Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g14550 Nelumbo nucifera HOM05D006370 ORTHO05D008324 5.5e-90 334.3 175 100.0
TAR623G1163 Trochodendron aralioides HOM05D006370 ORTHO05D008324 1.2e-44 183.7 180 61.7
GSVIVG01022435001 Vitis vinifera HOM05D006370 ORTHO05D008324 5.6e-42 174.9 180 56.7
MD12G1010600 Malus domestica HOM05D006370 ORTHO05D008324 3.6e-41 172.2 162 60.5
Aqoxy1G00517 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 1.4e-40 170.2 175 54.9
Thecc.05G242700 Theobroma cacao HOM05D006370 ORTHO05D008324 8.9e-40 167.5 176 55.7
Cfa017718 Carpinus fangiana HOM05D006370 ORTHO05D008324 2.6e-39 166.0 161 60.9
PSO339G2906 Papaver somniferum HOM05D006370 ORTHO05D008324 9.8e-39 164.1 179 53.6
Hma1.2p1_0526F.1_g172840 Hydrangea macrophylla HOM05D006370 ORTHO05D008324 6.4e-38 161.4 170 56.5
Duzib177G0489 Durio zibethinus HOM05D006370 ORTHO05D008324 7.0e-37 157.9 173 53.8
PGR142G0714 Punica granatum HOM05D006370 ORTHO05D008324 7.0e-37 157.9 168 58.3
EL10Ac5g11708 Beta vulgaris HOM05D006370 ORTHO05D008324 2.0e-36 156.4 176 52.3
Gohir.D11G241500 Gossypium hirsutum HOM05D006370 ORTHO05D008324 3.5e-36 155.6 161 53.4
CiPaw.09G166900 Carya illinoinensis HOM05D006370 ORTHO05D008324 5.9e-36 154.8 164 57.9
Eucgr.K01533 Eucalyptus grandis HOM05D006370 ORTHO05D008324 5.9e-36 154.8 174 55.2
RcHm_v2.0_Chr3g0496161 Rosa chinensis HOM05D006370 ORTHO05D008324 7.8e-36 154.5 175 53.7
Duzib128G1808 Durio zibethinus HOM05D006370 ORTHO05D008324 1.0e-35 154.1 162 56.8
Gohir.A11G229500 Gossypium hirsutum HOM05D006370 ORTHO05D008324 1.3e-35 153.7 161 52.2
MD14G1007700 Malus domestica HOM05D006370 ORTHO05D008324 1.3e-35 153.7 149 59.7
Manes.09G136900 Manihot esculenta HOM05D006370 ORTHO05D008324 1.7e-35 153.3 156 56.4
Gorai.007G255600 Gossypium raimondii HOM05D006370 ORTHO05D008324 2.9e-35 152.5 161 52.2
Atru.chr2.1510 Acer truncatum HOM05D006370 ORTHO05D008324 3.9e-35 152.1 175 52.0
Eucgr.K01528 Eucalyptus grandis HOM05D006370 ORTHO05D008324 3.9e-35 152.1 173 54.3
Lj1A1073T41 Lonicera japonica HOM05D006370 ORTHO05D008324 5.0e-35 151.8 156 53.8
Cpa.g.sc161.33 Carica papaya HOM05D006370 ORTHO05D008324 6.6e-35 151.4 159 54.7
Ciclev10022640m.g Citrus clementina HOM05D006370 ORTHO05D008324 6.6e-35 151.4 157 58.0
COL.COLO4_28633 Corchorus olitorius HOM05D006370 ORTHO05D008324 6.6e-35 151.4 175 51.4
PSO063G0933 Papaver somniferum HOM05D006370 ORTHO05D008324 5.6e-34 148.3 177 52.0
Rhsim03G0049800 Rhododendron simsii HOM05D006370 ORTHO05D008324 5.6e-34 148.3 195 48.2
AUR62042155 Chenopodium quinoa HOM05D006370 ORTHO05D008324 1.6e-33 146.7 159 53.5
Potri.013G065200 Populus trichocarpa HOM05D006370 ORTHO05D008324 1.6e-33 146.7 175 47.4
vmacro07654 Vaccinium macrocarpon HOM05D006370 ORTHO05D008324 4.7e-33 145.2 156 55.8
CDE10G0775 Ceratophyllum demersum HOM05D006370 ORTHO05D008324 6.2e-33 144.8 176 47.7
SalBow6G1190 Salvia bowleyana HOM05D006370 ORTHO05D008324 6.2e-33 144.8 164 51.8
Sabra13G0057100 Salix brachista HOM05D006370 ORTHO05D008324 1.0e-32 144.1 155 51.0
Cc10_g11540 Coffea canephora HOM05D006370 ORTHO05D008324 1.8e-32 143.3 168 52.4
TWI34G0169 Tripterygium wilfordii HOM05D006370 ORTHO05D008324 1.8e-32 143.3 156 52.6
TWI60G1203 Tripterygium wilfordii HOM05D006370 ORTHO05D008324 2.3e-32 142.9 158 49.4
MSTRG.6248 Avicennia marina HOM05D006370 ORTHO05D008324 4.0e-32 142.1 177 49.2
AUR62043361 Chenopodium quinoa HOM05D006370 ORTHO05D008324 4.0e-32 142.1 159 51.6
Sabra13G0056900 Salix brachista HOM05D006370 ORTHO05D008324 5.2e-32 141.7 155 51.0
CDE10G0041 Ceratophyllum demersum HOM05D002702 ORTHO05D003416 6.8e-32 141.4 170 48.8
FAN26G3131 Fragaria x ananassa HOM05D006370 ORTHO05D008324 1.2e-31 140.6 158 55.1
Zm00001eb057190 Zea mays HOM05D006370 ORTHO05D008324 4.4e-31 138.7 149 51.0
FvH4_1g28570 Fragaria vesca HOM05D006370 ORTHO05D008324 5.8e-31 138.3 159 53.5
Migut.J01529 Erythranthe guttata HOM05D006370 ORTHO05D008324 9.8e-31 137.5 165 52.1
Os03g0748600 Oryza sativa ssp. japonica HOM05D006370 ORTHO05D008324 1.3e-30 137.1 147 52.4
Dinv25046 Davidia involucrata HOM05D006370 ORTHO05D008324 1.7e-30 136.7 118 60.2
Lalb_Chr06g0174141 Lupinus albus HOM05D006370 ORTHO05D008324 3.7e-30 135.6 165 49.1
HanXRQChr01g0026941 Helianthus annuus HOM05D006370 ORTHO05D008324 1.9e-29 133.3 151 51.0
Dinv05555 Davidia involucrata HOM05D006370 ORTHO05D008324 2.4e-29 132.9 121 61.2
FAN19G0680 Fragaria x ananassa HOM05D006370 ORTHO05D008324 2.4e-29 132.9 173 49.7
ECA248G1067 Erigeron canadensis HOM05D006370 ORTHO05D008324 1.2e-28 130.6 161 46.6
Glyma.19G010300 Glycine max HOM05D006370 ORTHO05D008324 1.6e-28 130.2 153 48.4
SGA_v2.0_scaffold69G23224 Striga asiatica HOM05D006370 ORTHO05D008324 1.6e-28 130.2 163 50.3
THA.LOC104823775 Tarenaya hassleriana HOM05D006370 ORTHO05D008324 1.6e-28 130.2 160 50.0
CANSAT01G3230 Cannabis sativa HOM05D006370 ORTHO05D008324 2.0e-28 129.8 166 47.0
Glyma.13G170200 Glycine max HOM05D006370 ORTHO05D008324 2.0e-28 129.8 166 47.6
FAN28G0334 Fragaria x ananassa HOM05D006370 ORTHO05D008324 2.7e-28 129.4 173 49.1
TAR633G0247 Trochodendron aralioides HOM05D001480 ORTHO05D001331 1.3e-27 127.1 94 70.2
THA.LOC104800075 Tarenaya hassleriana HOM05D006370 ORTHO05D008324 1.7e-27 126.7 180 43.3
Prupe.7G012600 Prunus persica HOM05D006370 ORTHO05D008324 3.0e-27 125.9 79 73.4
Actinidia37817 Actinidia chinensis HOM05D006370 ORTHO05D008324 3.9e-27 125.6 99 63.6
Haze_20411 Corylus avellana HOM05D006370 ORTHO05D008324 3.9e-27 125.6 118 59.3
THA.LOC104800403 Tarenaya hassleriana HOM05D006370 ORTHO05D008324 3.9e-27 125.6 178 44.9
BcaC02g09577 Brassica carinata HOM05D006370 ORTHO05D008324 6.6e-27 124.8 160 46.9
BolC4t26007H Brassica oleracea HOM05D006370 ORTHO05D008324 6.6e-27 124.8 160 46.9
CARHR215460 Cardamine hirsuta HOM05D006370 ORTHO05D008324 8.6e-27 124.4 157 45.2
Psat1g089760 Pisum sativum HOM05D006370 ORTHO05D008324 8.6e-27 124.4 161 49.1
Aa31LG9G17570 Aethionema arabicum HOM05D006370 ORTHO05D008324 1.9e-26 123.2 170 44.1
HPP92_022911 Vanilla planifolia HOM05D006370 ORTHO05D008324 1.9e-26 123.2 153 51.0
arahy.Tifrunner.gnm1.ann1.AZ5GA5 Arachis hypogaea HOM05D006370 ORTHO05D008324 4.3e-26 122.1 159 49.7
BcaB06g27082 Brassica carinata HOM05D006370 ORTHO05D008324 5.6e-26 121.7 163 45.4
Carub.0007s3265 Capsella rubella HOM05D006370 ORTHO05D008324 7.3e-26 121.3 154 46.1
C04p44360 Brassica napus HOM05D006370 ORTHO05D008324 1.2e-25 120.6 160 46.2
Sp7g04690 Schrenkiella parvula HOM05D006370 ORTHO05D008324 1.6e-25 120.2 160 43.1
AT5G37480 Arabidopsis thaliana HOM05D006370 ORTHO05D008324 2.1e-25 119.8 159 45.9
Sopen10g031990 Solanum pennellii HOM05D006370 ORTHO05D008324 2.1e-25 119.8 175 41.7
arahy.Tifrunner.gnm1.ann1.ZL000T Arachis hypogaea HOM05D006370 ORTHO05D008324 2.8e-25 119.4 159 49.1
A04p10640 Brassica napus HOM05D006370 ORTHO05D008324 2.8e-25 119.4 160 45.6
Nitab4.5_0000613g0010 Nicotiana tabacum HOM05D006370 ORTHO05D008324 6.2e-25 118.2 173 42.8
Solyc10g081480.2 Solanum lycopersicum HOM05D006370 ORTHO05D008324 6.2e-25 118.2 175 40.6
Lsat_1_v5_gn_1_55401 Lactuca sativa HOM05D006370 ORTHO05D008324 8.1e-25 117.9 82 65.9
Medtr6g027600 Medicago truncatula HOM05D006370 ORTHO05D008324 1.1e-24 117.5 160 45.0
SEGI_24903 Sequoiadendron giganteum HOM05D006370 ORTHO05D008324 1.1e-24 117.5 164 47.6
unitig_744.g24144 Utricularia gibba HOM05D006370 ORTHO05D000703 1.1e-24 117.5 157 46.5
Aqoxy1G00515 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 1.5e-23 113.6 102 57.8
PGSC0003DMG400028217 Solanum tuberosum HOM05D006370 ORTHO05D008324 1.5e-23 113.6 173 40.5
Thhalv10028111m.g Eutrema salsugineum HOM05D006370 ORTHO05D008324 2.0e-23 113.2 166 42.8
Aqoxy1G00516 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 2.6e-23 112.8 111 55.9
Sc07g0007490 Simmondsia chinensis HOM05D006370 ORTHO05D008324 1.9e-21 106.7 143 44.8
SalBow4G2194 Salvia bowleyana HOM05D006370 ORTHO05D008324 6.0e-20 101.7 88 60.2
SalBow6G3000 Salvia bowleyana HOM05D006370 ORTHO05D008324 6.0e-20 101.7 88 60.2
VMungo0540G0157 Vigna mungo HOM05D006370 ORTHO05D008324 1.0e-19 100.9 85 56.5
Phvul.004G050600 Phaseolus vulgaris HOM05D006370 ORTHO05D008324 3.9e-19 99.0 92 55.4
SGA_v2.0_scaffold66G22394 Striga asiatica HOM05D006370 ORTHO05D008324 7.3e-18 94.7 172 41.9
Lj2g0006862 Lotus japonicus HOM05D006370 ORTHO05D008324 1.2e-15 87.4 87 52.9
Nitab4.5_0000387g0020 Nicotiana tabacum HOM05D006370 ORTHO05D008324 2.6e-15 86.3 104 44.2
BcaC05g29112 Brassica carinata HOM05D006370 ORTHO05D008324 3.2e-13 79.3 99 44.4
C05p53410 Brassica napus HOM05D006370 ORTHO05D008324 4.1e-13 79.0 82 51.2
Mapoly0066s0112 Marchantia polymorpha HOM05D006370 ORTHO05D008324 7.1e-13 78.2 78 51.3
Mapoly0007s0154 Marchantia polymorpha HOM05D006370 ORTHO05D008324 2.1e-12 76.6 164 33.5
BolC5t34010H Brassica oleracea HOM05D006370 ORTHO05D008324 3.5e-12 75.9 82 50.0
BolC5t34018H Brassica oleracea HOM05D006370 ORTHO05D008324 3.5e-12 75.9 82 50.0
SMO196G0263 Selaginella moellendorffii HOM05D006370 ORTHO05D008324 1.1e-10 70.9 156 35.9
Pp3c2_15250 Physcomitrium patens HOM05D006370 ORTHO05D008324 1.2e-07 60.8 67 44.8
SalBow5G3237 Salvia bowleyana HOM05D006370 ORTHO05D008324 2.0e-07 60.1 39 69.2
Pp3c6_3990 Physcomitrium patens HOM05D001298 ORTHO05D001110 2.6e-07 59.7 80 42.5


User provided reference genes

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