Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g15153 Nelumbo nucifera HOM05D001986 ORTHO05D002283 3.9e-54 214.5 109 100.0
Nn2g11423 Nelumbo nucifera HOM05D001986 ORTHO05D002283 9.1e-43 176.8 108 85.2
Nn2g13657 Nelumbo nucifera HOM05D001986 ORTHO05D002283 7.2e-24 114.0 111 58.6
Potri.001G250100 Populus trichocarpa HOM05D001986 ORTHO05D002283 1.2e-15 86.7 104 51.0
TAR633G0772 Trochodendron aralioides HOM05D001986 ORTHO05D002283 1.6e-15 86.3 107 57.0
Manes.02G120700 Manihot esculenta HOM05D001986 ORTHO05D002283 2.1e-15 85.9 104 50.0
TAR623G0550 Trochodendron aralioides HOM05D001986 ORTHO05D002283 2.1e-15 85.9 107 50.5
Manes.01G163200 Manihot esculenta HOM05D001986 ORTHO05D002283 4.7e-15 84.7 104 49.0
Sabra16G0152100 Salix brachista HOM05D001986 ORTHO05D002283 4.7e-15 84.7 105 49.5
Sabra09G0031700 Salix brachista HOM05D001986 ORTHO05D002283 8.0e-15 84.0 104 48.1
TAR623G0633 Trochodendron aralioides HOM05D001986 ORTHO05D002283 2.3e-14 82.4 107 48.6
TAR369G0464 Trochodendron aralioides HOM05D001986 ORTHO05D002283 6.8e-14 80.9 107 47.7
TAR369G0921 Trochodendron aralioides HOM05D001986 ORTHO05D002283 6.8e-14 80.9 107 47.7
QL01p037599 Quercus lobata HOM05D001986 ORTHO05D002283 1.5e-13 79.7 108 48.1
vmacro14587 Vaccinium macrocarpon HOM05D001986 ORTHO05D002283 2.0e-13 79.3 93 46.2
Aqoxy4G02635 Aquilegia oxysepala HOM05D001986 ORTHO05D002283 1.3e-12 76.6 112 49.1
Gohir.A03G050200 Gossypium hirsutum HOM05D001986 ORTHO05D002283 2.2e-12 75.9 104 46.2
Prupe.6G059600 Prunus persica HOM05D001986 ORTHO05D002283 2.2e-12 75.9 112 41.1
Cc01_g14040 Coffea canephora HOM05D001986 ORTHO05D002283 3.7e-12 75.1 107 48.6
Gorai.003G123600 Gossypium raimondii HOM05D001986 ORTHO05D002283 3.7e-12 75.1 104 46.2
Gohir.D03G117200 Gossypium hirsutum HOM05D001986 ORTHO05D002283 6.4e-12 74.3 104 45.2
TWI75G1654 Tripterygium wilfordii HOM05D001986 ORTHO05D002283 1.1e-11 73.6 105 43.8
MD03G1072800 Malus domestica HOM05D001986 ORTHO05D002283 1.9e-11 72.8 108 44.4
Gohir.D07G107300 Gossypium hirsutum HOM05D001986 ORTHO05D002283 2.4e-11 72.4 76 51.3
Hma1.2p1_0227F.1_g096400 Hydrangea macrophylla HOM05D001986 ORTHO05D002283 2.4e-11 72.4 109 46.8
MD11G1078900 Malus domestica HOM05D001986 ORTHO05D002283 2.4e-11 72.4 108 43.5
CSS0009497 Camellia sinensis var. sinensis HOM05D001986 ORTHO05D002283 3.2e-11 72.0 106 48.1
CSS0017469 Camellia sinensis var. sinensis HOM05D001986 ORTHO05D002283 3.2e-11 72.0 106 48.1
Ciclev10028157m.g Citrus clementina HOM05D001986 ORTHO05D002283 3.2e-11 72.0 106 45.3
Duzib150G0302 Durio zibethinus HOM05D001986 ORTHO05D002283 3.2e-11 72.0 104 44.2
DCAR_007385 Daucus carota HOM05D001986 ORTHO05D002283 4.1e-11 71.6 108 44.4
Rhsim01G0235800 Rhododendron simsii HOM05D001986 ORTHO05D002283 5.4e-11 71.2 93 44.1
Dinv14456 Davidia involucrata HOM05D001986 ORTHO05D002283 7.0e-11 70.9 92 44.6
Gorai.001G115400 Gossypium raimondii HOM05D001986 ORTHO05D002283 1.6e-10 69.7 76 50.0
Thecc.09G304300 Theobroma cacao HOM05D001986 ORTHO05D002283 1.6e-10 69.7 104 47.1
Dinv28626 Davidia involucrata HOM05D001986 ORTHO05D002283 2.0e-10 69.3 93 45.2
ClCG02G019650 Citrullus lanatus HOM05D001986 ORTHO05D002283 6.0e-10 67.8 104 44.2
COL.COLO4_19120 Corchorus olitorius HOM05D001986 ORTHO05D002283 5.0e-09 64.7 104 42.3
CiPaw.14G060200 Carya illinoinensis HOM05D001986 ORTHO05D002283 1.9e-08 62.8 83 44.6
HanXRQChr01g0011391 Helianthus annuus HOM05D001986 ORTHO05D002283 2.5e-08 62.4 86 45.3
Actinidia25154 Actinidia chinensis HOM05D001986 ORTHO05D002283 3.3e-08 62.0 94 43.6
Lsat_1_v5_gn_9_19520 Lactuca sativa HOM05D001986 ORTHO05D002283 3.3e-08 62.0 89 44.9
Cfa019769 Carpinus fangiana HOM05D001986 ORTHO05D002283 4.3e-08 61.6 83 45.8
Haze_24272 Corylus avellana HOM05D001986 ORTHO05D002283 4.3e-08 61.6 84 45.2
Lsat_1_v5_gn_8_71080 Lactuca sativa HOM05D001986 ORTHO05D002283 4.3e-08 61.6 107 42.1
CAN.G394.116 Capsicum annuum HOM05D001986 ORTHO05D002283 5.6e-08 61.2 53 60.4
DCAR_025675 Daucus carota HOM05D001986 ORTHO05D002283 7.3e-08 60.8 108 39.8
Duzib170G0547 Durio zibethinus HOM05D001986 ORTHO05D002283 7.3e-08 60.8 104 39.4
FvH4_3g38330 Fragaria vesca HOM05D001986 ORTHO05D002283 7.3e-08 60.8 102 43.1
Gohir.A07G103500 Gossypium hirsutum HOM05D001986 ORTHO05D002283 9.5e-08 60.5 76 44.7
Potri.009G044200 Populus trichocarpa HOM05D001986 ORTHO05D002283 1.2e-07 60.1 104 39.4
THA.LOC104800724 Tarenaya hassleriana HOM05D001986 ORTHO05D002283 1.2e-07 60.1 103 40.8
Peaxi162Scf00540g00623 Petunia axillaris HOM05D001986 ORTHO05D002283 1.6e-07 59.7 102 44.1
MELO3C025863.2 Cucumis melo HOM05D001986 ORTHO05D002283 2.1e-07 59.3 105 43.8
Duzib168G1084 Durio zibethinus HOM05D001986 ORTHO05D002283 2.1e-07 59.3 102 41.2
Sed0017568 Sechium edule HOM05D001986 ORTHO05D002283 4.7e-07 58.2 104 38.5
Solyc06g076850.3 Solanum lycopersicum HOM05D001986 ORTHO05D002283 4.7e-07 58.2 47 61.7
Sopen06g033240 Solanum pennellii HOM05D001986 ORTHO05D002283 4.7e-07 58.2 47 61.7
Lj6g0026845 Lotus japonicus HOM05D001986 ORTHO05D002283 6.2e-07 57.8 86 46.5
PSO384G1838 Papaver somniferum HOM05D001986 ORTHO05D002283 8.0e-07 57.4 110 40.0
PSO339G3837 Papaver somniferum HOM05D001986 ORTHO05D002283 1.1e-06 57.0 110 41.8
ClCG03G000830 Citrullus lanatus HOM05D001986 ORTHO05D002283 1.4e-06 56.6 107 38.3
Lsat_1_v5_gn_5_171460 Lactuca sativa HOM05D001986 ORTHO05D002283 1.8e-06 56.2 107 40.2
VMungo0540G1538 Vigna mungo HOM05D001986 ORTHO05D002283 4.0e-06 55.1 89 42.7
CsaV3_6G016330 Cucumis sativus L. HOM05D001986 ORTHO05D002283 5.2e-06 54.7 105 41.9
Sed0010611 Sechium edule HOM05D001986 ORTHO05D002283 5.2e-06 54.7 77 46.8


User provided reference genes

Program Settings