Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g14540 Nelumbo nucifera HOM05D007281 ORTHO05D009241 2.3e-48 195.3 101 100.0
Nn8g41289 Nelumbo nucifera HOM05D007281 ORTHO05D009241 5.5e-26 120.9 96 68.8
Nn1g08105 Nelumbo nucifera HOM05D007281 ORTHO05D009241 8.2e-22 107.1 67 80.6
Dinv15494 Davidia involucrata HOM05D007281 ORTHO05D009241 2.0e-15 85.9 74 54.1
TAR636G0075 Trochodendron aralioides HOM05D007281 ORTHO05D009241 9.7e-15 83.6 76 56.6
Hma1.2p1_0565F.1_g179540 Hydrangea macrophylla HOM05D007281 ORTHO05D009241 2.8e-14 82.0 74 51.4
TAR633G2446 Trochodendron aralioides HOM05D007281 ORTHO05D009241 3.7e-14 81.6 77 54.5
CSS0001951 Camellia sinensis var. sinensis HOM05D007281 ORTHO05D009241 4.1e-13 78.2 75 52.0
CSS0030135 Camellia sinensis var. sinensis HOM05D007281 ORTHO05D009241 4.1e-13 78.2 75 52.0
MBI03_g06061_MAGBIO Magnolia biondii HOM05D007281 ORTHO05D009241 4.1e-13 78.2 97 47.4
Potri.001G273100 Populus trichocarpa HOM05D007281 ORTHO05D009241 1.2e-12 76.6 95 43.2
Sabra16G0168300 Salix brachista HOM05D007281 ORTHO05D009241 1.2e-12 76.6 97 41.2
Actinidia30489 Actinidia chinensis HOM05D007281 ORTHO05D009241 4.5e-12 74.7 74 52.7
DCAR_012978 Daucus carota HOM05D007281 ORTHO05D009241 4.5e-12 74.7 72 47.2
Rhsim04G0063100 Rhododendron simsii HOM05D007281 ORTHO05D009241 1.0e-11 73.6 71 52.1
TWI36G0005 Tripterygium wilfordii HOM05D007281 ORTHO05D009241 1.0e-11 73.6 74 43.2
GSVIVG01020865001 Vitis vinifera HOM05D007281 ORTHO05D009241 1.3e-11 73.2 97 47.4
Lj1P735T42 Lonicera japonica HOM05D007281 ORTHO05D009241 2.9e-11 72.0 71 53.5
Sc06g0009160 Simmondsia chinensis HOM05D007281 ORTHO05D009241 2.9e-11 72.0 74 51.4
Sabra09G0050300 Salix brachista HOM05D007281 ORTHO05D009241 2.5e-10 68.9 72 44.4
Atru.chr6.3074 Acer truncatum HOM05D007281 ORTHO05D009241 3.2e-10 68.6 75 45.3
ClCG01G013900 Citrullus lanatus HOM05D007281 ORTHO05D009241 4.2e-10 68.2 75 41.3
Manes.01G177300 Manihot esculenta HOM05D007281 ORTHO05D009241 5.5e-10 67.8 96 38.5
Potri.009G067400 Populus trichocarpa HOM05D007281 ORTHO05D009241 7.2e-10 67.4 75 42.7
Nitab4.5_0002370g0080 Nicotiana tabacum HOM05D007281 ORTHO05D009241 2.1e-09 65.9 96 37.5
PSO384G2432 Papaver somniferum HOM05D007281 ORTHO05D009241 2.7e-09 65.5 76 47.4
Thecc.02G171700 Theobroma cacao HOM05D007281 ORTHO05D009241 3.6e-09 65.1 74 43.2
Solyc07g054680.3 Solanum lycopersicum HOM05D007281 ORTHO05D009241 4.7e-09 64.7 96 38.5
Ciclev10016159m.g Citrus clementina HOM05D007281 ORTHO05D009241 6.1e-09 64.3 77 41.6
Cc05_g06270 Coffea canephora HOM05D007281 ORTHO05D009241 8.0e-09 63.9 96 40.6
Duzib052G0115 Durio zibethinus HOM05D007281 ORTHO05D009241 8.0e-09 63.9 70 41.4
SalBow7G4701 Salvia bowleyana HOM05D007281 ORTHO05D009241 1.4e-08 63.2 70 42.9
Cpa.g.sc116.70 Carica papaya HOM05D007281 ORTHO05D009241 2.3e-08 62.4 74 45.9
AUR62041771 Chenopodium quinoa HOM05D007281 ORTHO05D009241 2.3e-08 62.4 74 43.2
PSO339G5345 Papaver somniferum HOM05D007281 ORTHO05D009241 3.0e-08 62.0 71 47.9
Peaxi162Scf00007g02726 Petunia axillaris HOM05D007281 ORTHO05D009241 3.0e-08 62.0 96 37.5
Nitab4.5_0001871g0100 Nicotiana tabacum HOM05D007281 ORTHO05D009241 6.7e-08 60.8 99 36.4
Aqoxy1G00179 Aquilegia oxysepala HOM05D007281 ORTHO05D009241 8.8e-08 60.5 73 43.8
ECA234G1359 Erigeron canadensis HOM05D007281 ORTHO05D009241 1.1e-07 60.1 77 36.4
PGSC0003DMG400018370 Solanum tuberosum HOM05D007281 ORTHO05D009241 1.1e-07 60.1 74 40.5
CiPaw.03G169800 Carya illinoinensis HOM05D007281 ORTHO05D009241 2.0e-07 59.3 75 42.7
Ah.12g062420 Amaranthus hybridus HOM05D007281 ORTHO05D009241 4.4e-07 58.2 74 39.2
EL10As1g23104 Beta vulgaris HOM05D007281 ORTHO05D009241 4.4e-07 58.2 74 40.5
Sed0007470 Sechium edule HOM05D007281 ORTHO05D009241 4.4e-07 58.2 76 39.5
HanXRQChr15g0488101 Helianthus annuus HOM05D007281 ORTHO05D009241 5.7e-07 57.8 78 37.2
Hund01235 Selenicereus undatus HOM05D007281 ORTHO05D009241 7.5e-07 57.4 74 40.5
Hund01238 Selenicereus undatus HOM05D007281 ORTHO05D009241 7.5e-07 57.4 74 40.5
QL03p011182 Quercus lobata HOM05D007281 ORTHO05D009241 9.7e-07 57.0 72 41.7
Cfa014545 Carpinus fangiana HOM05D007281 ORTHO05D009241 1.3e-06 56.6 74 43.2
Gorai.012G131800 Gossypium raimondii HOM05D007281 ORTHO05D009241 1.3e-06 56.6 74 33.8
Gohir.D04G145700 Gossypium hirsutum HOM05D007281 ORTHO05D009241 1.7e-06 56.2 74 33.8
Lsat_1_v5_gn_4_69540 Lactuca sativa HOM05D007281 ORTHO05D009241 1.7e-06 56.2 77 32.5
Haze_13088 Corylus avellana HOM05D007281 ORTHO05D009241 2.8e-06 55.5 74 41.9
Glyma.13G301000 Glycine max HOM05D007281 ORTHO05D009241 2.8e-06 55.5 70 38.6
MSTRG.13304 Avicennia marina HOM05D007281 ORTHO05D009241 6.3e-06 54.3 77 32.5
CAN.G508.23 Capsicum annuum HOM05D007281 ORTHO05D009241 6.3e-06 54.3 93 36.6
Gohir.A04G105900 Gossypium hirsutum HOM05D007281 ORTHO05D009241 6.3e-06 54.3 74 32.4


User provided reference genes

Program Settings