Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g15248 Nelumbo nucifera HOM05D005489 ORTHO05D006629 1.2e-61 239.6 117 100.0
Nn1g08538 Nelumbo nucifera HOM05D005489 ORTHO05D006629 2.2e-34 149.1 107 70.1
Nn5g27958 Nelumbo nucifera HOM05D005489 ORTHO05D006629 1.0e-31 140.2 107 66.4
RcHm_v2.0_Chr7g0240921 Rosa chinensis HOM05D005489 ORTHO05D006629 1.0e-31 140.2 73 86.3
Aqoxy5G02479 Aquilegia oxysepala HOM05D005489 ORTHO05D006629 1.3e-31 139.8 73 84.9
Lsat_1_v5_gn_4_135561 Lactuca sativa HOM05D005489 ORTHO05D006629 1.3e-31 139.8 73 84.9
Dinv26716 Davidia involucrata HOM05D005489 ORTHO05D006629 2.3e-31 139.0 73 84.9
Gorai.002G220400 Gossypium raimondii HOM05D005489 ORTHO05D006629 2.9e-31 138.7 73 82.2
Gohir.A01G187700 Gossypium hirsutum HOM05D005489 ORTHO05D006629 3.8e-31 138.3 73 82.2
MBI06_g01046_MAGBIO Magnolia biondii HOM05D005489 ORTHO05D006629 3.8e-31 138.3 73 83.6
Cfa015959 Carpinus fangiana HOM05D005489 ORTHO05D006629 5.0e-31 137.9 82 78.0
COL.COLO4_32811 Corchorus olitorius HOM05D005489 ORTHO05D006629 5.0e-31 137.9 73 83.6
Haze_00523 Corylus avellana HOM05D005489 ORTHO05D006629 5.0e-31 137.9 90 73.3
Duzib041G0073 Durio zibethinus HOM05D005489 ORTHO05D006629 5.0e-31 137.9 73 83.6
HanXRQChr11g0326271 Helianthus annuus HOM05D005489 ORTHO05D006629 5.0e-31 137.9 73 83.6
Ciclev10002818m.g Citrus clementina HOM05D005489 ORTHO05D006629 6.6e-31 137.5 73 83.6
Hma1.2p1_0221F.1_g093180 Hydrangea macrophylla HOM05D005489 ORTHO05D006629 6.6e-31 137.5 73 83.6
Thecc.08G116800 Theobroma cacao HOM05D005489 ORTHO05D006629 6.6e-31 137.5 73 82.2
HanXRQChr09g0260151 Helianthus annuus HOM05D005489 ORTHO05D006629 8.6e-31 137.1 73 83.6
MD15G1359200 Malus domestica HOM05D005489 ORTHO05D006629 8.6e-31 137.1 73 83.6
Gohir.A06G041000 Gossypium hirsutum HOM05D005489 ORTHO05D006629 1.1e-30 136.7 73 82.2
Gohir.D06G041900 Gossypium hirsutum HOM05D005489 ORTHO05D006629 1.1e-30 136.7 73 82.2
Gorai.010G047100 Gossypium raimondii HOM05D005489 ORTHO05D006629 1.1e-30 136.7 73 82.2
Manes.18G073000 Manihot esculenta HOM05D005489 ORTHO05D006629 1.5e-30 136.3 73 82.2
Prupe.1G506000 Prunus persica HOM05D005489 ORTHO05D006629 1.5e-30 136.3 73 83.6
PGR044G1289 Punica granatum HOM05D005489 ORTHO05D006629 1.5e-30 136.3 73 80.8
DCAR_023128 Daucus carota HOM05D005489 ORTHO05D006629 1.9e-30 136.0 74 79.7
PSO017G5790 Papaver somniferum HOM05D005489 ORTHO05D006629 1.9e-30 136.0 73 82.2
PSO170G3859 Papaver somniferum HOM05D005489 ORTHO05D006629 1.9e-30 136.0 73 82.2
TAR197G0004 Trochodendron aralioides HOM05D005489 ORTHO05D006629 1.9e-30 136.0 73 82.2
Atru.chr13.1318 Acer truncatum HOM05D005489 ORTHO05D006629 2.5e-30 135.6 73 79.5
Atru.chr13.1362 Acer truncatum HOM05D005489 ORTHO05D006629 2.5e-30 135.6 73 79.5
FvH4_5g38950 Fragaria vesca HOM05D005489 ORTHO05D006629 2.5e-30 135.6 73 83.6
FAN04G1587 Fragaria x ananassa HOM05D005489 ORTHO05D006629 2.5e-30 135.6 73 83.6
FAN08G2064 Fragaria x ananassa HOM05D005489 ORTHO05D006629 2.5e-30 135.6 73 83.6
FAN13G3020 Fragaria x ananassa HOM05D005489 ORTHO05D006629 2.5e-30 135.6 73 83.6
FAN18G3455 Fragaria x ananassa HOM05D005489 ORTHO05D006629 2.5e-30 135.6 73 83.6
Sc01g0001550 Simmondsia chinensis HOM05D005489 ORTHO05D006629 2.5e-30 135.6 73 79.5
TAR628G1556 Trochodendron aralioides HOM05D005489 ORTHO05D006629 2.5e-30 135.6 73 80.8
ATR0121G008 Amborella trichopoda HOM05D005489 ORTHO05D006629 3.3e-30 135.2 73 83.6
CANSAT25G2554 Cannabis sativa HOM05D005489 ORTHO05D006629 3.3e-30 135.2 79 74.7
CDE06G1809 Ceratophyllum demersum HOM05D005489 ORTHO05D006629 3.3e-30 135.2 107 61.7
Gohir.D02G082100 Gossypium hirsutum HOM05D005489 ORTHO05D006629 3.3e-30 135.2 73 79.5
SGA_v2.0_scaffold24G10504 Striga asiatica HOM05D005489 ORTHO05D006629 3.3e-30 135.2 73 83.6
Dinv27383 Davidia involucrata HOM05D005489 ORTHO05D006629 4.3e-30 134.8 73 83.6
Gohir.A02G075000 Gossypium hirsutum HOM05D005489 ORTHO05D006629 4.3e-30 134.8 73 78.1
CiPaw.05G228700 Carya illinoinensis HOM05D005489 ORTHO05D006629 5.6e-30 134.4 73 80.8
PGSC0003DMG400027793 Solanum tuberosum HOM05D005489 ORTHO05D006629 5.6e-30 134.4 73 79.5
AL1G51120 Arabidopsis lyrata HOM05D005489 ORTHO05D006629 9.5e-30 133.7 73 79.5
AT1G36980 Arabidopsis thaliana HOM05D005489 ORTHO05D006629 9.5e-30 133.7 73 79.5
ClCG03G009110 Citrullus lanatus HOM05D005489 ORTHO05D006629 9.5e-30 133.7 73 80.8
MELO3C022783.2 Cucumis melo HOM05D005489 ORTHO05D006629 9.5e-30 133.7 73 80.8
CsaV3_5G023520 Cucumis sativus L. HOM05D005489 ORTHO05D006629 9.5e-30 133.7 73 80.8
QL12p035283 Quercus lobata HOM05D005489 ORTHO05D006629 9.5e-30 133.7 73 80.8
Sopen11g008580 Solanum pennellii HOM05D005489 ORTHO05D006629 9.5e-30 133.7 73 78.1
SGA_v2.0_scaffold118G32436 Striga asiatica HOM05D005489 ORTHO05D006629 9.5e-30 133.7 73 82.2
TAR127G0005 Trochodendron aralioides HOM05D005489 ORTHO05D006629 9.5e-30 133.7 73 80.8
GSVIVG01008943001 Vitis vinifera HOM05D005489 ORTHO05D006629 9.5e-30 133.7 73 80.8
Rhsim06G0109100 Rhododendron simsii HOM05D005489 ORTHO05D006629 1.2e-29 133.3 73 80.8
DCAR_014792 Daucus carota HOM05D005489 ORTHO05D006629 1.6e-29 132.9 73 78.1
Nitab4.5_0000051g0120 Nicotiana tabacum HOM05D005489 ORTHO05D006629 1.6e-29 132.9 73 79.5
Nitab4.5_0002332g0020 Nicotiana tabacum HOM05D005489 ORTHO05D006629 1.6e-29 132.9 73 79.5
THA.LOC104806808 Tarenaya hassleriana HOM05D005489 ORTHO05D006629 1.6e-29 132.9 73 82.2
TWI56G0906 Tripterygium wilfordii HOM05D005489 ORTHO05D006629 1.6e-29 132.9 73 78.1
BcaB03g13640 Brassica carinata HOM05D005489 ORTHO05D006629 2.1e-29 132.5 73 78.1
BcaC05g27681 Brassica carinata HOM05D005489 ORTHO05D006629 2.1e-29 132.5 73 78.1
BcaC05g27682 Brassica carinata HOM05D005489 ORTHO05D006629 2.1e-29 132.5 73 78.1
A05p23180 Brassica napus HOM05D005489 ORTHO05D006629 2.1e-29 132.5 73 78.1
C05p36630 Brassica napus HOM05D005489 ORTHO05D006629 2.1e-29 132.5 73 78.1
C05p36640 Brassica napus HOM05D005489 ORTHO05D006629 2.1e-29 132.5 73 78.1
BraA05t21185Z Brassica rapa HOM05D005489 ORTHO05D006629 2.1e-29 132.5 73 78.1
Solyc11g013550.2 Solanum lycopersicum HOM05D005489 ORTHO05D006629 2.1e-29 132.5 73 76.7
Aa31LG6G9070 Aethionema arabicum HOM05D005489 ORTHO05D006629 2.8e-29 132.1 73 78.1
CARHR034780 Cardamine hirsuta HOM05D005489 ORTHO05D006629 2.8e-29 132.1 73 76.7
Migut.C01190 Erythranthe guttata HOM05D005489 ORTHO05D006629 2.8e-29 132.1 73 79.5
Carub.0001s3388 Capsella rubella HOM05D005489 ORTHO05D006629 4.7e-29 131.3 73 78.1
Sed0015736 Sechium edule HOM05D005489 ORTHO05D006629 4.7e-29 131.3 73 78.1
Hund16821 Selenicereus undatus HOM05D005489 ORTHO05D006629 4.7e-29 131.3 73 79.5
Thhalv10005115m.g Eutrema salsugineum HOM05D005489 ORTHO05D006629 6.1e-29 131.0 73 76.7
Sp1g31180 Schrenkiella parvula HOM05D005489 ORTHO05D006629 6.1e-29 131.0 73 76.7
Duzib093G1687 Durio zibethinus HOM05D005489 ORTHO05D006629 8.0e-29 130.6 73 79.5
Potri.005G171901 Populus trichocarpa HOM05D005489 ORTHO05D006629 8.0e-29 130.6 73 78.1
THA.LOC104813132 Tarenaya hassleriana HOM05D005489 ORTHO05D006629 8.0e-29 130.6 73 78.1
Gohir.D01G181900 Gossypium hirsutum HOM05D005489 ORTHO05D006629 1.0e-28 130.2 73 79.5
Sabra02G0070300 Salix brachista HOM05D005489 ORTHO05D006629 1.4e-28 129.8 73 78.1
EL10Ac1g00039 Beta vulgaris HOM05D005489 ORTHO05D006629 1.8e-28 129.4 73 79.5
CAN.G255.20 Capsicum annuum HOM05D005489 ORTHO05D006629 1.8e-28 129.4 73 74.0
TWI12G0464 Tripterygium wilfordii HOM05D005489 ORTHO05D006629 1.8e-28 129.4 73 75.3
MSTRG.1486 Avicennia marina HOM05D005489 ORTHO05D006629 3.0e-28 128.6 73 76.7
Oeu032962.1 Olea europaea HOM05D005489 ORTHO05D006629 3.0e-28 128.6 92 68.5
Oeu043793.1 Olea europaea HOM05D005489 ORTHO05D006629 3.0e-28 128.6 99 63.6
Peaxi162Scf01011g00023 Petunia axillaris HOM05D005489 ORTHO05D006629 3.0e-28 128.6 73 78.1
SalBow1G3581 Salvia bowleyana HOM05D005489 ORTHO05D006629 3.0e-28 128.6 73 79.5
ECA232G0625 Erigeron canadensis HOM05D005489 ORTHO05D006629 4.0e-28 128.3 69 84.1
Potri.002G089300 Populus trichocarpa HOM05D005489 ORTHO05D006629 4.0e-28 128.3 73 76.7
arahy.Tifrunner.gnm1.ann1.204R5H Arachis hypogaea HOM05D005489 ORTHO05D006629 8.9e-28 127.1 73 76.7
arahy.Tifrunner.gnm1.ann1.64ZY3M Arachis hypogaea HOM05D005489 ORTHO05D006629 8.9e-28 127.1 73 76.7
Glyma.04G253700 Glycine max HOM05D005489 ORTHO05D006629 8.9e-28 127.1 73 76.7
Lj1g0000272 Lotus japonicus HOM05D005489 ORTHO05D006629 1.2e-27 126.7 73 76.7
BolC5t32398H Brassica oleracea HOM05D005489 ORTHO05D006629 2.0e-27 125.9 79 72.2
Ca_25761_v3 Cicer arietinum L. HOM05D005489 ORTHO05D006629 2.0e-27 125.9 73 76.7
Medtr3g073300 Medicago truncatula HOM05D005489 ORTHO05D006629 2.0e-27 125.9 73 76.7
Psat5g135600 Pisum sativum HOM05D005489 ORTHO05D006629 2.0e-27 125.9 73 76.7
TPR.G32948 Trifolium pratense HOM05D005489 ORTHO05D006629 2.0e-27 125.9 73 76.7
VMungo1127G1458 Vigna mungo HOM05D005489 ORTHO05D006629 3.4e-27 125.2 73 74.0
Cc10_g10440 Coffea canephora HOM05D005489 ORTHO05D006629 5.8e-27 124.4 73 79.5
Glyma.06G108600 Glycine max HOM05D005489 ORTHO05D006629 5.8e-27 124.4 73 75.3
Phvul.011G165300 Phaseolus vulgaris HOM05D005489 ORTHO05D006629 9.8e-27 123.6 73 72.6
Lalb_Chr11g0065701 Lupinus albus HOM05D005489 ORTHO05D006629 2.9e-26 122.1 73 72.6
Lalb_Chr08g0241711 Lupinus albus HOM05D005489 ORTHO05D006629 3.7e-26 121.7 73 72.6
Migut.N03320 Erythranthe guttata HOM05D005489 ORTHO05D006629 1.1e-25 120.2 73 76.7
unitig_747.g21477 Utricularia gibba HOM05D003597 ORTHO05D004420 1.1e-25 120.2 87 60.9
Oeu050268.1 Olea europaea HOM05D005489 ORTHO05D006629 1.9e-25 119.4 83 68.7
Actinidia29431 Actinidia chinensis HOM05D005489 ORTHO05D006629 6.0e-24 114.4 72 69.4
HPP92_002297 Vanilla planifolia HOM05D005489 ORTHO05D006629 1.7e-23 112.8 105 55.2
SEGI_34511 Sequoiadendron giganteum HOM05D005489 ORTHO05D006629 1.1e-22 110.2 71 69.0
AagrBONN_evm.TU.Sc2ySwM_344.2049 Anthoceros agrestis HOM05D005489 ORTHO05D006629 1.6e-21 106.3 67 70.1
HPP92_005944 Vanilla planifolia HOM05D005489 ORTHO05D006629 3.6e-21 105.1 71 64.8
Zm00001eb100550 Zea mays HOM05D005489 ORTHO05D006629 6.2e-21 104.4 76 63.2
Os02g0566900 Oryza sativa ssp. japonica HOM05D005489 ORTHO05D006629 1.1e-20 103.6 71 63.4
Os09g0453000 Oryza sativa ssp. japonica HOM05D005489 ORTHO05D006629 1.1e-20 103.6 76 65.8
Zm00001eb244520 Zea mays HOM05D005489 ORTHO05D006629 4.0e-20 101.7 70 64.3
Pp3c1_10200 Physcomitrium patens HOM05D005489 ORTHO05D006629 2.0e-19 99.4 73 58.9
Pp3c2_28270 Physcomitrium patens HOM05D005489 ORTHO05D006629 3.4e-19 98.6 73 60.3
SMO116G0262 Selaginella moellendorffii HOM05D005489 ORTHO05D006629 4.4e-19 98.2 67 64.2
CBR_g30829 Chara braunii HOM05D005489 ORTHO05D006629 5.8e-19 97.8 66 63.6
Mapoly0004s0020 Marchantia polymorpha HOM05D005489 ORTHO05D006629 1.9e-17 92.8 90 50.0
Eucgr.F04378 Eucalyptus grandis HOM05D005489 ORTHO05D006629 4.6e-16 88.2 45 88.9
Cre01.g042950 Chlamydomonas reinhardtii HOM05D005489 ORTHO05D006629 6.8e-12 74.3 71 43.7
Sabra05G0129400 Salix brachista HOM05D005489 ORTHO05D006629 1.4e-09 66.6 73 49.3
SalBow7G1125 Salvia bowleyana HOM05D002998 ORTHO05D006629 6.0e-08 61.2 35 77.1
SalBow7G4082 Salvia bowleyana HOM05D005489 ORTHO05D006629 6.0e-08 61.2 35 77.1
Gorai.005G092000 Gossypium raimondii HOM05D005489 ORTHO05D006629 1.9e-06 56.2 29 72.4
AUR62004694 Chenopodium quinoa HOM05D005489 ORTHO05D006629 2.5e-06 55.8 29 75.9


User provided reference genes

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