Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g15169 Nelumbo nucifera HOM05D000875 ORTHO05D000684 1.1e-60 236.5 123 100.0
Nn6g35235 Nelumbo nucifera HOM05D000875 ORTHO05D000684 8.7e-42 173.7 111 83.8
Nn2g13840 Nelumbo nucifera HOM05D000875 ORTHO05D000684 1.4e-31 139.8 119 66.4
TAR369G1022 Trochodendron aralioides HOM05D000875 ORTHO05D000684 6.7e-26 120.9 114 63.2
TAR623G0289 Trochodendron aralioides HOM05D000875 ORTHO05D000684 2.2e-24 115.9 105 56.2
QL01p015218 Quercus lobata HOM05D000875 ORTHO05D000684 1.4e-23 113.2 118 53.4
TWI79G0879 Tripterygium wilfordii HOM05D000875 ORTHO05D000684 4.1e-23 111.7 114 54.4
QL01p015125 Quercus lobata HOM05D000875 ORTHO05D000684 9.0e-23 110.5 118 52.5
Sabra09G0003100 Salix brachista HOM05D000875 ORTHO05D000684 1.2e-22 110.2 115 55.7
CiPaw.13G123100 Carya illinoinensis HOM05D000875 ORTHO05D000684 3.4e-22 108.6 114 54.4
Aqoxy2G01668 Aquilegia oxysepala HOM05D000875 ORTHO05D000684 1.3e-21 106.7 105 53.3
Potri.009G005800 Populus trichocarpa HOM05D000875 ORTHO05D000684 2.2e-21 105.9 105 55.2
Gohir.A03G029200 Gossypium hirsutum HOM05D000875 ORTHO05D000684 5.0e-21 104.8 118 54.2
Gorai.003G146100 Gossypium raimondii HOM05D000875 ORTHO05D000684 5.0e-21 104.8 118 54.2
Atru.chr3.3522 Acer truncatum HOM05D000875 ORTHO05D000684 1.4e-20 103.2 117 49.6
Gohir.D03G139400 Gossypium hirsutum HOM05D000875 ORTHO05D000684 2.5e-20 102.4 118 53.4
Dinv29377 Davidia involucrata HOM05D000875 ORTHO05D000684 3.2e-20 102.1 116 53.4
EL10Ac9g22614 Beta vulgaris HOM05D000875 ORTHO05D000684 7.2e-20 100.9 125 50.4
vmacro14394 Vaccinium macrocarpon HOM05D000875 ORTHO05D000684 1.6e-19 99.8 125 52.0
Thecc.09G350900 Theobroma cacao HOM05D000875 ORTHO05D000684 4.6e-19 98.2 112 52.7
Haze_23711 Corylus avellana HOM05D000875 ORTHO05D000684 6.1e-19 97.8 105 56.2
Sabra04G0147100 Salix brachista HOM05D000875 ORTHO05D000684 6.1e-19 97.8 110 51.8
Cfa010295 Carpinus fangiana HOM05D000875 ORTHO05D000684 1.0e-18 97.1 105 55.2
Nn3g19074 Nelumbo nucifera HOM05D000875 ORTHO05D000684 1.0e-18 97.1 56 85.7
Prupe.6G112400 Prunus persica HOM05D000875 ORTHO05D000684 1.0e-18 97.1 106 52.8
PGR119G1253 Punica granatum HOM05D000875 ORTHO05D000684 1.0e-18 97.1 115 53.0
CSS0044092 Camellia sinensis var. sinensis HOM05D000875 ORTHO05D000684 1.8e-18 96.3 115 51.3
CANSAT25G2534 Cannabis sativa HOM05D000875 ORTHO05D000684 1.8e-18 96.3 107 49.5
MD11G1147800 Malus domestica HOM05D000875 ORTHO05D000684 3.0e-18 95.5 115 53.0
Manes.11G152200 Manihot esculenta HOM05D000875 ORTHO05D000684 3.0e-18 95.5 113 48.7
Dinv16218 Davidia involucrata HOM05D000875 ORTHO05D000684 3.9e-18 95.1 123 49.6
Potri.004G216200 Populus trichocarpa HOM05D000875 ORTHO05D000684 5.1e-18 94.7 106 52.8
PGR119G1829 Punica granatum HOM05D000875 ORTHO05D000684 5.1e-18 94.7 115 50.4
Rhsim01G0211000 Rhododendron simsii HOM05D000875 ORTHO05D000684 5.1e-18 94.7 106 51.9
AUR62014960 Chenopodium quinoa HOM05D000875 ORTHO05D000684 6.7e-18 94.4 122 48.4
FAN21G1138 Fragaria x ananassa HOM05D000875 ORTHO05D000684 1.5e-17 93.2 114 50.0
CSS0045254 Camellia sinensis var. sinensis HOM05D000875 ORTHO05D000684 1.9e-17 92.8 124 47.6
Cpa.g.sc476.3 Carica papaya HOM05D000875 ORTHO05D000684 2.5e-17 92.4 113 49.6
Oeu008358.1 Olea europaea HOM05D000875 ORTHO05D000684 5.7e-17 91.3 115 50.4
Oeu008359.1 Olea europaea HOM05D000875 ORTHO05D000684 5.7e-17 91.3 115 50.4
TWI75G1353 Tripterygium wilfordii HOM05D000875 ORTHO05D000684 5.7e-17 91.3 114 46.5
Oeu000600.1 Olea europaea HOM05D000875 ORTHO05D000684 7.4e-17 90.9 115 47.0
MELO3C026950.2 Cucumis melo HOM05D000875 ORTHO05D000684 1.3e-16 90.1 114 50.0
AUR62029174 Chenopodium quinoa HOM05D000875 ORTHO05D000684 1.7e-16 89.7 122 45.9
MD00G1165800 Malus domestica HOM05D000875 ORTHO05D000684 1.7e-16 89.7 115 49.6
MD03G1127100 Malus domestica HOM05D000875 ORTHO05D000684 1.7e-16 89.7 115 49.6
Gohir.A08G201000 Gossypium hirsutum HOM05D000875 ORTHO05D000684 2.2e-16 89.4 114 50.9
Hund01426 Selenicereus undatus HOM05D000875 ORTHO05D000684 2.2e-16 89.4 105 46.7
Actinidia03693 Actinidia chinensis HOM05D000875 ORTHO05D000684 2.8e-16 89.0 115 47.8
Gorai.004G232000 Gossypium raimondii HOM05D000875 ORTHO05D000684 2.8e-16 89.0 114 50.9
MSTRG.17760 Avicennia marina HOM05D000875 ORTHO05D000684 4.8e-16 88.2 115 47.8
CsaV3_6G014330 Cucumis sativus L. HOM05D000875 ORTHO05D000684 4.8e-16 88.2 114 49.1
ClCG02G021560 Citrullus lanatus HOM05D000875 ORTHO05D000684 8.2e-16 87.4 123 47.2
Duzib170G1168 Durio zibethinus HOM05D000875 ORTHO05D000684 8.2e-16 87.4 118 46.6
FAN25G2615 Fragaria x ananassa HOM05D000875 ORTHO05D000684 8.2e-16 87.4 105 49.5
Peaxi162Scf00983g00415 Petunia axillaris HOM05D000875 ORTHO05D000684 8.2e-16 87.4 107 50.5
RcHm_v2.0_Chr5g0056921 Rosa chinensis HOM05D000875 ORTHO05D000684 8.2e-16 87.4 104 49.0
Ciclev10028190m.g Citrus clementina HOM05D000875 ORTHO05D000684 1.1e-15 87.0 113 45.1
FvH4_3g30680 Fragaria vesca HOM05D000875 ORTHO05D000684 1.1e-15 87.0 113 46.9
FAN11G1500 Fragaria x ananassa HOM05D000875 ORTHO05D000684 1.1e-15 87.0 106 49.1
Nitab4.5_0028110g0010 Nicotiana tabacum HOM05D000875 ORTHO05D000684 1.1e-15 87.0 110 50.0
Cc01_g10330 Coffea canephora HOM05D000875 ORTHO05D000684 1.4e-15 86.7 109 50.5
TWI31G0905 Tripterygium wilfordii HOM05D000875 ORTHO05D000684 1.4e-15 86.7 105 46.7
Aa31LG5G7990 Aethionema arabicum HOM05D000875 ORTHO05D000684 1.8e-15 86.3 124 46.8
MSTRG.18700 Avicennia marina HOM05D000875 ORTHO05D000684 1.8e-15 86.3 115 47.0
COL.COLO4_11103 Corchorus olitorius HOM05D000875 ORTHO05D000684 1.8e-15 86.3 112 50.0
Duzib150G0456 Durio zibethinus HOM05D000875 ORTHO05D000684 1.8e-15 86.3 119 49.6
Nitab4.5_0004414g0030 Nicotiana tabacum HOM05D000875 ORTHO05D000684 1.8e-15 86.3 108 50.0
Manes.04G013400 Manihot esculenta HOM05D000875 ORTHO05D000684 2.4e-15 85.9 105 49.5
FAN16G0875 Fragaria x ananassa HOM05D000875 ORTHO05D000684 4.1e-15 85.1 105 48.6
DCAR_015507 Daucus carota HOM05D000875 ORTHO05D000684 5.3e-15 84.7 123 45.5
Hma1.2p1_0051F.1_g029430 Hydrangea macrophylla HOM05D000875 ORTHO05D000684 6.9e-15 84.3 118 46.6
Sed0017622 Sechium edule HOM05D000875 ORTHO05D000684 1.5e-14 83.2 123 44.7
Oeu007311.1 Olea europaea HOM05D000875 ORTHO05D000684 2.0e-14 82.8 115 46.1
PSO339G6584 Papaver somniferum HOM05D000875 ORTHO05D000684 2.6e-14 82.4 121 48.8
Sc06g0010810 Simmondsia chinensis HOM05D000875 ORTHO05D000684 2.6e-14 82.4 122 43.4
CSS0010484 Camellia sinensis var. sinensis HOM05D000875 ORTHO05D000684 5.9e-14 81.3 91 54.9
PSO801G0239 Papaver somniferum HOM05D000875 ORTHO05D000684 5.9e-14 81.3 121 47.9
Lalb_Chr24g0394921 Lupinus albus HOM05D000875 ORTHO05D000684 7.7e-14 80.9 119 43.7
Phvul.005G069000 Phaseolus vulgaris HOM05D000875 ORTHO05D000684 1.0e-13 80.5 122 45.9
Lj1A211T42 Lonicera japonica HOM05D000875 ORTHO05D000684 1.7e-13 79.7 121 45.5
Eucgr.J00387 Eucalyptus grandis HOM05D000875 ORTHO05D000684 2.9e-13 79.0 105 44.8
Glyma.12G178300 Glycine max HOM05D000875 ORTHO05D000684 6.5e-13 77.8 123 43.1
Lj2A1008T36 Lonicera japonica HOM05D000875 ORTHO05D000684 8.5e-13 77.4 110 48.2
Lj2A1008T37 Lonicera japonica HOM05D000875 ORTHO05D000684 8.5e-13 77.4 110 48.2
Solyc11g066380.3 Solanum lycopersicum HOM05D000875 ORTHO05D000684 8.5e-13 77.4 104 48.1
Sopen11g026130 Solanum pennellii HOM05D000875 ORTHO05D000684 8.5e-13 77.4 104 48.1
PGSC0003DMG400000416 Solanum tuberosum HOM05D000875 ORTHO05D000684 8.5e-13 77.4 108 49.1
Nn1g02098 Nelumbo nucifera HOM05D000875 ORTHO05D000684 1.1e-12 77.0 117 46.2
THA.LOC104800576 Tarenaya hassleriana HOM05D000875 ORTHO05D000684 1.4e-12 76.6 114 45.6
Ca_19319_v3 Cicer arietinum L. HOM05D000875 ORTHO05D000684 2.5e-12 75.9 123 43.9
ECA233G0178 Erigeron canadensis HOM05D000875 ORTHO05D000684 3.2e-12 75.5 114 43.9
THA.LOC104816072 Tarenaya hassleriana HOM05D000875 ORTHO05D000684 4.2e-12 75.1 119 43.7
CAN.G546.48 Capsicum annuum HOM05D000875 ORTHO05D000684 5.5e-12 74.7 104 46.2
unitig_22.g6653 Utricularia gibba HOM05D000875 ORTHO05D000684 7.2e-12 74.3 113 42.5
Psat7g191240 Pisum sativum HOM05D000875 ORTHO05D000684 2.1e-11 72.8 122 41.0
TPR.G21027 Trifolium pratense HOM05D000875 ORTHO05D000684 2.1e-11 72.8 122 41.0
TPR.G28209 Trifolium pratense HOM05D000875 ORTHO05D000684 2.1e-11 72.8 122 41.8
arahy.Tifrunner.gnm1.ann1.KRI533 Arachis hypogaea HOM05D000875 ORTHO05D000684 2.7e-11 72.4 105 44.8
VMungo1127G1254 Vigna mungo HOM05D000875 ORTHO05D000684 3.6e-11 72.0 123 43.1
Phvul.005G130600 Phaseolus vulgaris HOM05D000875 ORTHO05D000684 4.7e-11 71.6 124 44.4
arahy.Tifrunner.gnm1.ann1.62L8X5 Arachis hypogaea HOM05D000875 ORTHO05D000684 6.1e-11 71.2 105 44.8
Glyma.11G193000 Glycine max HOM05D000875 ORTHO05D000684 7.9e-11 70.9 123 41.5
Lj3g0006705 Lotus japonicus HOM05D000875 ORTHO05D000684 7.9e-11 70.9 124 42.7
Migut.N02545 Erythranthe guttata HOM05D000875 ORTHO05D000684 1.4e-10 70.1 115 46.1
Ca_01708_v3 Cicer arietinum L. HOM05D000875 ORTHO05D000684 1.8e-10 69.7 124 40.3
Glyma.13G322200 Glycine max HOM05D000875 ORTHO05D000684 1.8e-10 69.7 123 42.3
HanXRQChr02g0055531 Helianthus annuus HOM05D000875 ORTHO05D000684 1.8e-10 69.7 114 45.6
Glyma.12G081000 Glycine max HOM05D000875 ORTHO05D000684 2.3e-10 69.3 123 42.3
Medtr4g057330 Medicago truncatula HOM05D000875 ORTHO05D000684 3.0e-10 68.9 123 43.1
Nn1g03758 Nelumbo nucifera HOM05D000875 ORTHO05D276634 3.9e-10 68.6 42 78.6
Lalb_Chr22g0350401 Lupinus albus HOM05D000875 ORTHO05D000684 5.1e-10 68.2 122 45.9
unitig_27.g25047 Utricularia gibba HOM05D000875 ORTHO05D000684 1.1e-09 67.0 113 42.5
Gohir.D08G218200 Gossypium hirsutum HOM05D000875 ORTHO05D000684 2.6e-09 65.9 85 51.8
Psat5g253440 Pisum sativum HOM05D000875 ORTHO05D000684 3.3e-09 65.5 123 41.5
unitig_699.g19187 Utricularia gibba HOM05D000875 ORTHO05D000684 3.3e-09 65.5 125 38.4
Lj3g0002642 Lotus japonicus HOM05D000875 ORTHO05D000684 5.7e-09 64.7 122 39.3
Lj3g0028131 Lotus japonicus HOM05D000875 ORTHO05D000684 5.7e-09 64.7 122 39.3
Medtr2g084275 Medicago truncatula HOM05D000875 ORTHO05D000684 5.7e-09 64.7 124 40.3
Lalb_Chr01g0004581 Lupinus albus HOM05D000875 ORTHO05D000684 7.4e-09 64.3 122 41.0
HanXRQChr13g0396271 Helianthus annuus HOM05D000875 ORTHO05D000684 9.7e-09 63.9 114 40.4
Lalb_Chr19g0136931 Lupinus albus HOM05D000875 ORTHO05D000684 6.3e-08 61.2 124 43.5
arahy.Tifrunner.gnm1.ann1.00K3B7 Arachis hypogaea HOM05D000875 ORTHO05D000684 8.2e-08 60.8 122 38.5
arahy.Tifrunner.gnm1.ann1.9K9ZRS Arachis hypogaea HOM05D000875 ORTHO05D000684 8.2e-08 60.8 122 38.5
Duzib168G0123 Durio zibethinus HOM05D000875 ORTHO05D000684 1.8e-07 59.7 72 52.8
Sp4g10960 Schrenkiella parvula HOM05D000875 ORTHO05D000684 3.1e-07 58.9 122 41.8
AL4G22000 Arabidopsis lyrata HOM05D000875 ORTHO05D000684 5.9e-06 54.7 122 41.0
Lsat_1_v5_gn_6_43200 Lactuca sativa HOM05D000875 ORTHO05D000684 5.9e-06 54.7 111 40.5


User provided reference genes

Program Settings