Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g15094 Nelumbo nucifera HOM05D004717 ORTHO05D005636 6.0e-40 167.2 90 100.0
Nn2g12497 Nelumbo nucifera HOM05D004717 ORTHO05D005636 7.3e-38 160.2 86 100.0
PGR142G2311 Punica granatum HOM05D004717 ORTHO05D005636 1.7e-07 59.3 49 59.2
arahy.Tifrunner.gnm1.ann1.8YZR55 Arachis hypogaea HOM05D004717 ORTHO05D005636 2.3e-07 58.9 47 63.8
arahy.Tifrunner.gnm1.ann1.TS1LPS Arachis hypogaea HOM05D004717 ORTHO05D005636 2.3e-07 58.9 47 63.8
Gohir.A12G132100 Gossypium hirsutum HOM05D004717 ORTHO05D005636 3.0e-07 58.5 44 65.9
PGR142G4258 Punica granatum HOM05D004717 ORTHO05D005636 3.9e-07 58.2 38 71.1
TWI74G1267 Tripterygium wilfordii HOM05D004717 ORTHO05D005636 3.9e-07 58.2 49 59.2
Aqoxy6G00094 Aquilegia oxysepala HOM05D004717 ORTHO05D005636 5.1e-07 57.8 45 64.4
MELO3C022525.2 Cucumis melo HOM05D004717 ORTHO05D005636 6.6e-07 57.4 44 63.6
Gorai.008G146900 Gossypium raimondii HOM05D004717 ORTHO05D005636 8.7e-07 57.0 40 70.0
Lalb_Chr24g0398391 Lupinus albus HOM05D004717 ORTHO05D005636 8.7e-07 57.0 44 63.6
Rhsim02G0075200 Rhododendron simsii HOM05D004717 ORTHO05D005636 8.7e-07 57.0 44 61.4
EL10Ac9g21225 Beta vulgaris HOM05D004717 ORTHO05D005636 1.1e-06 56.6 44 63.6
Psat1g123480 Pisum sativum HOM05D004717 ORTHO05D005636 1.1e-06 56.6 40 67.5
Carub.0006s0723 Capsella rubella HOM05D004717 ORTHO05D005636 1.5e-06 56.2 44 63.6
Lsat_1_v5_gn_9_25720 Lactuca sativa HOM05D004717 ORTHO05D005636 1.5e-06 56.2 44 63.6
Lj2g0014996 Lotus japonicus HOM05D004717 ORTHO05D005636 1.5e-06 56.2 44 61.4
Sp6g34610 Schrenkiella parvula HOM05D004717 ORTHO05D005636 1.5e-06 56.2 44 63.6
vmacro15638 Vaccinium macrocarpon HOM05D004717 ORTHO05D005636 1.5e-06 56.2 61 50.8
Duzib132G0983 Durio zibethinus HOM05D004717 ORTHO05D005636 2.5e-06 55.5 40 67.5
Thhalv10014725m.g Eutrema salsugineum HOM05D004717 ORTHO05D005636 2.5e-06 55.5 44 61.4
HanXRQChr08g0237151 Helianthus annuus HOM05D004717 ORTHO05D005636 2.5e-06 55.5 39 69.2
Lj5g0015714 Lotus japonicus HOM05D004717 ORTHO05D005636 2.5e-06 55.5 44 59.1
Prupe.1G348900 Prunus persica HOM05D004717 ORTHO05D005636 2.5e-06 55.5 39 66.7
Sc08g0003750 Simmondsia chinensis HOM05D004717 ORTHO05D005636 2.5e-06 55.5 39 66.7
CSS0046676 Camellia sinensis var. sinensis HOM05D004717 ORTHO05D005636 3.3e-06 55.1 44 61.4
CsaV3_6G005870 Cucumis sativus L. HOM05D004717 ORTHO05D005636 3.3e-06 55.1 44 59.1
Dinv02673 Davidia involucrata HOM05D004717 ORTHO05D005636 3.3e-06 55.1 39 66.7
MD16G1003900 Malus domestica HOM05D004717 ORTHO05D005636 3.3e-06 55.1 39 69.2
Medtr6g075160 Medicago truncatula HOM05D004717 ORTHO05D005636 4.3e-06 54.7 44 61.4
TPR.G9035 Trifolium pratense HOM05D004717 ORTHO05D005636 4.3e-06 54.7 44 63.6
VMungo0464G0417 Vigna mungo HOM05D004717 ORTHO05D005636 4.3e-06 54.7 44 59.1
AL6G18770 Arabidopsis lyrata HOM05D004717 ORTHO05D005636 5.6e-06 54.3 44 61.4
AT5G08335 Arabidopsis thaliana HOM05D004717 ORTHO05D005636 5.6e-06 54.3 44 61.4
Ciclev10016775m.g Citrus clementina HOM05D004717 ORTHO05D005636 5.6e-06 54.3 44 65.9
Haze_11783 Corylus avellana HOM05D004717 ORTHO05D005636 5.6e-06 54.3 65 49.2
Manes.08G039100 Manihot esculenta HOM05D004717 ORTHO05D005636 5.6e-06 54.3 39 64.1
TPR.G28016 Trifolium pratense HOM05D004717 ORTHO05D005636 5.6e-06 54.3 44 61.4
Aa31LG3G18230 Aethionema arabicum HOM05D006471 ORTHO05D005636 7.3e-06 53.9 39 66.7
AUR62012906 Chenopodium quinoa HOM05D004717 ORTHO05D005636 7.3e-06 53.9 44 59.1
Glyma.16G218800 Glycine max HOM05D004717 ORTHO05D005636 7.3e-06 53.9 44 59.1
Thecc.02G155400 Theobroma cacao HOM05D004717 ORTHO05D005636 7.3e-06 53.9 55 52.7
GSVIVG01038782001 Vitis vinifera HOM05D004717 ORTHO05D005636 7.3e-06 53.9 46 54.3
Ah.01g024100 Amaranthus hybridus HOM05D004717 ORTHO05D005636 9.6e-06 53.5 44 52.3
Lj3g0022258 Lotus japonicus HOM05D004717 ORTHO05D005636 9.6e-06 53.5 44 56.8


User provided reference genes

Program Settings