Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g14746 Nelumbo nucifera HOM05D006789 ORTHO05D008460 2.0e-104 382.5 196 100.0
TAR633G0905 Trochodendron aralioides HOM05D006789 ORTHO05D008460 2.0e-77 292.7 193 78.2
MBI19_g19122_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 1.1e-75 287.0 190 76.3
Dinv24597 Davidia involucrata HOM05D006789 ORTHO05D008460 6.2e-74 281.2 185 78.4
GSVIVG01027313001 Vitis vinifera HOM05D006789 ORTHO05D008460 2.4e-70 269.2 185 73.0
Atru.chr3.2036 Acer truncatum HOM05D006789 ORTHO05D008460 3.2e-70 268.9 184 73.4
Ciclev10029282m.g Citrus clementina HOM05D006789 ORTHO05D008460 2.1e-69 266.2 189 71.4
Gohir.A06G170900 Gossypium hirsutum HOM05D006789 ORTHO05D008460 4.6e-69 265.0 191 71.2
Gorai.N006500 Gossypium raimondii HOM05D006789 ORTHO05D008460 6.0e-69 264.6 191 70.7
Duzib106G0468 Durio zibethinus HOM05D006789 ORTHO05D008460 1.0e-68 263.8 190 71.6
TWI38G1707 Tripterygium wilfordii HOM05D006789 ORTHO05D008460 2.3e-68 262.7 188 71.3
arahy.Tifrunner.gnm1.ann1.KMQ9TB Arachis hypogaea HOM05D006789 ORTHO05D008460 6.6e-68 261.2 184 71.7
arahy.Tifrunner.gnm1.ann1.G6AZCI Arachis hypogaea HOM05D006789 ORTHO05D008460 8.6e-68 260.8 184 71.7
Gohir.D06G178700 Gossypium hirsutum HOM05D006789 ORTHO05D008460 8.6e-68 260.8 191 69.6
CiPaw.14G037500 Carya illinoinensis HOM05D006789 ORTHO05D008460 1.1e-67 260.4 190 71.6
PGR044G1098 Punica granatum HOM05D006789 ORTHO05D008460 1.9e-67 259.6 178 73.6
Hma1.2p1_0892F.1_g233210 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 4.3e-67 258.5 179 72.6
Lsat_1_v5_gn_2_28141 Lactuca sativa HOM05D006789 ORTHO05D008460 2.8e-66 255.8 190 70.5
Lalb_Chr15g0079361 Lupinus albus HOM05D006789 ORTHO05D008460 2.8e-66 255.8 179 72.6
Thecc.10G129500 Theobroma cacao HOM05D006789 ORTHO05D008460 2.8e-66 255.8 177 72.9
HanXRQChr06g0181521 Helianthus annuus HOM05D006789 ORTHO05D008460 6.2e-66 254.6 184 72.8
CDE08G0307 Ceratophyllum demersum HOM05D006789 ORTHO05D008460 8.1e-66 254.2 186 70.4
Potri.008G012100 Populus trichocarpa HOM05D006789 ORTHO05D008460 1.4e-65 253.4 173 72.8
Prupe.2G061000 Prunus persica HOM05D006789 ORTHO05D008460 2.3e-65 252.7 184 72.3
DCAR_006626 Daucus carota HOM05D006789 ORTHO05D008460 5.2e-65 251.5 174 71.8
Aqoxy1G00021 Aquilegia oxysepala HOM05D006789 ORTHO05D008460 6.8e-65 251.1 176 73.3
SGA_v2.0_scaffold196G40989 Striga asiatica HOM05D006789 ORTHO05D008460 6.8e-65 251.1 189 66.7
Glyma.06G315000 Glycine max HOM05D006789 ORTHO05D008460 8.9e-65 250.8 177 72.9
Lj3g0008710 Lotus japonicus HOM05D006789 ORTHO05D008460 1.2e-64 250.4 200 65.0
Hund00694 Selenicereus undatus HOM05D006789 ORTHO05D008460 3.4e-64 248.8 194 66.5
CANSAT56G4131 Cannabis sativa HOM05D006789 ORTHO05D008460 4.4e-64 248.4 195 66.7
Haze_03403 Corylus avellana HOM05D006789 ORTHO05D008460 4.4e-64 248.4 206 66.5
Sabra08G0007400 Salix brachista HOM05D006789 ORTHO05D008460 5.8e-64 248.1 170 72.4
Glyma.04G129000 Glycine max HOM05D006789 ORTHO05D008460 7.5e-64 247.7 190 68.9
Manes.10G064901 Manihot esculenta HOM05D006789 ORTHO05D008460 7.5e-64 247.7 167 76.0
Oeu013184.1 Olea europaea HOM05D006789 ORTHO05D008460 9.9e-64 247.3 195 66.2
EL10Ac4g08777 Beta vulgaris HOM05D006789 ORTHO05D008460 1.3e-63 246.9 190 65.8
Eucgr.J00312 Eucalyptus grandis HOM05D006789 ORTHO05D008460 2.2e-63 246.1 182 68.7
Medtr3g006790 Medicago truncatula HOM05D006789 ORTHO05D008460 2.9e-63 245.7 179 70.9
ClCG05G022140 Citrullus lanatus HOM05D006789 ORTHO05D008460 4.9e-63 245.0 176 71.0
RcHm_v2.0_Chr1g0331321 Rosa chinensis HOM05D006789 ORTHO05D008460 4.9e-63 245.0 188 67.6
MELO3C012309.2 Cucumis melo HOM05D006789 ORTHO05D008460 6.4e-63 244.6 182 68.1
CsaV3_5G034990 Cucumis sativus L. HOM05D006789 ORTHO05D008460 6.4e-63 244.6 187 66.3
ECA238G4254 Erigeron canadensis HOM05D006789 ORTHO05D008460 6.4e-63 244.6 183 68.9
Peaxi162Scf00217g00626 Petunia axillaris HOM05D006789 ORTHO05D008460 6.4e-63 244.6 190 67.4
SGA_v2.0_scaffold196G40996 Striga asiatica HOM05D006789 ORTHO05D008460 6.4e-63 244.6 189 65.6
SalBow4G0168 Salvia bowleyana HOM05D006789 ORTHO05D008460 8.3e-63 244.2 197 64.5
Sc22g0002280 Simmondsia chinensis HOM05D006789 ORTHO05D001455 8.3e-63 244.2 187 67.9
TPR.G25521 Trifolium pratense HOM05D006789 ORTHO05D008460 1.1e-62 243.8 178 70.2
vmacro13786 Vaccinium macrocarpon HOM05D006789 ORTHO05D008460 1.1e-62 243.8 213 63.4
Rhsim07G0072100 Rhododendron simsii HOM05D006789 ORTHO05D008460 1.4e-62 243.4 199 64.8
VMungo0647G0732 Vigna mungo HOM05D006789 ORTHO05D008460 1.4e-62 243.4 190 67.9
MSTRG.5084 Avicennia marina HOM05D006789 ORTHO05D008460 4.1e-62 241.9 176 69.9
PSO339G2606 Papaver somniferum HOM05D006789 ORTHO05D008460 5.4e-62 241.5 190 66.3
THA.LOC104826955 Tarenaya hassleriana HOM05D006789 ORTHO05D008460 5.4e-62 241.5 172 71.5
MD02G1265000 Malus domestica HOM05D006789 ORTHO05D008460 7.1e-62 241.1 192 67.2
Thhalv10014633m.g Eutrema salsugineum HOM05D006789 ORTHO05D008460 2.7e-61 239.2 179 67.0
FvH4_7g05010 Fragaria vesca HOM05D006789 ORTHO05D008460 6.0e-61 238.0 184 66.8
Phvul.008G161900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 6.0e-61 238.0 177 68.4
Os01g0265700 Oryza sativa ssp. japonica HOM05D006789 ORTHO05D008460 1.3e-60 236.9 180 67.2
Sp6g37890 Schrenkiella parvula HOM05D006789 ORTHO05D008460 1.3e-60 236.9 181 65.2
BcaC06g32200 Brassica carinata HOM05D006789 ORTHO05D008460 1.7e-60 236.5 183 64.5
BraA10t45166Z Brassica rapa HOM05D006789 ORTHO05D008460 1.7e-60 236.5 193 63.2
Sopen10g012840 Solanum pennellii HOM05D006789 ORTHO05D008460 1.7e-60 236.5 187 66.3
Solyc10g039380.2 Solanum lycopersicum HOM05D006789 ORTHO05D008460 2.3e-60 236.1 187 66.3
Actinidia19614 Actinidia chinensis HOM05D000583 ORTHO05D000442 3.0e-60 235.7 167 73.7
A10p31220 Brassica napus HOM05D006789 ORTHO05D008460 3.0e-60 235.7 179 65.9
Carub.0006s0385 Capsella rubella HOM05D006789 ORTHO05D008460 3.0e-60 235.7 185 64.9
FAN06G2149 Fragaria x ananassa HOM05D006789 ORTHO05D008460 3.0e-60 235.7 190 64.7
BolC9t59933H Brassica oleracea HOM05D006789 ORTHO05D008460 5.1e-60 235.0 193 63.2
Sed0016797 Sechium edule HOM05D006789 ORTHO05D008460 6.6e-60 234.6 176 69.3
AT5G04910 Arabidopsis thaliana HOM05D006789 ORTHO05D008460 1.1e-59 233.8 179 65.4
AL6G14600 Arabidopsis lyrata HOM05D006789 ORTHO05D008460 1.9e-59 233.0 179 65.4
COL.COLO4_28906 Corchorus olitorius HOM05D006789 ORTHO05D008460 3.3e-59 232.3 153 76.5
C09p71840 Brassica napus HOM05D006789 ORTHO05D008460 5.6e-59 231.5 179 64.8
Zm00001eb128210 Zea mays HOM05D006789 ORTHO05D008460 5.6e-59 231.5 184 66.3
Gorai.010G208300 Gossypium raimondii HOM05D006789 ORTHO05D008460 2.1e-58 229.6 155 74.8
PSO384G0303 Papaver somniferum HOM05D006789 ORTHO05D008460 2.1e-58 229.6 183 65.0
Gorai.N006000 Gossypium raimondii HOM05D006789 ORTHO05D008460 3.6e-58 228.8 152 75.7
CSS0000309 Camellia sinensis var. sinensis HOM05D006789 ORTHO05D008460 2.0e-56 223.0 262 50.0
MBI05_g14944_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 1.7e-55 219.9 158 69.6
Aa31LG11G5790 Aethionema arabicum HOM05D006789 ORTHO05D008460 4.9e-55 218.4 179 62.0
MBI06_g23363_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 8.4e-55 217.6 147 73.5
Gohir.A06G170906 Gossypium hirsutum HOM05D006789 ORTHO05D008460 9.2e-54 214.2 146 74.7
Lj7C491T7 Lonicera japonica HOM05D006789 ORTHO05D008460 1.2e-53 213.8 141 76.6
Nitab4.5_0004033g0070 Nicotiana tabacum HOM05D006789 ORTHO05D008460 3.5e-53 212.2 153 71.2
Hma1.2p1_0892F.1_g233220 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 6.0e-53 211.5 143 74.1
Cc02_g32010 Coffea canephora HOM05D006789 ORTHO05D008460 1.0e-52 210.7 154 68.2
FAN03G1759 Fragaria x ananassa HOM05D006789 ORTHO05D008460 1.0e-52 210.7 182 64.3
Gohir.D06G178832 Gossypium hirsutum HOM05D006789 ORTHO05D008460 1.3e-52 210.3 155 70.3
ATR0068G087 Amborella trichopoda HOM05D006789 ORTHO05D008460 1.7e-52 209.9 147 71.4
Migut.N01877 Erythranthe guttata HOM05D006789 ORTHO05D008460 5.1e-52 208.4 192 61.5
Nitab4.5_0002156g0010 Nicotiana tabacum HOM05D006789 ORTHO05D008460 2.5e-51 206.1 155 69.0
Sed0010043 Sechium edule HOM05D006789 ORTHO05D008460 5.6e-51 204.9 193 58.0
SEGI_32817 Sequoiadendron giganteum HOM05D006789 ORTHO05D008460 2.4e-49 199.5 148 65.5
Carub.0010s0003 Capsella rubella HOM05D006789 ORTHO05D008460 9.0e-49 197.6 156 64.7
FAN01G0280 Fragaria x ananassa HOM05D006789 ORTHO05D008460 5.4e-46 188.3 191 57.6
unitig_26.g9495 Utricularia gibba HOM05D006789 ORTHO05D008460 9.3e-46 187.6 187 54.5
AUR62014306 Chenopodium quinoa HOM05D006789 ORTHO05D008460 1.3e-39 167.2 182 51.1
Psat5g230200 Pisum sativum HOM05D006789 ORTHO05D008460 2.9e-39 166.0 118 72.9
Actinidia29655 Actinidia chinensis HOM05D006789 ORTHO05D008460 1.9e-35 153.3 180 53.9
Pp3c10_8520 Physcomitrium patens HOM05D006789 ORTHO05D008460 2.1e-34 149.8 167 48.5
Cfa010449 Carpinus fangiana HOM05D006789 ORTHO05D008460 3.8e-31 139.0 94 76.6
Gorai.010G208600 Gossypium raimondii HOM05D006789 ORTHO05D008460 4.9e-31 138.7 142 57.7
Mapoly0023s0087 Marchantia polymorpha HOM05D006789 ORTHO05D008460 1.1e-30 137.5 190 43.2
SMO364G0543 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 6.0e-29 131.7 177 44.6
TAR633G1630 Trochodendron aralioides HOM05D006789 ORTHO05D008460 1.0e-28 131.0 86 77.9
TAR629G1007 Trochodendron aralioides HOM05D001508 ORTHO05D008460 2.3e-28 129.8 85 75.3
CARHR208350 Cardamine hirsuta HOM05D006789 ORTHO05D008460 3.0e-28 129.4 86 72.1
Ca_14025_v3 Cicer arietinum L. HOM05D006789 ORTHO05D008460 1.1e-27 127.5 101 63.4
SMO353G0288 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 7.6e-24 114.8 171 42.1
TAR636G3403 Trochodendron aralioides HOM05D006789 ORTHO05D008460 1.9e-22 110.2 72 77.8
Cfa005731 Carpinus fangiana HOM05D012552 ORTHO05D018926 6.7e-20 101.7 91 61.5
Cfa006091 Carpinus fangiana HOM05D006789 ORTHO05D008460 2.5e-19 99.8 111 54.1
BcaB03g15210 Brassica carinata HOM05D006789 ORTHO05D008460 9.0e-17 91.3 65 64.6
Phvul.005G010900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 7.7e-16 88.2 99 52.5
CBR_g54451 Chara braunii HOM05D003248 ORTHO05D000301 2.9e-15 86.3 231 28.6
AUR62034099 Chenopodium quinoa HOM05D006789 ORTHO05D008460 1.1e-14 84.3 86 52.3
SHI21242 Sapria himalayana HOM05D006789 ORTHO05D008460 2.0e-11 73.6 63 58.7
Cfa010304 Carpinus fangiana HOM05D012552 ORTHO05D018926 2.2e-10 70.1 94 51.1
Cre16.g683483 Chlamydomonas reinhardtii HOM05D006789 ORTHO05D008460 4.5e-08 62.4 95 37.9
SHI05402 Sapria himalayana HOM05D005149 ORTHO05D006251 5.0e-07 58.9 63 49.2
MCO03G486 Micromonas commoda HOM05D006789 ORTHO05D008460 1.4e-06 57.4 97 40.2


User provided reference genes

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