Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g14476 Nelumbo nucifera HOM05D018115 ORTHO05D017274 2.2e-84 315.5 147 100.0
MBI15_g37630_MAGBIO Magnolia biondii HOM05D018115 ORTHO05D017274 2.3e-12 76.3 124 36.3
TAR168G0001 Trochodendron aralioides HOM05D000896 ORTHO05D000594 1.6e-10 70.1 125 36.0
TAR636G1058 Trochodendron aralioides HOM05D000896 ORTHO05D000594 1.6e-10 70.1 125 36.0
Sc07g0010080 Simmondsia chinensis HOM05D020218 ORTHO05D017274 2.3e-09 66.2 121 33.9
TPR.G8024 Trifolium pratense HOM05D002733 ORTHO05D003856 2.0e-08 63.2 108 30.6
Actinidia20408 Actinidia chinensis HOM05D002733 ORTHO05D003856 1.3e-07 60.5 118 33.9
Actinidia09441 Actinidia chinensis HOM05D002733 ORTHO05D003856 2.2e-07 59.7 117 31.6
ATR0594G191 Amborella trichopoda HOM05D020218 ORTHO05D013427 2.2e-07 59.7 130 33.1
MBI18_g14086_MAGBIO Magnolia biondii HOM05D018115 ORTHO05D017274 2.2e-07 59.7 120 31.7
TPR.G12039 Trifolium pratense HOM05D002733 ORTHO05D003856 2.2e-07 59.7 109 30.3
TPR.G1395 Trifolium pratense HOM05D002733 ORTHO05D003856 2.9e-07 59.3 110 30.9
CiPaw.04G096300 Carya illinoinensis HOM05D000896 ORTHO05D000594 3.7e-07 58.9 133 29.3
CiPaw.04G096400 Carya illinoinensis HOM05D000896 ORTHO05D000594 3.7e-07 58.9 133 29.3
Haze_00197 Corylus avellana HOM05D002733 ORTHO05D003856 3.7e-07 58.9 113 30.1
Duzib213G0038 Durio zibethinus HOM05D002733 ORTHO05D003856 4.9e-07 58.5 114 32.5
Cpa.g.sc81.85 Carica papaya HOM05D002733 ORTHO05D003856 6.4e-07 58.2 114 30.7
Manes.03G176000 Manihot esculenta HOM05D002733 ORTHO05D003856 6.4e-07 58.2 114 30.7
Manes.03G176200 Manihot esculenta HOM05D002733 ORTHO05D003856 1.1e-06 57.4 114 30.7
Ciclev10030162m.g Citrus clementina HOM05D000896 ORTHO05D000594 1.4e-06 57.0 138 30.4
VMungo1080G0152 Vigna mungo HOM05D002733 ORTHO05D003856 1.9e-06 56.6 114 29.8
Gohir.D06G064250 Gossypium hirsutum HOM05D002733 ORTHO05D003856 2.4e-06 56.2 112 29.5
Gorai.010G075000 Gossypium raimondii HOM05D002733 ORTHO05D003856 2.4e-06 56.2 112 29.5
Gohir.A06G065650 Gossypium hirsutum HOM05D002733 ORTHO05D003856 5.4e-06 55.1 112 29.5
PSO782G1409 Papaver somniferum HOM05D002733 ORTHO05D003856 5.4e-06 55.1 123 29.3
FAN23G1126 Fragaria x ananassa HOM05D002733 ORTHO05D003856 7.0e-06 54.7 114 27.2
unitig_26.g9422 Utricularia gibba HOM05D013692 ORTHO05D011718 7.0e-06 54.7 116 31.0


User provided reference genes

Program Settings