Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g15109 Nelumbo nucifera HOM05D000665 ORTHO05D000921 6.7e-122 440.7 216 100.0
Nn2g12467 Nelumbo nucifera HOM05D000665 ORTHO05D000921 7.1e-31 138.3 232 37.5
Nn1g08091 Nelumbo nucifera HOM05D033481 ORTHO05D000285 9.3e-23 111.3 235 32.8
Nn1g08111 Nelumbo nucifera HOM05D000665 ORTHO05D000285 1.2e-22 110.9 219 35.2
Nn1g00688 Nelumbo nucifera HOM05D000665 ORTHO05D000921 5.1e-21 105.5 92 53.3
CSS0029683 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.9e-15 87.0 226 29.2
CSS0000387 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 3.2e-15 86.3 219 29.2
CSS0047450 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 3.2e-15 86.3 226 29.2
CSS0004715 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.2e-14 84.3 225 28.9
Dinv29345 Davidia involucrata HOM05D000665 ORTHO05D000921 2.1e-14 83.6 211 29.9
CSS0041063 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.8e-13 80.5 120 35.0
TAR626G0805 Trochodendron aralioides HOM05D000665 ORTHO05D000285 3.9e-13 79.3 111 38.7
QL01p020889 Quercus lobata HOM05D000665 ORTHO05D000921 8.7e-13 78.2 98 40.8
CSS0007077 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.1e-12 77.8 104 39.4
Nn5g29893 Nelumbo nucifera HOM05D000665 ORTHO05D000140 1.1e-12 77.8 99 38.4
Nn6g31592 Nelumbo nucifera HOM05D000665 ORTHO05D000921 2.5e-12 76.6 70 50.0
CSS0008427 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 3.3e-12 76.3 219 28.3
CSS0028686 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 3.3e-12 76.3 219 28.3
CSS0049933 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 3.3e-12 76.3 115 34.8
Hma1.2p1_1786F.1_g302300 Hydrangea macrophylla HOM05D000665 ORTHO05D000921 3.3e-12 76.3 107 37.4
Hma1.2p1_2380F.1_g320966 Hydrangea macrophylla HOM05D000665 ORTHO05D000921 3.3e-12 76.3 217 27.6
COL.COLO4_25265 Corchorus olitorius HOM05D007209 ORTHO05D000921 2.4e-10 70.1 100 38.0
Eucgr.F03745 Eucalyptus grandis HOM05D000665 ORTHO05D000285 9.0e-10 68.2 99 36.4
Actinidia03712 Actinidia chinensis HOM05D000665 ORTHO05D000921 1.5e-09 67.4 203 26.1
Eucgr.H04051 Eucalyptus grandis HOM05D000665 ORTHO05D000285 2.6e-09 66.6 97 38.1
Atru.chr2.1871 Acer truncatum HOM05D001008 ORTHO05D003293 4.5e-09 65.9 106 34.0
Eucgr.B02784 Eucalyptus grandis HOM05D000665 ORTHO05D000285 4.5e-09 65.9 99 36.4
Eucgr.L00423 Eucalyptus grandis HOM05D000665 ORTHO05D000285 5.9e-09 65.5 99 36.4
TAR599G0002 Trochodendron aralioides HOM05D007209 ORTHO05D000921 5.9e-09 65.5 112 33.9
Eucgr.E03640 Eucalyptus grandis HOM05D000665 ORTHO05D000285 7.6e-09 65.1 100 35.0
CSS0046487 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.0e-08 64.7 227 25.1
Eucgr.B02958 Eucalyptus grandis HOM05D000665 ORTHO05D000285 1.0e-08 64.7 93 36.6
FvH4_7g00340 Fragaria vesca HOM05D003171 ORTHO05D000921 1.3e-08 64.3 107 32.7
Eucgr.K00902 Eucalyptus grandis HOM05D000665 ORTHO05D000285 1.7e-08 63.9 100 35.0
CANSAT25G0660 Cannabis sativa HOM05D000665 ORTHO05D000921 2.2e-08 63.5 113 30.1
Eucgr.C01733 Eucalyptus grandis HOM05D000665 ORTHO05D000285 2.2e-08 63.5 99 34.3
QL05p062248 Quercus lobata HOM05D003171 ORTHO05D000921 2.2e-08 63.5 217 26.3
FvH4_2g38660 Fragaria vesca HOM05D000665 ORTHO05D000140 2.9e-08 63.2 94 33.0
Nn4g25287 Nelumbo nucifera HOM05D000665 ORTHO05D277995 3.8e-08 62.8 77 45.5
Ciclev10006719m.g Citrus clementina HOM05D003171 ORTHO05D000921 5.0e-08 62.4 100 33.0
FAN15G1296 Fragaria x ananassa HOM05D000665 ORTHO05D003147 6.5e-08 62.0 94 31.9
HanXRQChr13g0396681 Helianthus annuus HOM05D000665 ORTHO05D000921 6.5e-08 62.0 76 39.5
Nn3g16139 Nelumbo nucifera HOM05D000665 ORTHO05D000285 6.5e-08 62.0 100 36.0
Nn3g20404 Nelumbo nucifera HOM05D000665 ORTHO05D000285 6.5e-08 62.0 100 36.0
RcHm_v2.0_Chr1g0354771 Rosa chinensis HOM05D003171 ORTHO05D000921 8.5e-08 61.6 102 34.3
CSS0039140 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.1e-07 61.2 227 24.7
ClCG10G015090 Citrullus lanatus HOM05D007209 ORTHO05D000921 1.1e-07 61.2 116 33.6
MELO3C035039.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.1e-07 61.2 97 33.0
Dinv03607 Davidia involucrata HOM05D000665 ORTHO05D000921 1.1e-07 61.2 205 28.3
FAN27G2099 Fragaria x ananassa HOM05D000665 ORTHO05D000140 1.1e-07 61.2 94 31.9
TAR597G0002 Trochodendron aralioides HOM05D007209 ORTHO05D000921 1.1e-07 61.2 115 32.2
MELO3C030897.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.4e-07 60.8 111 32.4
Hund23719 Selenicereus undatus HOM05D000876 ORTHO05D000285 1.4e-07 60.8 107 29.0
Hund30880 Selenicereus undatus HOM05D000876 ORTHO05D000285 1.4e-07 60.8 107 29.0
Atru.chr5.3274 Acer truncatum HOM05D003171 ORTHO05D000921 1.9e-07 60.5 101 31.7
TAR080G0001 Trochodendron aralioides HOM05D000034 ORTHO05D000037 3.2e-07 59.7 208 23.6
CANSAT25G2398 Cannabis sativa HOM05D000665 ORTHO05D000921 4.2e-07 59.3 225 24.9
Dinv43770 Davidia involucrata HOM05D000665 ORTHO05D000921 4.2e-07 59.3 190 29.5
Nn6g31709 Nelumbo nucifera HOM05D000665 ORTHO05D000921 4.2e-07 59.3 95 33.7
TWI09G1246 Tripterygium wilfordii HOM05D000665 ORTHO05D000921 4.2e-07 59.3 107 34.6
TAR555G0001 Trochodendron aralioides HOM05D000034 ORTHO05D000037 4.2e-07 59.3 99 35.4
COL.COLO4_20107 Corchorus olitorius HOM05D007209 ORTHO05D000921 5.5e-07 58.9 108 34.3
MELO3C034280.2 Cucumis melo HOM05D007209 ORTHO05D000921 5.5e-07 58.9 96 33.3
Dinv16127 Davidia involucrata HOM05D007209 ORTHO05D000921 5.5e-07 58.9 96 38.5
CANSAT54G0727 Cannabis sativa HOM05D007209 ORTHO05D000921 7.2e-07 58.5 105 30.5
Hund14971 Selenicereus undatus HOM05D000876 ORTHO05D000285 7.2e-07 58.5 107 28.0
CANSAT11G2265 Cannabis sativa HOM05D007209 ORTHO05D000921 9.3e-07 58.2 107 30.8
Ciclev10010474m.g Citrus clementina HOM05D003171 ORTHO05D000921 1.2e-06 57.8 152 31.6
Nn4g26314 Nelumbo nucifera HOM05D000665 ORTHO05D000921 1.2e-06 57.8 37 70.3
COL.COLO4_18963 Corchorus olitorius HOM05D000665 ORTHO05D000140 1.6e-06 57.4 106 30.2
MELO3C030185.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.6e-06 57.4 147 28.6
Lj1g0016372 Lotus japonicus HOM05D000665 ORTHO05D000140 1.6e-06 57.4 100 34.0
MD12G1140100 Malus domestica HOM05D002354 ORTHO05D002469 1.6e-06 57.4 99 30.3
Nn1g02527 Nelumbo nucifera HOM05D000665 ORTHO05D000921 1.6e-06 57.4 99 35.4
MELO3C030265.2 Cucumis melo HOM05D007209 ORTHO05D000921 2.1e-06 57.0 97 32.0
Atru.chr6.630 Acer truncatum HOM05D003171 ORTHO05D000921 2.7e-06 56.6 204 25.5
Dinv39109 Davidia involucrata HOM05D000665 ORTHO05D000921 2.7e-06 56.6 104 34.6
Eucgr.K03150 Eucalyptus grandis HOM05D000665 ORTHO05D000285 2.7e-06 56.6 77 37.7
Ca_11671_v3 Cicer arietinum L. HOM05D000665 ORTHO05D000140 3.6e-06 56.2 133 28.6
Eucgr.L02702 Eucalyptus grandis HOM05D000665 ORTHO05D000285 3.6e-06 56.2 100 34.0
Glyma.02G193300 Glycine max HOM05D000665 ORTHO05D000140 3.6e-06 56.2 92 32.6
QL07p026924 Quercus lobata HOM05D000665 ORTHO05D000140 3.6e-06 56.2 112 32.1
TWI12G0661 Tripterygium wilfordii HOM05D000665 ORTHO05D003147 3.6e-06 56.2 97 33.0
MELO3C032092.2 Cucumis melo HOM05D007209 ORTHO05D000921 4.6e-06 55.8 81 38.3
CiPaw.04G117800 Carya illinoinensis HOM05D000876 ORTHO05D000285 6.1e-06 55.5 92 34.8
Psat0s3985g0040 Pisum sativum HOM05D000665 ORTHO05D000140 6.1e-06 55.5 111 29.7
CSS0037006 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 7.9e-06 55.1 120 28.3


User provided reference genes

Program Settings