Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g14624 Nelumbo nucifera HOM05D005892 ORTHO05D007364 5.1e-210 734.2 378 100.0
TAR633G2239 Trochodendron aralioides HOM05D005892 ORTHO05D007364 9.8e-153 543.9 364 77.2
GSVIVG01029940001 Vitis vinifera HOM05D005892 ORTHO05D007364 2.7e-142 509.2 364 72.5
CSS0032108 Camellia sinensis var. sinensis HOM05D005892 ORTHO05D007364 3.5e-142 508.8 364 71.7
Manes.08G033200 Manihot esculenta HOM05D005892 ORTHO05D007364 3.9e-141 505.4 363 73.8
PSO339G5192 Papaver somniferum HOM05D005892 ORTHO05D007364 1.2e-139 500.4 367 71.1
Lj3A860G48 Lonicera japonica HOM05D005892 ORTHO05D007364 3.6e-139 498.8 365 71.2
Cfa020027 Carpinus fangiana HOM05D005892 ORTHO05D007364 2.3e-138 496.1 341 73.9
Ciclev10011749m.g Citrus clementina HOM05D005892 ORTHO05D007364 4.0e-138 495.4 357 72.0
PSO384G1009 Papaver somniferum HOM05D005892 ORTHO05D007364 5.2e-138 495.0 367 70.6
Actinidia12433 Actinidia chinensis HOM05D005892 ORTHO05D007364 2.0e-137 493.0 379 69.4
Prupe.7G094800 Prunus persica HOM05D005892 ORTHO05D007364 6.4e-136 488.0 363 70.0
CiPaw.10G017200 Carya illinoinensis HOM05D005892 ORTHO05D007364 1.1e-135 487.3 348 72.1
RcHm_v2.0_Chr3g0475881 Rosa chinensis HOM05D005892 ORTHO05D007364 1.6e-134 483.4 342 71.6
FvH4_6g20290 Fragaria vesca HOM05D005892 ORTHO05D007364 4.6e-134 481.9 342 71.1
FAN14G3222 Fragaria x ananassa HOM05D005892 ORTHO05D007364 4.6e-134 481.9 342 71.1
FAN05G3301 Fragaria x ananassa HOM05D005892 ORTHO05D007364 7.8e-134 481.1 342 70.8
Hma1.2p1_1525F.1_g288970 Hydrangea macrophylla HOM05D005892 ORTHO05D007364 1.3e-133 480.3 343 71.4
Atru.chr8.1369 Acer truncatum HOM05D005892 ORTHO05D007364 7.3e-132 474.6 348 69.8
Thecc.05G104100 Theobroma cacao HOM05D005892 ORTHO05D007364 4.7e-131 471.9 342 71.3
PGR142G3547 Punica granatum HOM05D005892 ORTHO05D007364 4.0e-130 468.8 363 66.7
COL.COLO4_29579 Corchorus olitorius HOM05D005892 ORTHO05D007364 1.2e-129 467.2 341 70.7
Potri.016G070700 Populus trichocarpa HOM05D005892 ORTHO05D007364 1.7e-128 463.4 341 69.8
Peaxi162Scf01139g00002 Petunia axillaris HOM05D005892 ORTHO05D007364 3.8e-128 462.2 364 66.8
Gohir.A01G201600 Gossypium hirsutum HOM05D005892 ORTHO05D007364 4.9e-128 461.8 339 69.9
Duzib093G2092 Durio zibethinus HOM05D005892 ORTHO05D007364 1.1e-127 460.7 339 70.8
Nitab4.5_0007165g0010 Nicotiana tabacum HOM05D005892 ORTHO05D007364 4.2e-127 458.8 363 65.8
Eucgr.K02619 Eucalyptus grandis HOM05D005892 ORTHO05D007364 5.4e-127 458.4 383 65.0
Gorai.002G235400 Gossypium raimondii HOM05D005892 ORTHO05D007364 7.1e-127 458.0 339 69.3
Nitab4.5_0005476g0010 Nicotiana tabacum HOM05D005892 ORTHO05D007364 7.1e-127 458.0 363 65.8
Gohir.D01G191500 Gossypium hirsutum HOM05D005892 ORTHO05D007364 1.6e-126 456.8 339 69.3
Cpa.g.sc35.59 Carica papaya HOM05D005892 ORTHO05D007364 3.5e-126 455.7 363 66.1
CDE02G2672 Ceratophyllum demersum HOM05D005892 ORTHO05D007364 2.3e-125 453.0 347 67.7
MD14G1038600 Malus domestica HOM05D005892 ORTHO05D007364 3.9e-125 452.2 354 66.7
QL07p036776 Quercus lobata HOM05D005892 ORTHO05D007364 5.1e-125 451.8 397 61.2
TAR633G0738 Trochodendron aralioides HOM05D005892 ORTHO05D007364 2.5e-124 449.5 307 77.5
DCAR_026818 Daucus carota HOM05D005892 ORTHO05D007364 5.6e-124 448.4 365 64.9
Aqoxy1G00010 Aquilegia oxysepala HOM05D005892 ORTHO05D007364 7.3e-124 448.0 370 63.8
Rhsim09G0086500 Rhododendron simsii HOM05D005892 ORTHO05D007364 7.3e-124 448.0 364 65.7
FAN09G4751 Fragaria x ananassa HOM05D005892 ORTHO05D007364 1.3e-123 447.2 328 69.5
PGSC0003DMG400006864 Solanum tuberosum HOM05D005892 ORTHO05D007364 2.8e-123 446.0 346 67.3
Cc11_g05910 Coffea canephora HOM05D005892 ORTHO05D007364 6.2e-123 444.9 369 66.9
Sabra16G0070800 Salix brachista HOM05D005892 ORTHO05D007364 6.9e-122 441.4 415 59.3
Glyma.19G026300 Glycine max HOM05D005892 ORTHO05D007364 9.0e-122 441.0 343 66.2
Glyma.03G201900 Glycine max HOM05D005892 ORTHO05D007364 1.2e-121 440.7 345 65.2
Phvul.001G195400 Phaseolus vulgaris HOM05D005892 ORTHO05D007364 9.9e-121 437.6 343 66.2
Sopen01g034280 Solanum pennellii HOM05D005892 ORTHO05D007364 2.2e-120 436.4 365 64.4
Medtr7g106200 Medicago truncatula HOM05D005892 ORTHO05D007364 4.9e-120 435.3 367 62.9
arahy.Tifrunner.gnm1.ann1.EHSJ8W Arachis hypogaea HOM05D005892 ORTHO05D007364 6.4e-120 434.9 342 65.5
Ca_25808_v3 Cicer arietinum L. HOM05D005892 ORTHO05D007364 1.9e-119 433.3 368 62.0
MBI19_g09306_MAGBIO Magnolia biondii HOM05D005892 ORTHO05D007364 1.9e-119 433.3 368 66.8
ClCG10G018360 Citrullus lanatus HOM05D005892 ORTHO05D007364 3.2e-119 432.6 374 61.8
Sed0021278 Sechium edule HOM05D005892 ORTHO05D007364 7.1e-119 431.4 366 63.7
Solyc01g087230.3 Solanum lycopersicum HOM05D005892 ORTHO05D007364 9.3e-119 431.0 365 63.8
CsaV3_3G037930 Cucumis sativus L. HOM05D005892 ORTHO05D007364 1.2e-118 430.6 362 63.0
Lalb_Chr20g0111381 Lupinus albus HOM05D005892 ORTHO05D007364 1.6e-118 430.3 368 60.1
MSTRG.13644 Avicennia marina HOM05D005892 ORTHO05D007364 3.5e-118 429.1 357 64.1
THA.LOC104816617 Tarenaya hassleriana HOM05D005892 ORTHO05D007364 3.5e-118 429.1 360 63.9
Lj1g0008745 Lotus japonicus HOM05D005892 ORTHO05D007364 1.5e-116 423.7 369 62.3
HanXRQChr16g0527301 Helianthus annuus HOM05D005892 ORTHO05D007364 1.9e-116 423.3 346 67.3
Psat3g029200 Pisum sativum HOM05D005892 ORTHO05D007364 2.5e-116 422.9 344 63.4
AL3G20290 Arabidopsis lyrata HOM05D005892 ORTHO05D007364 4.3e-116 422.2 343 63.8
HPP92_001347 Vanilla planifolia HOM05D005892 ORTHO05D007364 7.4e-116 421.4 357 63.3
HPP92_001371 Vanilla planifolia HOM05D005892 ORTHO05D007364 7.4e-116 421.4 357 63.3
ECA234G1824 Erigeron canadensis HOM05D005892 ORTHO05D007364 1.6e-115 420.2 339 65.2
Lsat_1_v5_gn_4_22820 Lactuca sativa HOM05D005892 ORTHO05D007364 1.6e-115 420.2 371 62.3
AT3G09180 Arabidopsis thaliana HOM05D005892 ORTHO05D007364 2.8e-115 419.5 350 62.3
CARHR083520 Cardamine hirsuta HOM05D005892 ORTHO05D007364 4.0e-114 415.6 343 63.3
Carub.0003s0830 Capsella rubella HOM05D005892 ORTHO05D007364 9.0e-114 414.5 343 62.1
Sp3g07480 Schrenkiella parvula HOM05D005892 ORTHO05D007364 1.2e-113 414.1 348 62.6
MELO3C009537.2 Cucumis melo HOM05D005892 ORTHO05D007364 1.5e-113 413.7 404 56.9
Migut.E00525 Erythranthe guttata HOM05D005892 ORTHO05D007364 2.0e-113 413.3 343 65.0
Thhalv10020833m.g Eutrema salsugineum HOM05D005892 ORTHO05D007364 2.6e-113 412.9 345 62.6
BolC5t34536H Brassica oleracea HOM05D005892 ORTHO05D007364 5.8e-113 411.8 345 62.0
Haze_20187 Corylus avellana HOM05D005892 ORTHO05D007364 7.6e-113 411.4 360 63.9
C05p58840 Brassica napus HOM05D005892 ORTHO05D007364 1.7e-112 410.2 345 61.7
BraA05t22764Z Brassica rapa HOM05D005892 ORTHO05D007364 8.4e-112 407.9 362 59.9
VMungo1383G1945 Vigna mungo HOM05D005892 ORTHO05D007364 1.1e-111 407.5 343 62.4
A05p39800 Brassica napus HOM05D005892 ORTHO05D007364 1.9e-111 406.8 363 60.1
BraA03t12793Z Brassica rapa HOM05D005892 ORTHO05D007364 2.4e-111 406.4 346 61.3
Hund10710 Selenicereus undatus HOM05D005892 ORTHO05D007364 2.4e-111 406.4 329 66.3
BolC3t16654H Brassica oleracea HOM05D005892 ORTHO05D007364 3.2e-111 406.0 354 60.5
Os01g0263500 Oryza sativa ssp. japonica HOM05D005892 ORTHO05D007364 1.2e-110 404.1 345 61.2
BcaC01g06891 Brassica carinata HOM05D005892 ORTHO05D007364 2.1e-110 403.3 353 60.3
C03p43860 Brassica napus HOM05D005892 ORTHO05D007364 4.6e-110 402.1 353 60.1
Zm00001eb156320 Zea mays HOM05D005892 ORTHO05D007364 4.6e-110 402.1 370 60.5
FAN05G1366 Fragaria x ananassa HOM05D005892 ORTHO05D007364 2.3e-109 399.8 373 60.3
A03p36220 Brassica napus HOM05D005892 ORTHO05D007364 2.5e-108 396.4 346 60.4
AUR62036522 Chenopodium quinoa HOM05D005892 ORTHO05D007364 5.6e-108 395.2 357 59.4
HPP92_001441 Vanilla planifolia HOM05D005892 ORTHO05D007364 5.6e-108 395.2 357 60.2
CAN.G219.4 Capsicum annuum HOM05D005892 ORTHO05D007364 9.6e-108 394.4 300 67.0
AUR62042262 Chenopodium quinoa HOM05D005892 ORTHO05D007364 2.1e-107 393.3 331 61.9
SalBow2G2452 Salvia bowleyana HOM05D005892 ORTHO05D007364 8.1e-107 391.3 366 59.8
EL10Ac9g21147 Beta vulgaris HOM05D005892 ORTHO05D007364 2.4e-106 389.8 374 56.4
Aa31LG3G1670 Aethionema arabicum HOM05D005892 ORTHO05D007364 4.0e-106 389.0 327 61.8
arahy.Tifrunner.gnm1.ann1.PAXQ04 Arachis hypogaea HOM05D005892 ORTHO05D007364 2.0e-105 386.7 305 66.6
Ah.10g030320 Amaranthus hybridus HOM05D005892 ORTHO05D007364 2.6e-105 386.3 344 61.3
FAN05G3684 Fragaria x ananassa HOM05D005892 ORTHO05D007364 2.2e-104 383.3 285 69.1
CDE04G0639 Ceratophyllum demersum HOM05D005892 ORTHO05D007364 1.1e-103 380.9 346 60.7
Sabra16G0073000 Salix brachista HOM05D005892 ORTHO05D007364 9.3e-103 377.9 356 61.0
FAN05G0385 Fragaria x ananassa HOM05D005892 ORTHO05D007364 6.0e-102 375.2 285 68.4
TPR.G14083 Trifolium pratense HOM05D005892 ORTHO05D007364 1.8e-101 373.6 341 59.5
Hma1.2p1_1525F.1_g288980 Hydrangea macrophylla HOM05D005892 ORTHO05D007364 3.3e-100 369.4 272 69.5
Sc07g0007600 Simmondsia chinensis HOM05D005892 ORTHO05D007364 4.5e-97 359.0 319 61.8
SGA_v2.0_scaffold65G22109 Striga asiatica HOM05D005892 ORTHO05D007364 2.2e-96 356.7 359 57.4
unitig_52.g17290 Utricularia gibba HOM05D005892 ORTHO05D007364 7.9e-94 348.2 337 57.6
ATR0068G118 Amborella trichopoda HOM05D005892 ORTHO05D007364 5.9e-89 332.0 396 52.3
Zm00001eb348930 Zea mays HOM05D005892 ORTHO05D007364 7.2e-87 325.1 271 62.7
Nn2g14691 Nelumbo nucifera HOM05D005892 ORTHO05D007364 6.3e-75 285.4 148 100.0
BcaB04g18552 Brassica carinata HOM05D005892 ORTHO05D007364 1.7e-64 250.8 212 62.3
FAN02G1987 Fragaria x ananassa HOM05D005892 ORTHO05D007364 1.2e-60 238.0 314 49.0
RcHm_v2.0_Chr1g0331111 Rosa chinensis HOM05D005892 ORTHO05D007364 7.7e-57 225.3 128 88.3
Pp3c15_4850 Physcomitrium patens HOM05D005892 ORTHO05D007364 1.1e-55 221.5 388 39.7
RcHm_v2.0_Chr1g0331121 Rosa chinensis HOM05D005892 ORTHO05D007364 1.5e-52 211.1 155 63.2
Mapoly0090s0009 Marchantia polymorpha HOM05D005892 ORTHO05D007364 3.4e-52 209.9 377 37.9
Atru.chr9.699 Acer truncatum HOM05D005892 ORTHO05D007364 1.4e-45 188.0 124 75.0
Peaxi162Scf00684g00585 Petunia axillaris HOM05D005892 ORTHO05D007364 7.0e-42 175.6 268 43.7
AagrBONN_evm.TU.Sc2ySwM_228.2745 Anthoceros agrestis HOM05D005892 ORTHO05D007364 1.9e-39 167.5 375 33.3
Hma1.2p1_1525F.1_g288960 Hydrangea macrophylla HOM05D005892 ORTHO05D007364 4.6e-25 119.8 99 67.7
Atru.chr9.700 Acer truncatum HOM05D005892 ORTHO05D007364 6.0e-25 119.4 104 58.7
BcaC05g29638 Brassica carinata HOM05D005892 ORTHO05D007364 7.8e-25 119.0 94 64.9
CSS0000115 Camellia sinensis var. sinensis HOM05D005892 ORTHO05D007364 8.6e-24 115.5 103 64.1
HPP92_019993 Vanilla planifolia HOM05D002096 ORTHO05D002203 9.5e-23 112.1 154 44.2
Aa31sc80G50 Aethionema arabicum HOM05D005892 ORTHO05D007364 1.3e-19 101.7 97 59.8
SEGI_07863 Sequoiadendron giganteum HOM05D005892 ORTHO05D007364 4.2e-10 70.1 92 48.9
TPR.G35563 Trifolium pratense HOM05D005892 ORTHO05D007364 4.3e-07 60.1 40 60.0


User provided reference genes

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