Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g15118 Nelumbo nucifera HOM05D007041 ORTHO05D008036 1.6e-57 226.1 130 100.0
Nn1g01816 Nelumbo nucifera HOM05D007041 ORTHO05D008036 2.3e-37 159.1 124 81.5
TAR629G2489 Trochodendron aralioides HOM05D007041 ORTHO05D008036 4.8e-14 81.6 124 46.0
TAR636G2915 Trochodendron aralioides HOM05D007041 ORTHO05D008036 7.1e-10 67.8 130 39.2
COL.COLO4_06320 Corchorus olitorius HOM05D007041 ORTHO05D008036 4.6e-09 65.1 103 42.7
Thecc.01G346300 Theobroma cacao HOM05D007041 ORTHO05D008036 1.0e-08 63.9 99 40.4
Nn3g19073 Nelumbo nucifera HOM05D007041 ORTHO05D008036 2.3e-08 62.8 87 50.6
RcHm_v2.0_Chr1g0358991 Rosa chinensis HOM05D007041 ORTHO05D008036 2.3e-08 62.8 102 41.2
CiPaw.01G073300 Carya illinoinensis HOM05D007041 ORTHO05D008036 3.9e-08 62.0 82 50.0
QL02p031389 Quercus lobata HOM05D007041 ORTHO05D008036 6.6e-08 61.2 101 40.6
SalBow3G2736 Salvia bowleyana HOM05D007041 ORTHO05D008036 8.7e-08 60.8 96 35.4
EL10Ac1g00306 Beta vulgaris HOM05D007041 ORTHO05D008036 3.3e-07 58.9 36 72.2
FvH4_7g16050 Fragaria vesca HOM05D007041 ORTHO05D008036 7.3e-07 57.8 63 49.2
FAN10G1361 Fragaria x ananassa HOM05D007041 ORTHO05D008036 7.3e-07 57.8 63 49.2
Glyma.07G057800 Glycine max HOM05D007041 ORTHO05D008036 7.3e-07 57.8 133 31.6
Nitab4.5_0007594g0010 Nicotiana tabacum HOM05D007041 ORTHO05D008036 9.6e-07 57.4 43 62.8
FAN03G1744 Fragaria x ananassa HOM05D007041 ORTHO05D008036 1.3e-06 57.0 63 49.2
Gohir.D08G147100 Gossypium hirsutum HOM05D007041 ORTHO05D008036 1.6e-06 56.6 106 43.4
Gorai.004G152600 Gossypium raimondii HOM05D007041 ORTHO05D008036 1.6e-06 56.6 106 43.4
Sed0010994 Sechium edule HOM05D007041 ORTHO05D008036 1.6e-06 56.6 34 70.6
CANSAT56G1227 Cannabis sativa HOM05D007041 ORTHO05D008036 2.1e-06 56.2 32 78.1
MD07G1146000 Malus domestica HOM05D007041 ORTHO05D008036 2.1e-06 56.2 88 39.8
Nitab4.5_0000223g0230 Nicotiana tabacum HOM05D007041 ORTHO05D008036 2.1e-06 56.2 42 61.9
Oeu009948.1 Olea europaea HOM05D007041 ORTHO05D008036 2.1e-06 56.2 46 52.2
Prupe.2G184300 Prunus persica HOM05D007041 ORTHO05D008036 2.1e-06 56.2 103 38.8
Sc01g0010130 Simmondsia chinensis HOM05D007041 ORTHO05D008036 2.1e-06 56.2 95 40.0
Ca_09497_v3 Cicer arietinum L. HOM05D007041 ORTHO05D008036 2.8e-06 55.8 44 56.8
FAN10G2988 Fragaria x ananassa HOM05D007041 ORTHO05D008036 3.6e-06 55.5 63 47.6
Manes.01G248300 Manihot esculenta HOM05D007041 ORTHO05D008036 3.6e-06 55.5 41 68.3
AUR62023489 Chenopodium quinoa HOM05D007041 ORTHO05D008036 4.8e-06 55.1 33 75.8
FAN06G2039 Fragaria x ananassa HOM05D007041 ORTHO05D008036 4.8e-06 55.1 63 47.6
FAN06G3979 Fragaria x ananassa HOM05D007041 ORTHO05D008036 4.8e-06 55.1 63 47.6
Potri.014G095600 Populus trichocarpa HOM05D007041 ORTHO05D008036 4.8e-06 55.1 51 58.8
CSS0019600 Camellia sinensis var. sinensis HOM05D007041 ORTHO05D008036 6.2e-06 54.7 95 40.0
Glyma.16G026800 Glycine max HOM05D007041 ORTHO05D008036 6.2e-06 54.7 123 31.7
Nitab4.5_0004161g0040 Nicotiana tabacum HOM05D007041 ORTHO05D008036 6.2e-06 54.7 42 59.5
Phvul.010G111500 Phaseolus vulgaris HOM05D007041 ORTHO05D008036 6.2e-06 54.7 47 53.2
Sabra14G0070100 Salix brachista HOM05D007041 ORTHO05D008036 6.2e-06 54.7 51 56.9
Sopen08g030330 Solanum pennellii HOM05D002045 ORTHO05D002014 6.2e-06 54.7 29 82.8
PGSC0003DMG400012302 Solanum tuberosum HOM05D007041 ORTHO05D008036 6.2e-06 54.7 29 82.8
Rhsim07G0083800 Rhododendron simsii HOM05D007041 ORTHO05D008036 8.1e-06 54.3 41 61.0


User provided reference genes

Program Settings