Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g15201 Nelumbo nucifera HOM05D004238 ORTHO05D004934 1.1e-144 516.5 257 100.0
Nn4g23948 Nelumbo nucifera HOM05D004238 ORTHO05D004934 8.6e-100 367.5 201 93.5
TAR535G0010 Trochodendron aralioides HOM05D004238 ORTHO05D004934 3.4e-88 328.9 202 83.7
TAR371G0763 Trochodendron aralioides HOM05D004238 ORTHO05D004934 1.3e-87 327.0 202 83.7
TAR426G0005 Trochodendron aralioides HOM05D004238 ORTHO05D004934 1.3e-87 327.0 202 83.7
Aqoxy3G00204 Aquilegia oxysepala HOM05D004238 ORTHO05D004934 3.5e-85 318.9 202 79.7
GSVIVG01008335001 Vitis vinifera HOM05D004238 ORTHO05D004934 5.0e-84 315.1 202 78.7
PSO017G2643 Papaver somniferum HOM05D004238 ORTHO05D004934 6.6e-84 314.7 202 79.2
CSS0035838 Camellia sinensis var. sinensis HOM05D004238 ORTHO05D004934 1.9e-83 313.2 202 78.7
CSS0018341 Camellia sinensis var. sinensis HOM05D004238 ORTHO05D004934 2.5e-83 312.8 202 78.7
PSO478G0260 Papaver somniferum HOM05D004238 ORTHO05D004934 5.6e-83 311.6 202 78.2
PGSC0003DMG400005732 Solanum tuberosum HOM05D004238 ORTHO05D004934 8.1e-82 307.8 202 77.7
Dinv28139 Davidia involucrata HOM05D004238 ORTHO05D004934 1.4e-81 307.0 202 77.2
Solyc03g119200.4 Solanum lycopersicum HOM05D004238 ORTHO05D004934 1.8e-81 306.6 218 72.0
Nitab4.5_0001986g0030 Nicotiana tabacum HOM05D004238 ORTHO05D004934 3.1e-81 305.8 202 77.2
Rhsim08G0130500 Rhododendron simsii HOM05D004238 ORTHO05D004934 4.0e-81 305.4 213 75.6
Rhsim08G0130600 Rhododendron simsii HOM05D004238 ORTHO05D004934 4.0e-81 305.4 213 75.6
CiPaw.16G088800 Carya illinoinensis HOM05D004238 ORTHO05D004934 2.0e-80 303.1 202 76.2
HanXRQChr17g0559411 Helianthus annuus HOM05D004238 ORTHO05D004934 2.0e-80 303.1 202 76.2
DCAR_015154 Daucus carota HOM05D004238 ORTHO05D004934 2.6e-80 302.8 202 77.7
Duzib084G0471 Durio zibethinus HOM05D004238 ORTHO05D004934 4.4e-80 302.0 202 76.7
Phvul.002G182700 Phaseolus vulgaris HOM05D004238 ORTHO05D004934 4.4e-80 302.0 202 74.8
FvH4_5g16670 Fragaria vesca HOM05D004238 ORTHO05D004934 5.8e-80 301.6 202 76.2
FAN04G1535 Fragaria x ananassa HOM05D004238 ORTHO05D004934 5.8e-80 301.6 202 76.2
arahy.Tifrunner.gnm1.ann1.NC6GJT Arachis hypogaea HOM05D004238 ORTHO05D004934 7.5e-80 301.2 202 74.3
PGR083G1292 Punica granatum HOM05D004238 ORTHO05D004934 7.5e-80 301.2 202 76.7
TWI15G0256 Tripterygium wilfordii HOM05D004238 ORTHO05D004934 7.5e-80 301.2 202 75.2
VMungo0251G1679 Vigna mungo HOM05D004238 ORTHO05D004934 7.5e-80 301.2 202 74.3
RcHm_v2.0_Chr7g0179451 Rosa chinensis HOM05D004238 ORTHO05D004934 9.8e-80 300.8 202 75.7
FAN13G1096 Fragaria x ananassa HOM05D004238 ORTHO05D004934 1.3e-79 300.4 202 76.2
Lj9C425T3 Lonicera japonica HOM05D004238 ORTHO05D004934 1.3e-79 300.4 202 76.7
Psat7g083560 Pisum sativum HOM05D004238 ORTHO05D004934 1.3e-79 300.4 202 72.8
COL.COLO4_20838 Corchorus olitorius HOM05D004238 ORTHO05D004934 1.7e-79 300.1 202 76.7
MBI09_g25158_MAGBIO Magnolia biondii HOM05D004238 ORTHO05D004934 1.7e-79 300.1 202 76.7
Atru.chr9.900 Acer truncatum HOM05D004238 ORTHO05D004934 2.2e-79 299.7 202 75.7
Cpa.g.sc3.467 Carica papaya HOM05D004238 ORTHO05D004934 2.2e-79 299.7 202 75.7
Gohir.D07G071400 Gossypium hirsutum HOM05D004238 ORTHO05D004934 2.9e-79 299.3 202 75.2
FAN08G0774 Fragaria x ananassa HOM05D004238 ORTHO05D004934 3.7e-79 298.9 201 76.1
Glyma.05G139300 Glycine max HOM05D004238 ORTHO05D004934 3.7e-79 298.9 202 73.8
Gorai.001G075300 Gossypium raimondii HOM05D004238 ORTHO05D004934 3.7e-79 298.9 252 65.1
CAN.G1129.11 Capsicum annuum HOM05D004238 ORTHO05D004934 4.9e-79 298.5 202 75.2
FAN18G3483 Fragaria x ananassa HOM05D004238 ORTHO05D004934 4.9e-79 298.5 202 75.7
Hma1.2p1_1283F.1_g272760 Hydrangea macrophylla HOM05D004238 ORTHO05D004934 4.9e-79 298.5 202 75.7
CANSAT80G2380 Cannabis sativa HOM05D004238 ORTHO05D004934 6.4e-79 298.1 202 74.8
CiPaw.15G135000 Carya illinoinensis HOM05D004238 ORTHO05D004934 6.4e-79 298.1 202 74.3
Glyma.08G094600 Glycine max HOM05D004238 ORTHO05D004934 6.4e-79 298.1 202 73.8
arahy.Tifrunner.gnm1.ann1.KCMD1F Arachis hypogaea HOM05D004238 ORTHO05D004934 8.3e-79 297.7 202 73.8
Ca_11587_v3 Cicer arietinum L. HOM05D004238 ORTHO05D004934 1.4e-78 297.0 202 71.8
Lj4g0001453 Lotus japonicus HOM05D004238 ORTHO05D004934 1.4e-78 297.0 202 73.8
Nitab4.5_0004028g0040 Nicotiana tabacum HOM05D004238 ORTHO05D004934 1.4e-78 297.0 202 74.8
Lalb_Chr13g0293671 Lupinus albus HOM05D004238 ORTHO05D004934 2.4e-78 296.2 202 74.8
Prupe.5G224400 Prunus persica HOM05D004238 ORTHO05D004934 5.4e-78 295.0 202 74.8
MD06G1220000 Malus domestica HOM05D004238 ORTHO05D004934 7.1e-78 294.7 202 74.8
Peaxi162Scf00683g00158 Petunia axillaris HOM05D004238 ORTHO05D004934 7.1e-78 294.7 216 69.9
MD14G1229600 Malus domestica HOM05D004238 ORTHO05D004934 1.2e-77 293.9 202 74.8
Thecc.03G040700 Theobroma cacao HOM05D004238 ORTHO05D004934 1.2e-77 293.9 202 74.3
Sc04g0003400 Simmondsia chinensis HOM05D004238 ORTHO05D004934 7.8e-77 291.2 202 73.8
TPR.G5108 Trifolium pratense HOM05D004238 ORTHO05D004934 7.8e-77 291.2 202 70.3
ClCG06G014610 Citrullus lanatus HOM05D004238 ORTHO05D004934 1.0e-76 290.8 202 73.8
Haze_18725 Corylus avellana HOM05D004238 ORTHO05D004934 1.0e-76 290.8 217 70.5
Oeu000985.1 Olea europaea HOM05D004238 ORTHO05D004934 1.0e-76 290.8 201 73.6
Potri.012G054200 Populus trichocarpa HOM05D004238 ORTHO05D004934 1.3e-76 290.4 202 73.3
Eucgr.B00825 Eucalyptus grandis HOM05D004238 ORTHO05D004934 2.3e-76 289.7 202 73.3
Zm00001eb335570 Zea mays HOM05D004238 ORTHO05D004934 3.9e-76 288.9 203 73.4
Sabra12G0038000 Salix brachista HOM05D004238 ORTHO05D004934 8.6e-76 287.7 202 72.8
CsaV3_1G004010 Cucumis sativus L. HOM05D004238 ORTHO05D004934 1.1e-75 287.3 202 72.8
Migut.I00409 Erythranthe guttata HOM05D004238 ORTHO05D004934 1.1e-75 287.3 216 69.4
Lsat_1_v5_gn_8_143241 Lactuca sativa HOM05D004238 ORTHO05D004934 1.5e-75 287.0 211 70.1
Sed0011571 Sechium edule HOM05D004238 ORTHO05D004934 1.9e-75 286.6 202 72.3
Os01g0138900 Oryza sativa ssp. japonica HOM05D004238 ORTHO05D004934 3.3e-75 285.8 202 71.8
Hund02354 Selenicereus undatus HOM05D004238 ORTHO05D004934 4.3e-75 285.4 202 70.8
MELO3C017324.2 Cucumis melo HOM05D004238 ORTHO05D004934 1.6e-74 283.5 202 71.3
DCAR_011373 Daucus carota HOM05D004238 ORTHO05D004934 2.8e-74 282.7 205 71.2
HPP92_008849 Vanilla planifolia HOM05D004238 ORTHO05D004934 2.8e-74 282.7 202 70.3
Cc04_g06880 Coffea canephora HOM05D004238 ORTHO05D004934 3.6e-74 282.3 202 71.8
ATR0807G117 Amborella trichopoda HOM05D004238 ORTHO05D004934 6.2e-74 281.6 202 71.3
DCAR_011371 Daucus carota HOM05D004238 ORTHO05D004934 8.1e-74 281.2 202 71.3
DCAR_024088 Daucus carota HOM05D004238 ORTHO05D004934 1.4e-73 280.4 202 71.8
Dinv34796 Davidia involucrata HOM05D004238 ORTHO05D004934 1.8e-73 280.0 202 70.3
Duzib138G0550 Durio zibethinus HOM05D004238 ORTHO05D004934 3.1e-73 279.3 202 69.3
Zm00001eb124820 Zea mays HOM05D004238 ORTHO05D004934 8.9e-73 277.7 195 72.3
MSTRG.11313 Avicennia marina HOM05D004238 ORTHO05D004934 2.6e-72 276.2 212 67.5
Gohir.D11G171700 Gossypium hirsutum HOM05D004238 ORTHO05D004934 5.8e-72 275.0 202 67.3
COL.COLO4_09370 Corchorus olitorius HOM05D004238 ORTHO05D004934 9.9e-72 274.2 200 68.5
Carub.0003s1804 Capsella rubella HOM05D004238 ORTHO05D004934 1.3e-71 273.9 202 67.8
Atru.chr1.1618 Acer truncatum HOM05D004238 ORTHO05D004934 1.7e-71 273.5 202 67.8
THA.LOC104820382 Tarenaya hassleriana HOM05D004238 ORTHO05D004934 2.9e-71 272.7 202 69.3
A05p31380 Brassica napus HOM05D004238 ORTHO05D004934 3.8e-71 272.3 202 67.3
AT3G18270 Arabidopsis thaliana HOM05D004238 ORTHO05D004934 8.4e-71 271.2 202 66.3
BraA05t21977Z Brassica rapa HOM05D004238 ORTHO05D004934 8.4e-71 271.2 202 66.8
CDE08G0051 Ceratophyllum demersum HOM05D004238 ORTHO05D004934 1.9e-70 270.0 201 67.2
Ciclev10011789m.g Citrus clementina HOM05D004238 ORTHO05D004934 2.4e-70 269.6 202 67.8
AL3G31500 Arabidopsis lyrata HOM05D004238 ORTHO05D004934 4.1e-70 268.9 202 66.3
Thhalv10022164m.g Eutrema salsugineum HOM05D004238 ORTHO05D004934 7.1e-70 268.1 202 66.8
Thecc.04G129000 Theobroma cacao HOM05D004238 ORTHO05D004934 7.1e-70 268.1 202 67.8
BolC5t33477H Brassica oleracea HOM05D004238 ORTHO05D004934 1.2e-69 267.3 202 66.3
Gohir.A11G165600 Gossypium hirsutum HOM05D004238 ORTHO05D004934 4.6e-69 265.4 202 65.8
C05p47680 Brassica napus HOM05D004238 ORTHO05D004934 7.8e-69 264.6 202 65.3
Thhalv10020846m.g Eutrema salsugineum HOM05D004238 ORTHO05D004934 7.8e-69 264.6 202 65.8
Aa31LG8G5120 Aethionema arabicum HOM05D004238 ORTHO05D004934 8.6e-68 261.2 202 64.4
CANSAT78G0772 Cannabis sativa HOM05D004238 ORTHO05D004934 1.2e-66 257.3 202 61.9
Manes.02G071200 Manihot esculenta HOM05D004238 ORTHO05D004934 4.7e-66 255.4 199 63.8
ClCG11G007750 Citrullus lanatus HOM05D004238 ORTHO05D004934 1.8e-65 253.4 211 59.7
CsaV3_2G033830 Cucumis sativus L. HOM05D004238 ORTHO05D004934 1.8e-65 253.4 200 63.0
Cpa.g.sc170.33 Carica papaya HOM05D004238 ORTHO05D004934 8.9e-65 251.1 206 60.7
DCAR_011367 Daucus carota HOM05D004238 ORTHO05D004934 9.9e-64 247.7 202 63.4
Gohir.A07G066800 Gossypium hirsutum HOM05D004238 ORTHO05D004934 1.7e-63 246.9 160 76.2
Manes.01G014900 Manihot esculenta HOM05D004238 ORTHO05D004934 1.7e-60 236.9 165 72.1
Sp3g16390 Schrenkiella parvula HOM05D004238 ORTHO05D004934 1.9e-59 233.4 202 60.9
Mapoly0058s0107 Marchantia polymorpha HOM05D004238 ORTHO05D004934 3.1e-57 226.1 203 57.1
DCAR_011370 Daucus carota HOM05D004238 ORTHO05D004934 5.3e-57 225.3 164 70.1
Dinv12220 Davidia involucrata HOM05D004238 ORTHO05D004934 1.2e-56 224.2 202 61.9
SMO146G0383 Selaginella moellendorffii HOM05D004238 ORTHO05D004934 1.2e-56 224.2 217 53.9
DCAR_000177 Daucus carota HOM05D004238 ORTHO05D004934 9.9e-56 221.1 162 69.8
DCAR_011366 Daucus carota HOM05D004238 ORTHO05D004934 8.4e-55 218.0 164 67.7
CARHR093620 Cardamine hirsuta HOM05D004238 ORTHO05D004934 1.6e-53 213.8 164 65.9
Pp3c2_34370 Physcomitrium patens HOM05D004238 ORTHO05D004934 4.6e-53 212.2 203 54.2
HPP92_008863 Vanilla planifolia HOM05D004238 ORTHO05D004934 2.5e-51 206.5 201 57.2
DCAR_011376 Daucus carota HOM05D004238 ORTHO05D004934 3.3e-51 206.1 179 58.7
SMO146G0146 Selaginella moellendorffii HOM05D004238 ORTHO05D004934 1.2e-45 187.6 207 50.2
Eucgr.B00826 Eucalyptus grandis HOM05D004238 ORTHO05D004934 7.9e-45 184.9 164 61.0
ECA233G1745 Erigeron canadensis HOM05D004238 ORTHO05D004934 1.5e-43 180.6 109 81.7
Potri.015G044400 Populus trichocarpa HOM05D004238 ORTHO05D004934 1.2e-40 171.0 202 51.0
PRCOL_00000826 Prasinoderma coloniale HOM05D004238 ORTHO05D004934 1.9e-35 153.7 214 41.6
Nn4g22334 Nelumbo nucifera HOM05D004238 ORTHO05D004934 1.9e-30 137.1 88 83.0
DCAR_000092 Daucus carota HOM05D004238 ORTHO05D004934 5.3e-25 119.0 87 69.0
Atru.chr12.656 Acer truncatum HOM05D004238 ORTHO05D004934 9.1e-25 118.2 91 61.5
Atru.chr12.683 Acer truncatum HOM05D004238 ORTHO05D004934 1.5e-24 117.5 91 59.3
Sabra15G0040700 Salix brachista HOM05D004238 ORTHO05D004934 1.8e-20 104.0 138 45.7
Zm00001eb084840 Zea mays HOM05D004238 ORTHO05D004934 1.5e-16 90.9 74 66.2
Pp3s30_70 Physcomitrium patens HOM05D004238 ORTHO05D004934 1.3e-15 87.8 209 31.6
Pp3s30_460 Physcomitrium patens HOM05D019034 ORTHO05D004934 2.2e-15 87.0 217 29.5
Dinv00811 Davidia involucrata HOM05D004238 ORTHO05D004934 1.2e-13 81.3 150 38.0
VMungo1127G1492 Vigna mungo HOM05D000769 ORTHO05D000598 1.8e-12 77.4 71 57.7
Psat5g132800 Pisum sativum HOM05D004238 ORTHO05D004934 2.0e-11 73.9 43 83.7
TAR371G0419 Trochodendron aralioides HOM05D004238 ORTHO05D004934 7.4e-11 72.0 43 79.1
Atru.chr12.682 Acer truncatum HOM05D004238 ORTHO05D004934 3.1e-09 66.6 52 65.4
Psat0s1333g0160 Pisum sativum HOM05D004238 ORTHO05D004934 3.1e-09 66.6 43 79.1
Psat0s2250g0040 Pisum sativum HOM05D005720 ORTHO05D006984 5.3e-09 65.9 84 48.8
MELO3C008155.2 Cucumis melo HOM05D004238 ORTHO05D004934 2.0e-08 63.9 65 52.3
Duzib205G0622 Durio zibethinus HOM05D004238 ORTHO05D004934 2.6e-08 63.5 46 69.6
Sed0014968 Sechium edule HOM05D004238 ORTHO05D004934 2.6e-08 63.5 56 60.7
Pp3c9_10620 Physcomitrium patens HOM05D003438 ORTHO05D004235 3.5e-08 63.2 233 29.2
BcaC08g44328 Brassica carinata HOM05D004238 ORTHO05D004934 7.7e-08 62.0 39 69.2
C06p17530 Brassica napus HOM05D004238 ORTHO05D004934 7.7e-08 62.0 39 69.2
TPR.G26740 Trifolium pratense HOM05D004238 ORTHO05D004934 7.7e-08 62.0 56 57.1
C05p38610 Brassica napus HOM05D004238 ORTHO05D004934 1.3e-07 61.2 39 71.8
CiPaw.05G119100 Carya illinoinensis HOM05D003438 ORTHO05D004235 2.9e-07 60.1 200 28.0
FvH4_4g28800 Fragaria vesca HOM05D003438 ORTHO05D004235 5.0e-07 59.3 211 29.4
unitig_699.g19901 Utricularia gibba HOM05D003438 ORTHO05D004235 6.5e-07 58.9 203 28.1
Mapoly0195s0004 Marchantia polymorpha HOM05D003438 ORTHO05D004235 1.9e-06 57.4 219 27.9
Dinv16582 Davidia involucrata HOM05D003438 ORTHO05D004235 2.5e-06 57.0 230 27.8
AagrBONN_evm.TU.Sc2ySwM_117.3507 Anthoceros agrestis HOM05D004238 ORTHO05D004934 3.2e-06 56.6 39 61.5
CARHR061750 Cardamine hirsuta HOM05D003438 ORTHO05D004235 3.2e-06 56.6 227 29.1
C02p25570 Brassica napus HOM05D003438 ORTHO05D004235 9.4e-06 55.1 227 27.3
BolC2t08622H Brassica oleracea HOM05D003438 ORTHO05D004235 9.4e-06 55.1 227 27.3


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