Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g14602 Nelumbo nucifera HOM05D000147 ORTHO05D275303 1.4e-75 286.2 147 100.0
Rhsim08G0218100 Rhododendron simsii HOM05D000147 ORTHO05D004360 1.7e-07 60.1 38 81.6
Potri.001G176900 Populus trichocarpa HOM05D000147 ORTHO05D004360 1.1e-06 57.4 32 87.5
Actinidia01786 Actinidia chinensis HOM05D000147 ORTHO05D004360 1.9e-06 56.6 32 87.5
CSS0004467 Camellia sinensis var. sinensis HOM05D000147 ORTHO05D004360 1.9e-06 56.6 32 87.5
Glyma.13G361600 Glycine max HOM05D000147 ORTHO05D004360 1.9e-06 56.6 32 87.5
Glyma.15G012200 Glycine max HOM05D000147 ORTHO05D004360 1.9e-06 56.6 32 87.5
MBI04_g11927_MAGBIO Magnolia biondii HOM05D000147 ORTHO05D004360 1.9e-06 56.6 32 87.5
MBI04_g46561_MAGBIO Magnolia biondii HOM05D000147 ORTHO05D004360 1.9e-06 56.6 32 87.5
Nn8g39303 Nelumbo nucifera HOM05D000147 ORTHO05D004360 1.9e-06 56.6 32 87.5
Sc12g0009090 Simmondsia chinensis HOM05D000147 ORTHO05D004360 1.9e-06 56.6 32 87.5
vmacro18940 Vaccinium macrocarpon HOM05D000147 ORTHO05D004360 1.9e-06 56.6 32 87.5
vmacro16937 Vaccinium macrocarpon HOM05D000147 ORTHO05D004360 2.4e-06 56.2 32 87.5
ATR0083G056 Amborella trichopoda HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
MSTRG.11097 Avicennia marina HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
CANSAT56G2565 Cannabis sativa HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
Cpa.g.sc10.179 Carica papaya HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
Cfa002044 Carpinus fangiana HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
CiPaw.01G241300 Carya illinoinensis HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
CiPaw.02G153100 Carya illinoinensis HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
CDE04G0019 Ceratophyllum demersum HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
AUR62011601 Chenopodium quinoa HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
AUR62016416 Chenopodium quinoa HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
Ca_20415_v3 Cicer arietinum L. HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
ClCG09G002400 Citrullus lanatus HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
Haze_16467 Corylus avellana HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
MELO3C023374.2 Cucumis melo HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
CsaV3_7G032910 Cucumis sativus L. HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
Eucgr.J03017 Eucalyptus grandis HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
FvH4_6g30820 Fragaria vesca HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
FAN02G1850 Fragaria x ananassa HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
FAN05G5665 Fragaria x ananassa HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
FAN09G1335 Fragaria x ananassa HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
FAN14G2580 Fragaria x ananassa HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
Glyma.07G034000 Glycine max HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
Glyma.08G208100 Glycine max HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
Gohir.A02G123000 Gossypium hirsutum HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
Gohir.A09G084500 Gossypium hirsutum HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
Gohir.D03G073400 Gossypium hirsutum HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
Gohir.D09G084400 Gossypium hirsutum HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
Gorai.002G057900 Gossypium raimondii HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
Gorai.006G100400 Gossypium raimondii HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
Hma1.2p1_0682F.1_g202550 Hydrangea macrophylla HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
Lsat_1_v5_gn_5_129781 Lactuca sativa HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
Lj3g0024867 Lotus japonicus HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
Lalb_Chr14g0373581 Lupinus albus HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
Lalb_Chr22g0351121 Lupinus albus HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
Lalb_Chr24g0395701 Lupinus albus HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
Manes.04G120400 Manihot esculenta HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
Manes.11G050700 Manihot esculenta HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
Medtr4g011810 Medicago truncatula HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
Phvul.010G152000 Phaseolus vulgaris HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
Psat7g253560 Pisum sativum HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
Potri.003G057800 Populus trichocarpa HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
PGR004G0820 Punica granatum HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
QL05p025716 Quercus lobata HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
RcHm_v2.0_Chr2g0137251 Rosa chinensis HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
Sabra03G0033100 Salix brachista HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
Sed0025598 Sechium edule HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
Hund06595 Selenicereus undatus HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
SGA_v2.0_scaffold37G14801 Striga asiatica HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
SGA_v2.0_scaffold5G02632 Striga asiatica HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
Thecc.06G081400 Theobroma cacao HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
TPR.G27508 Trifolium pratense HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
TWI12G0075 Tripterygium wilfordii HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
TAR625G0920 Trochodendron aralioides HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
TAR626G1013 Trochodendron aralioides HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
VMungo0331G2008 Vigna mungo HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
GSVIVG01017172001 Vitis vinifera HOM05D000147 ORTHO05D004360 4.1e-06 55.5 32 84.4
Aqoxy7G01890 Aquilegia oxysepala HOM05D000147 ORTHO05D004360 5.4e-06 55.1 32 84.4
HPP92_007681 Vanilla planifolia HOM05D000147 ORTHO05D004360 5.4e-06 55.1 32 84.4
Actinidia08825 Actinidia chinensis HOM05D000147 ORTHO05D004360 9.2e-06 54.3 32 81.2
Ciclev10025365m.g Citrus clementina HOM05D000147 ORTHO05D004360 9.2e-06 54.3 32 81.2
Dinv30539 Davidia involucrata HOM05D000147 ORTHO05D004360 9.2e-06 54.3 56 58.9
ECA247G2508 Erigeron canadensis HOM05D000147 ORTHO05D004360 9.2e-06 54.3 32 81.2
HanXRQChr14g0456001 Helianthus annuus HOM05D000147 ORTHO05D004360 9.2e-06 54.3 32 81.2
Lsat_1_v5_gn_1_34101 Lactuca sativa HOM05D000147 ORTHO05D004360 9.2e-06 54.3 32 81.2
PSO063G0547 Papaver somniferum HOM05D000147 ORTHO05D004360 9.2e-06 54.3 32 81.2
PSO782G0745 Papaver somniferum HOM05D000147 ORTHO05D004360 9.2e-06 54.3 32 81.2
Phvul.005G173450 Phaseolus vulgaris HOM05D000147 ORTHO05D004360 9.2e-06 54.3 32 84.4
VMungo1080G1096 Vigna mungo HOM05D000147 ORTHO05D004360 9.2e-06 54.3 32 84.4


User provided reference genes

Program Settings