Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g14582 Nelumbo nucifera HOM05D001571 ORTHO05D002889 4.6e-15 83.2 37 100.0
Nn1g09451 Nelumbo nucifera HOM05D001571 ORTHO05D002889 9.1e-11 68.9 36 80.6
Nn1g00013 Nelumbo nucifera HOM05D001571 ORTHO05D002889 3.8e-09 63.5 31 83.9
Dinv17156 Davidia involucrata HOM05D001571 ORTHO05D002889 5.0e-09 63.2 33 81.8
Manes.12G000500 Manihot esculenta HOM05D001571 ORTHO05D002889 5.0e-09 63.2 33 81.8
Gohir.D01G111601 Gossypium hirsutum HOM05D001571 ORTHO05D002889 6.5e-09 62.8 33 78.8
Gorai.002G136400 Gossypium raimondii HOM05D001571 ORTHO05D002889 6.5e-09 62.8 33 78.8
Atru.chr10.130 Acer truncatum HOM05D001571 ORTHO05D002889 1.1e-08 62.0 34 76.5
Hma1.2p1_1218F.1_g267650 Hydrangea macrophylla HOM05D001571 ORTHO05D002889 1.1e-08 62.0 33 78.8
Sed0007647 Sechium edule HOM05D001571 ORTHO05D002889 1.1e-08 62.0 33 81.8
ATR0743G152 Amborella trichopoda HOM05D001571 ORTHO05D002889 1.4e-08 61.6 33 72.7
vmacro10421 Vaccinium macrocarpon HOM05D001571 ORTHO05D002889 1.4e-08 61.6 34 76.5
Atru.chr10.129 Acer truncatum HOM05D001571 ORTHO05D002889 1.9e-08 61.2 33 78.8
Atru.chr10.132 Acer truncatum HOM05D001571 ORTHO05D002889 1.9e-08 61.2 33 78.8
CiPaw.04G180500 Carya illinoinensis HOM05D001571 ORTHO05D002889 1.9e-08 61.2 33 75.8
Duzib128G1151 Durio zibethinus HOM05D001571 ORTHO05D002889 1.9e-08 61.2 33 75.8
Sed0014678 Sechium edule HOM05D001571 ORTHO05D002889 1.9e-08 61.2 33 81.8
Aqoxy1G01860 Aquilegia oxysepala HOM05D001571 ORTHO05D002889 2.5e-08 60.8 33 69.7
Cfa002310 Carpinus fangiana HOM05D001571 ORTHO05D002889 2.5e-08 60.8 33 78.8
MELO3C008768.2 Cucumis melo HOM05D001571 ORTHO05D002889 2.5e-08 60.8 33 81.8
CsaV3_2G009420 Cucumis sativus L. HOM05D001571 ORTHO05D002889 2.5e-08 60.8 33 81.8
Duzib128G1493 Durio zibethinus HOM05D001571 ORTHO05D002889 2.5e-08 60.8 33 72.7
QL01p051842 Quercus lobata HOM05D001571 ORTHO05D002889 2.5e-08 60.8 33 78.8
Zm00001eb288150 Zea mays HOM05D001571 ORTHO05D002889 3.2e-08 60.5 33 69.7
Thecc.05G131200 Theobroma cacao HOM05D001571 ORTHO05D002889 5.5e-08 59.7 33 75.8
Actinidia34704 Actinidia chinensis HOM05D001571 ORTHO05D002889 7.2e-08 59.3 33 75.8
Os05g0415700 Oryza sativa ssp. japonica HOM05D001571 ORTHO05D002889 7.2e-08 59.3 33 72.7
TAR636G2423 Trochodendron aralioides HOM05D001571 ORTHO05D002889 7.2e-08 59.3 33 75.8
COL.COLO4_22779 Corchorus olitorius HOM05D001571 ORTHO05D002889 9.4e-08 58.9 33 78.8
PSO675G5555 Papaver somniferum HOM05D001571 ORTHO05D002889 9.4e-08 58.9 33 75.8
PSO732G0537 Papaver somniferum HOM05D001571 ORTHO05D002889 9.4e-08 58.9 33 75.8
Nn7g37464 Nelumbo nucifera HOM05D001571 ORTHO05D002889 1.6e-07 58.2 33 72.7
CSS0030056 Camellia sinensis var. sinensis HOM05D001571 ORTHO05D002889 2.1e-07 57.8 34 70.6
Migut.F02077 Erythranthe guttata HOM05D001571 ORTHO05D002889 2.1e-07 57.8 33 72.7
Lj1A640T53 Lonicera japonica HOM05D001571 ORTHO05D002889 2.7e-07 57.4 35 68.6
CSS0003036 Camellia sinensis var. sinensis HOM05D001571 ORTHO05D002889 3.6e-07 57.0 33 69.7
Ciclev10014808m.g Citrus clementina HOM05D001571 ORTHO05D002889 3.6e-07 57.0 33 72.7
PSO732G0499 Papaver somniferum HOM05D001571 ORTHO05D002889 3.6e-07 57.0 33 75.8
TWI18G1160 Tripterygium wilfordii HOM05D001571 ORTHO05D002889 3.6e-07 57.0 33 75.8
CARHR057340 Cardamine hirsuta HOM05D001571 ORTHO05D002889 4.7e-07 56.6 33 69.7
Cc00_g25060 Coffea canephora HOM05D001571 ORTHO05D002889 4.7e-07 56.6 33 69.7
AL2G22550 Arabidopsis lyrata HOM05D001571 ORTHO05D002889 6.1e-07 56.2 33 69.7
AT1G65590 Arabidopsis thaliana HOM05D001571 ORTHO05D002889 6.1e-07 56.2 33 69.7
COL.COLO4_22777 Corchorus olitorius HOM05D001571 ORTHO05D002889 6.1e-07 56.2 33 72.7
CANSAT64G1883 Cannabis sativa HOM05D001571 ORTHO05D002889 7.9e-07 55.8 33 72.7
Lsat_1_v5_gn_2_108461 Lactuca sativa HOM05D001571 ORTHO05D002889 7.9e-07 55.8 33 69.7
Lj1C573G6 Lonicera japonica HOM05D001571 ORTHO05D002889 7.9e-07 55.8 33 66.7
SEGI_20989 Sequoiadendron giganteum HOM05D001571 ORTHO05D002889 7.9e-07 55.8 33 69.7
Rhsim09G0127900 Rhododendron simsii HOM05D001571 ORTHO05D002889 1.0e-06 55.5 34 67.6
RhsimUnG0108400 Rhododendron simsii HOM05D001571 ORTHO05D002889 1.0e-06 55.5 34 67.6
Carub.0002s1142 Capsella rubella HOM05D001571 ORTHO05D002889 1.4e-06 55.1 33 66.7
GSVIVG01006264001 Vitis vinifera HOM05D001571 ORTHO05D002889 1.8e-06 54.7 33 66.7
GSVIVG01006728001 Vitis vinifera HOM05D001571 ORTHO05D002889 1.8e-06 54.7 33 66.7
Thhalv10018379m.g Eutrema salsugineum HOM05D001571 ORTHO05D002889 2.3e-06 54.3 33 66.7
Sp5g20510 Schrenkiella parvula HOM05D001571 ORTHO05D002889 2.3e-06 54.3 33 66.7
Sc16g0010750 Simmondsia chinensis HOM05D001571 ORTHO05D002889 2.3e-06 54.3 33 69.7
BraA07t30916Z Brassica rapa HOM05D001571 ORTHO05D002889 3.0e-06 53.9 33 66.7
HanXRQChr14g0454971 Helianthus annuus HOM05D001571 ORTHO05D002889 3.0e-06 53.9 29 72.4
THA.LOC104805676 Tarenaya hassleriana HOM05D001571 ORTHO05D002889 3.0e-06 53.9 33 66.7
HPP92_011711 Vanilla planifolia HOM05D001571 ORTHO05D002889 3.0e-06 53.9 33 69.7
ECA238G4792 Erigeron canadensis HOM05D000915 ORTHO05D004661 3.9e-06 53.5 33 63.6
Potri.008G079400 Populus trichocarpa HOM05D001571 ORTHO05D002889 3.9e-06 53.5 33 69.7
Sabra08G0059100 Salix brachista HOM05D001571 ORTHO05D002889 3.9e-06 53.5 33 69.7
MSTRG.9233 Avicennia marina HOM05D001571 ORTHO05D002889 5.1e-06 53.1 33 63.6
Peaxi162Scf29894g00007 Petunia axillaris HOM05D001571 ORTHO05D002889 5.1e-06 53.1 33 66.7
RhsimUnG0038100 Rhododendron simsii HOM05D001571 ORTHO05D002889 5.1e-06 53.1 34 64.7
SalBow1G3071 Salvia bowleyana HOM05D001571 ORTHO05D002889 5.1e-06 53.1 33 66.7
SalBow1G6620 Salvia bowleyana HOM05D001571 ORTHO05D002889 5.1e-06 53.1 33 66.7
Nitab4.5_0001653g0030 Nicotiana tabacum HOM05D001571 ORTHO05D002889 6.7e-06 52.8 34 61.8
Hund07393 Selenicereus undatus HOM05D001571 ORTHO05D002889 6.7e-06 52.8 31 64.5
PGSC0003DMG400016240 Solanum tuberosum HOM05D001571 ORTHO05D002889 8.8e-06 52.4 33 63.6
TWI53G1043 Tripterygium wilfordii HOM05D001571 ORTHO05D002889 8.8e-06 52.4 33 66.7
unitig_0.g2811 Utricularia gibba HOM05D001571 ORTHO05D002889 8.8e-06 52.4 34 61.8


User provided reference genes

Program Settings