Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g14913 Nelumbo nucifera HOM05D004164 ORTHO05D004891 1.1e-139 500.0 258 100.0
Nn3g21861 Nelumbo nucifera HOM05D004164 ORTHO05D004891 4.3e-83 312.0 337 57.6
TAR365G1146 Trochodendron aralioides HOM05D004164 ORTHO05D004891 3.1e-73 279.3 332 52.1
PSO173G0010 Papaver somniferum HOM05D004164 ORTHO05D004891 1.6e-66 256.9 333 47.7
PSO832G0925 Papaver somniferum HOM05D004164 ORTHO05D004891 4.0e-65 252.3 334 48.2
PSO782G1386 Papaver somniferum HOM05D004164 ORTHO05D004891 3.4e-64 249.2 335 48.7
Nn4g25427 Nelumbo nucifera HOM05D004164 ORTHO05D004891 1.7e-63 246.9 337 43.6
PSO063G3797 Papaver somniferum HOM05D004164 ORTHO05D004891 5.5e-62 241.9 332 45.5
PSO210G6256 Papaver somniferum HOM05D004164 ORTHO05D004891 2.7e-61 239.6 334 45.8
PSO507G0030 Papaver somniferum HOM05D004164 ORTHO05D004891 4.6e-61 238.8 338 43.8
PSO832G1962 Papaver somniferum HOM05D004164 ORTHO05D004891 6.0e-61 238.4 337 43.9
PSO507G0017 Papaver somniferum HOM05D004164 ORTHO05D004891 1.8e-60 236.9 334 44.3
PSO210G5660 Papaver somniferum HOM05D004164 ORTHO05D004891 2.3e-60 236.5 334 44.9
PSO761G0590 Papaver somniferum HOM05D004164 ORTHO05D004891 3.0e-60 236.1 334 44.6
PSO832G2156 Papaver somniferum HOM05D004164 ORTHO05D004891 3.0e-60 236.1 337 44.2
PSO832G4194 Papaver somniferum HOM05D004164 ORTHO05D004891 3.9e-60 235.7 334 43.7
PSO761G0549 Papaver somniferum HOM05D004164 ORTHO05D004891 1.6e-58 230.3 334 43.7
Aqoxy2G03733 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 1.0e-55 221.1 325 43.1
PSO173G0166 Papaver somniferum HOM05D004164 ORTHO05D004891 1.1e-54 217.6 203 58.1
MBI18_g40410_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 5.5e-54 215.3 337 43.0
PSO781G0333 Papaver somniferum HOM05D004164 ORTHO05D004891 1.6e-50 203.8 329 41.9
PSO507G0015 Papaver somniferum HOM05D004164 ORTHO05D004891 8.2e-50 201.4 204 54.9
MD05G1043200 Malus domestica HOM05D004164 ORTHO05D004891 5.3e-49 198.7 326 41.1
MBI18_g36466_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 5.9e-48 195.3 325 41.5
PSO210G2683 Papaver somniferum HOM05D004164 ORTHO05D004891 5.9e-48 195.3 326 40.5
PGR042G3604 Punica granatum HOM05D004164 ORTHO05D004891 2.9e-47 193.0 324 41.4
MELO3C018623.2 Cucumis melo HOM05D004164 ORTHO05D004891 3.8e-47 192.6 326 39.6
Actinidia24002 Actinidia chinensis HOM05D004164 ORTHO05D004891 1.4e-46 190.7 326 41.4
TAR381G0722 Trochodendron aralioides HOM05D004164 ORTHO05D004891 1.9e-46 190.3 325 41.2
Potri.017G051800 Populus trichocarpa HOM05D004164 ORTHO05D004891 4.2e-46 189.1 331 40.2
AL8G41570 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 5.5e-46 188.7 321 38.9
Prupe.8G064000 Prunus persica HOM05D004164 ORTHO05D004891 7.2e-46 188.3 326 39.3
VMungo0540G2402 Vigna mungo HOM05D004164 ORTHO05D004891 7.2e-46 188.3 328 40.9
Thecc.02G135100 Theobroma cacao HOM05D004164 ORTHO05D004891 9.3e-46 188.0 326 40.2
arahy.Tifrunner.gnm1.ann1.IF3X13 Arachis hypogaea HOM05D004164 ORTHO05D004891 1.2e-45 187.6 311 40.5
Dinv24178 Davidia involucrata HOM05D004164 ORTHO05D004891 1.2e-45 187.6 326 39.9
Duzib132G1201 Durio zibethinus HOM05D004164 ORTHO05D004891 1.2e-45 187.6 326 39.9
Gohir.A04G114200 Gossypium hirsutum HOM05D004164 ORTHO05D004891 1.2e-45 187.6 326 40.5
Sed0011830 Sechium edule HOM05D004164 ORTHO05D004891 1.2e-45 187.6 326 38.7
AL8G41600 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 1.6e-45 187.2 321 38.6
Glyma.08G178100 Glycine max HOM05D004164 ORTHO05D004891 2.1e-45 186.8 328 39.9
Atru.chr6.1169 Acer truncatum HOM05D004164 ORTHO05D004891 2.7e-45 186.4 326 39.6
Ciclev10028812m.g Citrus clementina HOM05D004164 ORTHO05D004891 2.7e-45 186.4 326 38.3
arahy.Tifrunner.gnm1.ann1.XH6BES Arachis hypogaea HOM05D004164 ORTHO05D004891 3.5e-45 186.0 326 39.3
PSO761G0410 Papaver somniferum HOM05D004164 ORTHO05D004891 4.6e-45 185.7 327 39.1
Aqoxy6G02071 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 6.1e-45 185.3 326 39.6
CSS0040430 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 6.1e-45 185.3 324 40.7
CiPaw.05G034200 Carya illinoinensis HOM05D004164 ORTHO05D004891 6.1e-45 185.3 326 39.6
Sabra17G0043400 Salix brachista HOM05D004164 ORTHO05D004891 6.1e-45 185.3 330 39.4
SabraUnG0002700 Salix brachista HOM05D004164 ORTHO05D004891 6.1e-45 185.3 330 39.4
TPR.G10321 Trifolium pratense HOM05D004164 ORTHO05D004891 7.9e-45 184.9 326 39.9
Hma1.2p1_0784F.1_g217100 Hydrangea macrophylla HOM05D004164 ORTHO05D004891 1.3e-44 184.1 326 39.3
CSS0002795 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 1.8e-44 183.7 324 40.4
CsaV3_7G006720 Cucumis sativus L. HOM05D004164 ORTHO05D004891 2.3e-44 183.3 313 40.3
Phvul.006G205400 Phaseolus vulgaris HOM05D004164 ORTHO05D004891 2.3e-44 183.3 326 39.0
AT5G64250 Arabidopsis thaliana HOM05D004164 ORTHO05D004891 3.9e-44 182.6 321 38.6
Gorai.008G016000 Gossypium raimondii HOM05D004164 ORTHO05D004891 3.9e-44 182.6 326 40.2
QL11p022503 Quercus lobata HOM05D004164 ORTHO05D004891 3.9e-44 182.6 326 38.3
Manes.07G033800 Manihot esculenta HOM05D004164 ORTHO05D004891 5.1e-44 182.2 327 39.8
CARHR278160 Cardamine hirsuta HOM05D004164 ORTHO05D004891 6.7e-44 181.8 325 38.8
Gohir.D12G015900 Gossypium hirsutum HOM05D004164 ORTHO05D004891 8.7e-44 181.4 325 40.3
TWI14G1169 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 8.7e-44 181.4 326 37.7
Lj4g0000280 Lotus japonicus HOM05D004164 ORTHO05D004891 1.1e-43 181.0 326 39.6
Medtr3g069190 Medicago truncatula HOM05D004164 ORTHO05D004891 1.1e-43 181.0 326 39.3
CANSAT11G1236 Cannabis sativa HOM05D004164 ORTHO05D004891 1.5e-43 180.6 326 39.0
RcHm_v2.0_Chr6g0271551 Rosa chinensis HOM05D004164 ORTHO05D004891 1.5e-43 180.6 326 38.3
Sp2g27310 Schrenkiella parvula HOM05D004164 ORTHO05D004891 1.5e-43 180.6 325 38.8
ClCG09G015620 Citrullus lanatus HOM05D004164 ORTHO05D004891 1.9e-43 180.3 326 38.3
Lalb_Chr20g0122971 Lupinus albus HOM05D004164 ORTHO05D004891 1.9e-43 180.3 326 39.9
GSVIVG01015759001 Vitis vinifera HOM05D004164 ORTHO05D004891 1.9e-43 180.3 327 40.1
Cfa005671 Carpinus fangiana HOM05D004164 ORTHO05D004891 2.5e-43 179.9 325 37.2
BcaC01g02680 Brassica carinata HOM05D004164 ORTHO05D004891 4.3e-43 179.1 325 39.7
BolC3t18463H Brassica oleracea HOM05D004164 ORTHO05D004891 4.3e-43 179.1 325 39.7
Ca_16502_v3 Cicer arietinum L. HOM05D004164 ORTHO05D004891 4.3e-43 179.1 325 40.0
vmacro01837 Vaccinium macrocarpon HOM05D004164 ORTHO05D004891 4.3e-43 179.1 326 39.6
HPP92_004281 Vanilla planifolia HOM05D004164 ORTHO05D004891 4.3e-43 179.1 306 39.2
Gohir.A12G015600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 5.7e-43 178.7 325 40.0
Thhalv10004559m.g Eutrema salsugineum HOM05D004164 ORTHO05D004891 7.4e-43 178.3 325 38.5
FAN18G3873 Fragaria x ananassa HOM05D004164 ORTHO05D004891 7.4e-43 178.3 326 37.1
PGSC0003DMG400012550 Solanum tuberosum HOM05D004164 ORTHO05D004891 7.4e-43 178.3 325 40.3
Carub.0008s2504 Capsella rubella HOM05D004164 ORTHO05D004891 9.7e-43 177.9 325 39.4
Eucgr.G00847 Eucalyptus grandis HOM05D004164 ORTHO05D004891 9.7e-43 177.9 327 38.5
Peaxi162Scf01060g00013 Petunia axillaris HOM05D004164 ORTHO05D004891 1.3e-42 177.6 325 39.7
A06p30940 Brassica napus HOM05D004164 ORTHO05D004891 1.6e-42 177.2 325 38.5
BraA06t26033Z Brassica rapa HOM05D004164 ORTHO05D004891 1.6e-42 177.2 325 38.5
Gorai.012G142600 Gossypium raimondii HOM05D004164 ORTHO05D004891 1.6e-42 177.2 326 39.9
THA.LOC104799917 Tarenaya hassleriana HOM05D004164 ORTHO05D004891 1.6e-42 177.2 326 37.7
Nitab4.5_0000863g0200 Nicotiana tabacum HOM05D004164 ORTHO05D004891 2.8e-42 176.4 325 40.6
Aa31LG1G17650 Aethionema arabicum HOM05D004164 ORTHO05D004891 3.7e-42 176.0 325 38.2
C03p62030 Brassica napus HOM05D004164 ORTHO05D004891 3.7e-42 176.0 325 39.4
HanXRQChr10g0291731 Helianthus annuus HOM05D004164 ORTHO05D004891 3.7e-42 176.0 326 37.1
Sopen01g047880 Solanum pennellii HOM05D004164 ORTHO05D004891 3.7e-42 176.0 325 40.0
AUR62010154 Chenopodium quinoa HOM05D004164 ORTHO05D004891 4.8e-42 175.6 306 39.5
ATR0782G002 Amborella trichopoda HOM05D004164 ORTHO05D004891 6.3e-42 175.3 322 40.1
Sc08g0003530 Simmondsia chinensis HOM05D004164 ORTHO05D004891 8.2e-42 174.9 325 38.2
TWI59G0238 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 1.1e-41 174.5 325 37.5
Solyc01g105370.4 Solanum lycopersicum HOM05D004164 ORTHO05D004891 1.4e-41 174.1 325 39.7
BcaB02g09775 Brassica carinata HOM05D004164 ORTHO05D004891 2.4e-41 173.3 325 37.5
CAN.G523.53 Capsicum annuum HOM05D004164 ORTHO05D004891 4.1e-41 172.6 325 39.1
Cc02_g21290 Coffea canephora HOM05D004164 ORTHO05D004891 4.1e-41 172.6 325 38.2
DCAR_001777 Daucus carota HOM05D004164 ORTHO05D004891 4.1e-41 172.6 323 37.8
ECA234G4615 Erigeron canadensis HOM05D004164 ORTHO05D004891 1.2e-40 171.0 326 36.8
Lj6g0000010 Lotus japonicus HOM05D004164 ORTHO05D004891 1.2e-40 171.0 327 40.1
Psat5g128640 Pisum sativum HOM05D004164 ORTHO05D004891 1.2e-40 171.0 327 37.6
Lj5A235T51 Lonicera japonica HOM05D004164 ORTHO05D004891 1.5e-40 170.6 326 37.4
MSTRG.20292 Avicennia marina HOM05D004164 ORTHO05D004891 2.0e-40 170.2 326 37.1
AUR62013150 Chenopodium quinoa HOM05D004164 ORTHO05D004891 3.4e-40 169.5 341 36.7
Rhsim11G0139400 Rhododendron simsii HOM05D004164 ORTHO05D004891 3.4e-40 169.5 324 38.9
SMO143G0159 Selaginella moellendorffii HOM05D004164 ORTHO05D004891 3.4e-40 169.5 330 35.5
Pp3c2_200 Physcomitrium patens HOM05D004164 ORTHO05D004891 4.5e-40 169.1 329 36.8
Zm00001eb033580 Zea mays HOM05D004164 ORTHO05D004891 4.5e-40 169.1 328 38.4
Lsat_1_v5_gn_5_108141 Lactuca sativa HOM05D004164 ORTHO05D004891 7.7e-40 168.3 326 37.7
RcHm_v2.0_Chr6g0271711 Rosa chinensis HOM05D004164 ORTHO05D004891 2.9e-39 166.4 327 37.3
Ah.01g022180 Amaranthus hybridus HOM05D004164 ORTHO05D004891 1.4e-38 164.1 326 35.6
Migut.B00589 Erythranthe guttata HOM05D004164 ORTHO05D004891 1.4e-38 164.1 326 37.4
Gohir.D04G155600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 1.4e-38 164.1 326 37.7
Hund00072 Selenicereus undatus HOM05D004164 ORTHO05D004891 3.2e-38 162.9 322 36.6
Lj6g0021052 Lotus japonicus HOM05D004164 ORTHO05D004891 4.2e-38 162.5 204 48.5
Os08g0485400 Oryza sativa ssp. japonica HOM05D004164 ORTHO05D004891 4.2e-38 162.5 204 46.1
Mapoly0043s0005 Marchantia polymorpha HOM05D004164 ORTHO05D004891 1.6e-37 160.6 331 34.4
SalBow5G1609 Salvia bowleyana HOM05D004164 ORTHO05D004891 2.1e-37 160.2 357 35.6
SalBow5G4318 Salvia bowleyana HOM05D004164 ORTHO05D004891 3.6e-37 159.5 357 35.6
Cpa.g.sc42.29 Carica papaya HOM05D004164 ORTHO05D004891 6.1e-37 158.7 355 35.2
FAN15G1714 Fragaria x ananassa HOM05D004164 ORTHO05D004891 1.0e-36 157.9 204 45.1
MBI02_g02171_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 1.8e-36 157.1 243 41.6
FvH4_5g07040 Fragaria vesca HOM05D004164 ORTHO05D004891 9.7e-35 151.4 253 37.9
Oeu007975.1 Olea europaea HOM05D004164 ORTHO05D004891 5.3e-33 145.6 398 31.7
AagrBONN_evm.TU.Sc2ySwM_228.2787 Anthoceros agrestis HOM05D004164 ORTHO05D004891 5.0e-31 139.0 324 31.5
PSO400G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 8.5e-31 138.3 98 69.4
SGA_v2.0_scaffold83G26314 Striga asiatica HOM05D004164 ORTHO05D004891 5.7e-27 125.6 325 33.2
EL10Ac9g21504 Beta vulgaris HOM05D004164 ORTHO05D004891 9.7e-27 124.8 319 32.0
Nitab4.5_0002401g0010 Nicotiana tabacum HOM05D004164 ORTHO05D004891 1.7e-23 114.0 149 46.3
Prupe.8G063800 Prunus persica HOM05D004164 ORTHO05D004891 2.9e-23 113.2 211 38.9
Haze_10597 Corylus avellana HOM05D004164 ORTHO05D004891 8.0e-21 105.1 196 36.7
PSO646G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 1.4e-20 104.4 177 40.1
PSO541G2216 Papaver somniferum HOM05D004164 ORTHO05D004891 1.2e-16 91.3 197 36.0
Cfa026765 Carpinus fangiana HOM05D004164 ORTHO05D004891 1.3e-10 71.2 281 28.5
FvH4_2g11890 Fragaria vesca HOM05D004164 ORTHO05D004891 5.4e-09 65.9 135 34.1
PRCOL_00000119 Prasinoderma coloniale HOM05D004164 ORTHO05D004891 4.5e-08 62.8 159 32.1
FAN24G2526 Fragaria x ananassa HOM05D004164 ORTHO05D004891 1.0e-07 61.6 105 35.2
Pp3s30_626 Physcomitrium patens HOM05D004164 ORTHO05D004891 1.7e-07 60.8 130 30.0
TPR.G11284 Trifolium pratense HOM05D004164 ORTHO05D004891 5.0e-07 59.3 66 53.0
FAN24G1884 Fragaria x ananassa HOM05D004164 ORTHO05D004891 6.5e-07 58.9 163 30.1
Cfa023826 Carpinus fangiana HOM05D004164 ORTHO05D004891 3.2e-06 56.6 127 30.7


User provided reference genes

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