D005390 ORTHO05D007086 2.2e-65 253.1 200 65.0
ClCG03G003390 Citrullus lanatus HOM05D005390 ORTHO05D007086 2.9e-65 252.7 200 62.0
Nitab4.5_0014349g0010 Nicotiana tabacum HOM05D005390 ORTHO05D007086 3.8e-65 252.3 208 62.0
CsaV3_1G009190 Cucumis sativus L. HOM05D005390 ORTHO05D007086 4.9e-65 251.9 200 61.5
Glyma.04G191600 Glycine max HOM05D005390 ORTHO05D007086 4.9e-65 251.9 201 62.7
Lalb_Chr11g0069761 Lupinus albus HOM05D005390 ORTHO05D007086 4.9e-65 251.9 191 66.5
Sp2g26330 Schrenkiella parvula HOM05D005390 ORTHO05D007086 4.9e-65 251.9 199 61.8
Atru.BG.198.p Acer truncatum HOM05D005390 ORTHO05D007086 8.4e-65 251.1 208 61.5
Sed0027546 Sechium edule HOM05D005390 ORTHO05D007086 1.1e-64 250.8 200 60.0
Aa31LG1G18770 Aethionema arabicum HOM05D005390 ORTHO05D007086 9.2e-64 247.7 211 58.3
AL8G40290 Arabidopsis lyrata HOM05D005390 ORTHO05D007086 9.2e-64 247.7 190 62.6
Glyma.06G174300 Glycine max HOM05D005390 ORTHO05D007086 1.2e-63 247.3 200 61.5
THA.LOC104818200 Tarenaya hassleriana HOM05D005390 ORTHO05D007086 1.6e-63 246.9 191 64.9
Lj1g0026120 Lotus japonicus HOM05D005390 ORTHO05D007086 2.1e-63 246.5 200 62.0
Phvul.009G170000 Phaseolus vulgaris HOM05D005390 ORTHO05D007086 2.7e-63 246.1 213 60.1
Carub.0008s2396 Capsella rubella HOM05D005390 ORTHO05D007086 3.5e-63 245.7 197 60.4
AUR62001260 Chenopodium quinoa HOM05D005390 ORTHO05D007086 3.5e-63 245.7 197 64.5
Eucgr.B00166 Eucalyptus grandis HOM05D005390 ORTHO05D007086 4.6e-63 245.4 200 60.5
Medtr3g075240 Medicago truncatula HOM05D005390 ORTHO05D007086 1.0e-62 244.2 200 63.0
AUR62025748 Chenopodium quinoa HOM05D005390 ORTHO05D007086 2.3e-62 243.0 197 64.0
Ciclev10019194m.g Citrus clementina HOM05D005390 ORTHO05D007086 2.3e-62 243.0 183 66.1
VMungo1309G2389 Vigna mungo HOM05D005390 ORTHO05D007086 2.3e-62 243.0 200 60.5
FAN08G1670 Fragaria x ananassa HOM05D005390 ORTHO05D007086 5.1e-62 241.9 194 63.9
EL10Ac7g18053 Beta vulgaris HOM05D005390 ORTHO05D007086 8.6e-62 241.1 252 52.8
arahy.Tifrunner.gnm1.ann1.EKVH9G Arachis hypogaea HOM05D005390 ORTHO05D007086 1.5e-61 240.4 208 60.6
arahy.Tifrunner.gnm1.ann1.V8X883 Arachis hypogaea HOM05D005390 ORTHO05D007086 2.5e-61 239.6 260 50.0
MSTRG.11518 Avicennia marina HOM05D005390 ORTHO05D007086 4.3e-61 238.8 208 61.1
SGA_v2.0_scaffold25G10792 Striga asiatica HOM05D005390 ORTHO05D007086 9.6e-61 237.7 191 61.8
Ca_16101_v3 Cicer arietinum L. HOM05D005390 ORTHO05D007086 1.2e-60 237.3 208 59.6
Ca_30077_v3 Cicer arietinum L. HOM05D005390 ORTHO05D007086 1.2e-60 237.3 208 59.6
PGR083G1300 Punica granatum HOM05D005390 ORTHO05D007086 1.6e-60 236.9 200 57.0
SEGI_06673 Sequoiadendron giganteum HOM05D005390 ORTHO05D007086 1.8e-59 233.4 207 58.9
TPR.G38664 Trifolium pratense HOM05D005390 ORTHO05D007086 2.4e-59 233.0 226 55.3
AT5G63200 Arabidopsis thaliana HOM05D005390 ORTHO05D007086 3.4e-58 229.2 188 60.6
Zm00001eb144210 Zea mays HOM05D005390 ORTHO05D007086 3.4e-58 229.2 209 55.0
Hund05621 Selenicereus undatus HOM05D005390 ORTHO05D007086 2.2e-57 226.5 197 58.9
Cpa.g.sc4.44 Carica papaya HOM05D005390 ORTHO05D007086 8.4e-57 224.6 183 60.7
unitig_22.g5443 Utricularia gibba HOM05D005390 ORTHO05D007086 4.2e-56 222.2 208 56.2
C09p09230 Brassica napus HOM05D005390 ORTHO05D007086 1.2e-55 220.7 191 59.2
BolC9t53836H Brassica oleracea HOM05D005390 ORTHO05D007086 1.2e-55 220.7 191 59.2
BraA09t36469Z Brassica rapa HOM05D005390 ORTHO05D007086 7.8e-55 218.0 182 59.3
A09p08180 Brassica napus HOM05D005390 ORTHO05D007086 3.0e-54 216.1 182 59.3
Nn8g40618 Nelumbo nucifera HOM05D005390 ORTHO05D007086 3.9e-54 215.7 132 80.3
HPP92_001962 Vanilla planifolia HOM05D005390 ORTHO05D007086 9.6e-53 211.1 197 54.8
SMO356G0210 Selaginella moellendorffii HOM05D005390 ORTHO05D007086 1.5e-50 203.8 197 53.8
SalBow5G1843 Salvia bowleyana HOM05D005390 ORTHO05D007086 9.9e-50 201.1 228 51.3
Os01g0906600 Oryza sativa ssp. japonica HOM05D005390 ORTHO05D007086 1.3e-49 200.7 179 54.7
FvH4_5g07030 Fragaria vesca HOM05D005390 ORTHO05D007086 5.4e-48 195.3 144 64.6
Mapoly0013s0178 Marchantia polymorpha HOM05D005390 ORTHO05D007086 2.1e-47 193.4 200 49.0
AagrBONN_evm.TU.Sc2ySwM_228.344 Anthoceros agrestis HOM05D005390 ORTHO05D007086 1.0e-46 191.0 192 51.6
CSS0013940 Camellia sinensis var. sinensis HOM05D005390 ORTHO05D007086 1.0e-46 191.0 129 71.3
Nn6g32370 Nelumbo nucifera HOM05D005390 ORTHO05D007086 1.1e-45 187.6 131 73.3
Sc22g0003910 Simmondsia chinensis HOM05D005390 ORTHO05D007086 3.7e-44 182.6 163 59.5
Nn7g37481 Nelumbo nucifera HOM05D005390 ORTHO05D007086 1.4e-40 170.6 101 84.2
Nn1g03252 Nelumbo nucifera HOM05D005390 ORTHO05D007086 3.3e-29 132.9 71 91.5
Nn2g14552 Nelumbo nucifera HOM05D005390 ORTHO05D028071 2.6e-26 123.2 63 93.7
Nn1g06247 Nelumbo nucifera HOM05D005390 ORTHO05D007086 4.5e-26 122.5 95 69.5
CAN.G1302.1 Capsicum annuum HOM05D005390 ORTHO05D002902 2.2e-20 103.6 71 63.4
Nn5g26726 Nelumbo nucifera HOM05D005390 ORTHO05D007086 4.8e-20 102.4 77 71.4
CAN.G534.23 Capsicum annuum HOM05D005390 ORTHO05D007086 2.4e-19 100.1 93 51.6
Migut.O00224 Erythranthe guttata HOM05D005390 ORTHO05D007086 2.0e-18 97.1 94 52.1
CiPaw.12G034500 Carya illinoinensis HOM05D005390 ORTHO05D007086 1.7e-17 94.0 58 77.6
CsaV3_3G015420 Cucumis sativus L. HOM05D005390 ORTHO05D007086 7.2e-16 88.6 66 62.1
CiPaw.12G034400 Carya illinoinensis HOM05D005390 ORTHO05D007086 6.1e-15 85.5 64 64.1
TAR381G0053 Trochodendron aralioides HOM05D000018 ORTHO05D001172 7.9e-15 85.1 122 40.2
Hma1.2p1_2683F.1_g326880 Hydrangea macrophylla HOM05D005390 ORTHO05D007086 1.4e-14 84.3 49 81.6
CSS0032502 Camellia sinensis var. sinensis HOM05D005390 ORTHO05D007086 8.8e-14 81.6 48 81.2
CSS0049807 Camellia sinensis var. sinensis HOM05D005390 ORTHO05D007086 8.8e-14 81.6 48 81.2
RcHm_v2.0_Chr5g0027621 Rosa chinensis HOM05D005390 ORTHO05D007086 2.0e-13 80.5 65 60.0
CARHR277060 Cardamine hirsuta HOM05D005390 ORTHO05D007086 4.8e-12 75.9 49 69.4
CAN.G755.13 Capsicum annuum HOM05D005390 ORTHO05D007086 1.1e-11 74.7 87 47.1
A06p18430 Brassica napus HOM05D005390 ORTHO05D028071 6.5e-09 65.5 44 65.9
A09p53940 Brassica napus HOM05D005390 ORTHO05D028071 2.5e-08 63.5 44 63.6
BraA09t40810Z Brassica rapa HOM05D005390 ORTHO05D028071 2.5e-08 63.5 44 63.6


User provided reference genes

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