Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g14734 Nelumbo nucifera HOM05D006576 ORTHO05D008644 1.5e-62 242.7 118 100.0
Nn7g38200 Nelumbo nucifera HOM05D006576 ORTHO05D008644 4.0e-36 154.8 72 98.6
Actinidia15312 Actinidia chinensis HOM05D006576 ORTHO05D008644 1.6e-29 132.9 73 84.9
Cpa.g.sc64.67 Carica papaya HOM05D006576 ORTHO05D008644 2.1e-29 132.5 90 74.4
ClCG05G019150 Citrullus lanatus HOM05D006576 ORTHO05D008644 2.8e-29 132.1 73 84.9
Haze_17991 Corylus avellana HOM05D006576 ORTHO05D008644 4.7e-29 131.3 72 86.1
TWI36G0276 Tripterygium wilfordii HOM05D006576 ORTHO05D008644 4.7e-29 131.3 90 73.3
CsaV3_3G044990 Cucumis sativus L. HOM05D006576 ORTHO05D008644 6.2e-29 131.0 73 83.6
Rhsim06G0035200 Rhododendron simsii HOM05D006576 ORTHO05D008644 6.2e-29 131.0 90 72.2
TWI12G0537 Tripterygium wilfordii HOM05D006576 ORTHO05D008644 6.2e-29 131.0 90 72.2
arahy.Tifrunner.gnm1.ann1.G51JN1 Arachis hypogaea HOM05D006576 ORTHO05D008644 8.1e-29 130.6 90 71.1
arahy.Tifrunner.gnm1.ann1.N2LUF1 Arachis hypogaea HOM05D006576 ORTHO05D008644 8.1e-29 130.6 90 71.1
ECA247G3618 Erigeron canadensis HOM05D006576 ORTHO05D008644 8.1e-29 130.6 73 82.2
MD08G1033200 Malus domestica HOM05D006576 ORTHO05D008644 8.1e-29 130.6 73 84.9
MD15G1029800 Malus domestica HOM05D006576 ORTHO05D008644 8.1e-29 130.6 73 84.9
Sed0024937 Sechium edule HOM05D006576 ORTHO05D008644 8.1e-29 130.6 73 83.6
CSS0022363 Camellia sinensis var. sinensis HOM05D006576 ORTHO05D008644 1.1e-28 130.2 90 72.2
MELO3C003867.2 Cucumis melo HOM05D006576 ORTHO05D008644 1.1e-28 130.2 73 83.6
DCAR_019521 Daucus carota HOM05D006576 ORTHO05D008644 1.1e-28 130.2 73 83.6
Hma1.2p1_0203F.1_g086540 Hydrangea macrophylla HOM05D006576 ORTHO05D008644 1.1e-28 130.2 90 72.2
QL02p007885 Quercus lobata HOM05D006576 ORTHO05D008644 1.1e-28 130.2 72 84.7
vmacro21626 Vaccinium macrocarpon HOM05D006576 ORTHO05D008644 1.1e-28 130.2 73 82.2
CiPaw.16G055000 Carya illinoinensis HOM05D006576 ORTHO05D008644 1.8e-28 129.4 72 84.7
Lsat_1_v5_gn_1_17900 Lactuca sativa HOM05D006576 ORTHO05D008644 1.8e-28 129.4 73 80.8
PGR083G0445 Punica granatum HOM05D006576 ORTHO05D008644 1.8e-28 129.4 90 68.9
Glyma.06G033200 Glycine max HOM05D006576 ORTHO05D008644 2.4e-28 129.0 73 80.8
Lalb_Chr11g0062371 Lupinus albus HOM05D006576 ORTHO05D008644 2.4e-28 129.0 73 80.8
VMungo1309G2241 Vigna mungo HOM05D006576 ORTHO05D008644 2.4e-28 129.0 73 80.8
Ciclev10003149m.g Citrus clementina HOM05D006576 ORTHO05D008644 3.1e-28 128.6 73 83.6
RcHm_v2.0_Chr6g0300731 Rosa chinensis HOM05D006576 ORTHO05D008644 3.1e-28 128.6 86 76.7
TAR381G1568 Trochodendron aralioides HOM05D006576 ORTHO05D008644 3.1e-28 128.6 73 86.3
CSS0029857 Camellia sinensis var. sinensis HOM05D006576 ORTHO05D008644 4.0e-28 128.3 70 85.7
Thecc.08G024000 Theobroma cacao HOM05D006576 ORTHO05D008644 4.0e-28 128.3 90 72.2
ATR0733G192 Amborella trichopoda HOM05D006576 ORTHO05D008644 5.2e-28 127.9 90 71.1
Aqoxy6G01046 Aquilegia oxysepala HOM05D006576 ORTHO05D008644 5.2e-28 127.9 90 73.3
Glyma.04G033200 Glycine max HOM05D006576 ORTHO05D008644 5.2e-28 127.9 112 59.8
Phvul.009G056900 Phaseolus vulgaris HOM05D006576 ORTHO05D008644 5.2e-28 127.9 73 80.8
Ah.05g167470 Amaranthus hybridus HOM05D006576 ORTHO05D008644 6.9e-28 127.5 90 67.8
FvH4_2g40020 Fragaria vesca HOM05D006576 ORTHO05D008644 6.9e-28 127.5 73 82.2
FAN20G0603 Fragaria x ananassa HOM05D006576 ORTHO05D008644 6.9e-28 127.5 73 82.2
FAN27G3021 Fragaria x ananassa HOM05D006576 ORTHO05D008644 6.9e-28 127.5 73 82.2
Gorai.002G129100 Gossypium raimondii HOM05D006576 ORTHO05D008644 6.9e-28 127.5 90 72.2
HanXRQChr04g0105541 Helianthus annuus HOM05D006576 ORTHO05D008644 6.9e-28 127.5 73 80.8
Lj1g0002309 Lotus japonicus HOM05D006576 ORTHO05D008644 6.9e-28 127.5 73 79.5
CANSAT25G2025 Cannabis sativa HOM05D006576 ORTHO05D008644 8.9e-28 127.1 73 82.2
Sabra14G0140900 Salix brachista HOM05D006576 ORTHO05D008644 8.9e-28 127.1 72 83.3
THA.LOC104822840 Tarenaya hassleriana HOM05D006576 ORTHO05D008644 8.9e-28 127.1 90 71.1
Manes.11G048300 Manihot esculenta HOM05D006576 ORTHO05D008644 1.2e-27 126.7 73 82.2
Nitab4.5_0000110g0470 Nicotiana tabacum HOM05D006576 ORTHO05D008644 1.2e-27 126.7 73 80.8
Nitab4.5_0012039g0010 Nicotiana tabacum HOM05D006576 ORTHO05D008644 1.2e-27 126.7 73 80.8
Peaxi162Scf00690g00125 Petunia axillaris HOM05D006576 ORTHO05D008644 1.2e-27 126.7 73 80.8
Nn1g05071 Nelumbo nucifera HOM05D006576 ORTHO05D008644 1.5e-27 126.3 73 84.9
GSVIVG01009681001 Vitis vinifera HOM05D006576 ORTHO05D008644 1.5e-27 126.3 90 68.9
Gohir.A01G116700 Gossypium hirsutum HOM05D006576 ORTHO05D008644 2.0e-27 125.9 90 71.1
Gohir.D01G105100 Gossypium hirsutum HOM05D006576 ORTHO05D008644 2.0e-27 125.9 90 71.1
CAN.G1126.39 Capsicum annuum HOM05D006576 ORTHO05D008644 2.6e-27 125.6 73 79.5
CARHR036240 Cardamine hirsuta HOM05D006576 ORTHO05D008644 2.6e-27 125.6 90 70.0
Potri.014G180700 Populus trichocarpa HOM05D006576 ORTHO05D008644 2.6e-27 125.6 72 81.9
Solyc04g080140.4 Solanum lycopersicum HOM05D006576 ORTHO05D008644 2.6e-27 125.6 90 68.9
Sopen04g033720 Solanum pennellii HOM05D006576 ORTHO05D008644 2.6e-27 125.6 90 68.9
AUR62033848 Chenopodium quinoa HOM05D006576 ORTHO05D008644 3.4e-27 125.2 90 66.7
AUR62041680 Chenopodium quinoa HOM05D006576 ORTHO05D008644 3.4e-27 125.2 90 66.7
Migut.C00705 Erythranthe guttata HOM05D006576 ORTHO05D008644 3.4e-27 125.2 90 66.7
PSO675G1390 Papaver somniferum HOM05D006576 ORTHO05D008644 3.4e-27 125.2 73 82.2
Sp1g33910 Schrenkiella parvula HOM05D006576 ORTHO05D008644 3.4e-27 125.2 90 68.9
SEGI_38008 Sequoiadendron giganteum HOM05D006576 ORTHO05D008644 3.4e-27 125.2 90 71.1
BcaB04g17577 Brassica carinata HOM05D006576 ORTHO05D008644 4.4e-27 124.8 90 68.9
BcaC07g37274 Brassica carinata HOM05D006576 ORTHO05D008644 4.4e-27 124.8 90 68.9
A08p06220 Brassica napus HOM05D006576 ORTHO05D008644 4.4e-27 124.8 90 68.9
C08p07030 Brassica napus HOM05D006576 ORTHO05D008644 4.4e-27 124.8 90 68.9
BolC8t47545H Brassica oleracea HOM05D006576 ORTHO05D008644 4.4e-27 124.8 90 68.9
Thhalv10011304m.g Eutrema salsugineum HOM05D006576 ORTHO05D008644 4.4e-27 124.8 90 68.9
BraA08t32625Z Brassica rapa HOM05D006576 ORTHO05D008644 5.8e-27 124.4 90 68.9
Zm00001eb107720 Zea mays HOM05D006576 ORTHO05D008644 5.8e-27 124.4 90 67.8
Atru.BG.235.p Acer truncatum HOM05D006576 ORTHO05D008644 7.6e-27 124.0 90 72.2
MSTRG.25158 Avicennia marina HOM05D006576 ORTHO05D008644 7.6e-27 124.0 73 78.1
Cc10_g03100 Coffea canephora HOM05D006576 ORTHO05D008644 7.6e-27 124.0 73 78.1
Os07g0581300 Oryza sativa ssp. japonica HOM05D006576 ORTHO05D008644 7.6e-27 124.0 90 67.8
AT1G45150 Arabidopsis thaliana HOM05D006576 ORTHO05D008644 9.9e-27 123.6 90 67.8
Carub.0001s3555 Capsella rubella HOM05D006576 ORTHO05D008644 9.9e-27 123.6 90 67.8
AL1G52790 Arabidopsis lyrata HOM05D006576 ORTHO05D008644 1.3e-26 123.2 90 67.8
Hund26593 Selenicereus undatus HOM05D006576 ORTHO05D008644 1.3e-26 123.2 90 65.6
EL10Ac1g01831 Beta vulgaris HOM05D006576 ORTHO05D008644 1.7e-26 122.9 73 75.3
SGA_v2.0_scaffold24G10239 Striga asiatica HOM05D006576 ORTHO05D008644 1.7e-26 122.9 90 66.7
SalBow7G4023 Salvia bowleyana HOM05D006576 ORTHO05D008644 2.2e-26 122.5 73 76.7
PSO541G0394 Papaver somniferum HOM05D006576 ORTHO05D008644 2.9e-26 122.1 73 80.8
FAN15G1632 Fragaria x ananassa HOM05D006576 ORTHO05D008644 4.9e-26 121.3 78 76.9
Ca_15522_v3 Cicer arietinum L. HOM05D006576 ORTHO05D008644 8.4e-26 120.6 73 78.1
Medtr3g111730 Medicago truncatula HOM05D006576 ORTHO05D008644 8.4e-26 120.6 73 78.1
Psat0s4808g0040 Pisum sativum HOM05D006576 ORTHO05D008644 1.3e-23 113.2 71 76.1
Pp3c21_15170 Physcomitrium patens HOM05D006576 ORTHO05D008644 1.7e-23 112.8 91 64.8
Mapoly0015s0075 Marchantia polymorpha HOM05D006576 ORTHO05D008644 6.6e-23 110.9 74 70.3
CBR_g55233 Chara braunii HOM05D006576 ORTHO05D008644 1.1e-22 110.2 72 75.0
SMO367G0262 Selaginella moellendorffii HOM05D006576 ORTHO05D008644 3.3e-22 108.6 74 67.6
Lj4A42T76 Lonicera japonica HOM05D006576 ORTHO05D008644 5.6e-22 107.8 88 61.4
Duzib093G2111 Durio zibethinus HOM05D006576 ORTHO05D008644 1.7e-18 96.3 73 64.4
Eucgr.F01554 Eucalyptus grandis HOM05D006576 ORTHO05D008644 2.9e-18 95.5 90 56.7
Atru.chr13.516 Acer truncatum HOM05D006576 ORTHO05D008644 1.4e-17 93.2 47 87.2
Prupe.1G381700 Prunus persica HOM05D006576 ORTHO05D008644 1.9e-17 92.8 73 61.6
COL.COLO4_26345 Corchorus olitorius HOM05D006576 ORTHO05D008644 1.8e-15 86.3 90 51.1
CDE04G1970 Ceratophyllum demersum HOM05D006576 ORTHO05D008644 2.1e-13 79.3 73 52.1
Sc02g0006340 Simmondsia chinensis HOM05D006576 ORTHO05D008644 4.6e-08 61.6 30 83.3
unitig_578.g16727 Utricularia gibba HOM05D006576 ORTHO05D008644 2.3e-07 59.3 30 80.0


User provided reference genes

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