Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g14423 Nelumbo nucifera HOM05D003892 ORTHO05D004522 0.0e+00 1264.6 642 100.0
TAR633G1336 Trochodendron aralioides HOM05D003892 ORTHO05D004522 1.1e-228 797.0 654 67.1
GSVIVG01015854001 Vitis vinifera HOM05D003892 ORTHO05D004522 1.9e-196 689.9 654 59.3
QL07p026283 Quercus lobata HOM05D003892 ORTHO05D004522 5.0e-189 665.2 651 57.1
Cfa017615 Carpinus fangiana HOM05D003892 ORTHO05D004522 5.5e-188 661.8 651 57.3
Hma1.2p1_0304F.1_g119340 Hydrangea macrophylla HOM05D003892 ORTHO05D004522 9.7e-185 651.0 649 57.5
Potri.016G065600 Populus trichocarpa HOM05D003892 ORTHO05D004522 3.7e-184 649.0 651 56.8
Aqoxy2G02397 Aquilegia oxysepala HOM05D003892 ORTHO05D004522 8.2e-184 647.9 658 56.1
Manes.08G037500 Manihot esculenta HOM05D003892 ORTHO05D004522 2.0e-182 643.3 650 56.3
Aqoxy1G00583 Aquilegia oxysepala HOM05D003892 ORTHO05D004522 4.5e-182 642.1 657 56.6
Potri.006G199200 Populus trichocarpa HOM05D003892 ORTHO05D004522 2.9e-181 639.4 646 56.7
CSS0037074 Camellia sinensis var. sinensis HOM05D003892 ORTHO05D004522 3.8e-181 639.0 652 55.8
Thecc.05G110400 Theobroma cacao HOM05D003892 ORTHO05D004522 3.8e-181 639.0 651 55.6
Ciclev10011278m.g Citrus clementina HOM05D003892 ORTHO05D004522 1.4e-180 637.1 648 56.0
CiPaw.10G021500 Carya illinoinensis HOM05D003892 ORTHO05D004522 2.5e-180 636.3 651 57.0
COL.COLO4_29492 Corchorus olitorius HOM05D003892 ORTHO05D004522 1.7e-176 623.6 650 54.3
Lj1C1061G1 Lonicera japonica HOM05D003892 ORTHO05D004522 1.7e-176 623.6 650 55.8
Actinidia03963 Actinidia chinensis HOM05D003892 ORTHO05D004522 1.1e-175 620.9 664 54.4
Haze_20130 Corylus avellana HOM05D003892 ORTHO05D004522 7.2e-172 608.2 713 51.1
PSO210G1032 Papaver somniferum HOM05D003892 ORTHO05D004522 9.4e-172 607.8 659 53.6
Duzib106G1451 Durio zibethinus HOM05D003892 ORTHO05D004522 2.1e-171 606.7 652 54.4
PSO832G2838 Papaver somniferum HOM05D003892 ORTHO05D004522 6.7e-170 601.7 658 53.2
MBI11_g43834_MAGBIO Magnolia biondii HOM05D003892 ORTHO05D004522 2.0e-169 600.1 656 53.8
Gohir.D04G093300 Gossypium hirsutum HOM05D003892 ORTHO05D004522 3.3e-169 599.4 651 54.1
Duzib128G1914 Durio zibethinus HOM05D003892 ORTHO05D004522 4.8e-168 595.5 652 53.8
Gorai.009G395500 Gossypium raimondii HOM05D003892 ORTHO05D004522 1.1e-167 594.3 651 53.8
TWI15G0645 Tripterygium wilfordii HOM05D003892 ORTHO05D004522 3.1e-167 592.8 648 53.9
Atru.chr8.1281 Acer truncatum HOM05D003892 ORTHO05D004522 2.2e-165 586.6 676 50.9
Lalb_Chr01g0017711 Lupinus albus HOM05D003892 ORTHO05D004522 6.5e-165 585.1 666 52.3
Lj1g0007585 Lotus japonicus HOM05D003892 ORTHO05D004522 2.5e-164 583.2 651 52.1
AUR62038416 Chenopodium quinoa HOM05D003892 ORTHO05D004522 6.1e-163 578.6 652 52.0
DCAR_013462 Daucus carota HOM05D003892 ORTHO05D004522 1.0e-162 577.8 648 51.7
Gorai.002G233300 Gossypium raimondii HOM05D003892 ORTHO05D004522 6.8e-162 575.1 650 52.6
TAR636G2427 Trochodendron aralioides HOM05D003892 ORTHO05D004522 6.8e-162 575.1 395 73.9
Gohir.A01G199500 Gossypium hirsutum HOM05D003892 ORTHO05D004522 1.5e-161 573.9 654 52.3
EL10Ac5g11803 Beta vulgaris HOM05D003892 ORTHO05D004522 4.4e-161 572.4 643 51.3
Gohir.D01G189600 Gossypium hirsutum HOM05D003892 ORTHO05D004522 9.8e-161 571.2 654 52.1
Lalb_Chr25g0287841 Lupinus albus HOM05D003892 ORTHO05D004522 9.8e-161 571.2 656 50.8
AUR62036307 Chenopodium quinoa HOM05D003892 ORTHO05D004522 1.3e-160 570.9 652 51.2
Sabra06G0153100 Salix brachista HOM05D003892 ORTHO05D004522 4.8e-160 568.9 648 52.5
arahy.Tifrunner.gnm1.ann1.H4389H Arachis hypogaea HOM05D003892 ORTHO05D004522 6.3e-160 568.5 677 50.5
CANSAT64G1569 Cannabis sativa HOM05D003892 ORTHO05D004522 1.4e-159 567.4 651 51.8
Sc22g0003030 Simmondsia chinensis HOM05D003892 ORTHO05D004522 5.4e-159 565.5 644 52.5
Prupe.7G089700 Prunus persica HOM05D003892 ORTHO05D004522 1.2e-158 564.3 649 50.7
Rhsim03G0058500 Rhododendron simsii HOM05D003892 ORTHO05D004522 1.2e-158 564.3 660 50.3
Sabra16G0067100 Salix brachista HOM05D003892 ORTHO05D004522 1.0e-157 561.2 652 51.7
Hund10790 Selenicereus undatus HOM05D003892 ORTHO05D004522 1.3e-157 560.8 646 50.6
Eucgr.A02543 Eucalyptus grandis HOM05D003892 ORTHO05D004522 4.2e-156 555.8 654 48.8
Sed0022353 Sechium edule HOM05D003892 ORTHO05D004522 4.7e-155 552.4 653 50.4
Solyc01g006700.3 Solanum lycopersicum HOM05D003892 ORTHO05D004522 2.3e-154 550.1 649 47.8
Psat3g027080 Pisum sativum HOM05D003892 ORTHO05D004522 4.0e-154 549.3 649 49.0
Ca_09081_v3 Cicer arietinum L. HOM05D003892 ORTHO05D004522 8.8e-154 548.1 649 49.5
PGSC0003DMG400021344 Solanum tuberosum HOM05D003892 ORTHO05D004522 2.0e-153 547.0 658 48.2
Dinv25081 Davidia involucrata HOM05D003892 ORTHO05D004522 3.4e-153 546.2 519 59.3
Cc06_g06980 Coffea canephora HOM05D003892 ORTHO05D004522 7.5e-153 545.0 646 50.6
arahy.Tifrunner.gnm1.ann1.IGZ3F9 Arachis hypogaea HOM05D003892 ORTHO05D004522 9.8e-153 544.7 628 50.5
Glyma.03G205000 Glycine max HOM05D003892 ORTHO05D004522 9.8e-153 544.7 649 50.4
Sopen01g002690 Solanum pennellii HOM05D003892 ORTHO05D004522 8.3e-152 541.6 654 47.6
ClCG10G017850 Citrullus lanatus HOM05D003892 ORTHO05D004522 1.8e-151 540.4 654 49.8
HPP92_013933 Vanilla planifolia HOM05D003892 ORTHO05D004522 1.8e-151 540.4 658 50.2
TPR.G34451 Trifolium pratense HOM05D003892 ORTHO05D004522 5.4e-151 538.9 652 49.2
Oeu058130.1 Olea europaea HOM05D003892 ORTHO05D004522 7.0e-151 538.5 706 47.7
MD14G1044900 Malus domestica HOM05D003892 ORTHO05D004522 9.2e-151 538.1 648 48.6
Glyma.19G202400 Glycine max HOM05D003892 ORTHO05D004522 3.5e-150 536.2 648 48.8
MD12G1046200 Malus domestica HOM05D003892 ORTHO05D004522 2.3e-149 533.5 647 47.9
Medtr7g106900 Medicago truncatula HOM05D003892 ORTHO05D004522 2.9e-149 533.1 649 48.1
Phvul.001G198500 Phaseolus vulgaris HOM05D003892 ORTHO05D004522 6.6e-149 531.9 646 49.5
THA.LOC104825242 Tarenaya hassleriana HOM05D003892 ORTHO05D004522 6.6e-149 531.9 649 48.7
arahy.Tifrunner.gnm1.ann1.L9LT45 Arachis hypogaea HOM05D003892 ORTHO05D004522 7.3e-148 528.5 663 48.7
FAN05G2923 Fragaria x ananassa HOM05D003892 ORTHO05D004522 9.5e-148 528.1 649 48.5
CDE07G1113 Ceratophyllum demersum HOM05D003892 ORTHO05D004522 1.8e-146 523.9 662 47.0
Lj6g0017825 Lotus japonicus HOM05D003892 ORTHO05D004522 2.3e-146 523.5 630 49.5
VMungo1383G0340 Vigna mungo HOM05D003892 ORTHO05D004522 1.2e-145 521.2 645 48.7
CAN.G388.52 Capsicum annuum HOM05D003892 ORTHO05D004522 2.6e-145 520.0 658 46.8
Ah.12g059580 Amaranthus hybridus HOM05D003892 ORTHO05D004522 5.7e-145 518.8 652 48.3
FAN02G1525 Fragaria x ananassa HOM05D003892 ORTHO05D004522 3.7e-144 516.2 650 48.3
CsaV3_3G038440 Cucumis sativus L. HOM05D003892 ORTHO05D004522 6.4e-144 515.4 659 48.0
MELO3C009588.2 Cucumis melo HOM05D003892 ORTHO05D004522 1.2e-142 511.1 660 47.7
HanXRQChr02g0052851 Helianthus annuus HOM05D003892 ORTHO05D004522 2.7e-142 510.0 650 47.8
RcHm_v2.0_Chr3g0477411 Rosa chinensis HOM05D003892 ORTHO05D004522 7.8e-142 508.4 648 47.2
THA.LOC104824220 Tarenaya hassleriana HOM05D003892 ORTHO05D004522 7.8e-142 508.4 657 48.1
MSTRG.5909 Avicennia marina HOM05D003892 ORTHO05D004522 1.3e-141 507.7 654 48.3
Sp5g07700 Schrenkiella parvula HOM05D003892 ORTHO05D004522 1.7e-141 507.3 655 47.5
Aa31LG11G3840 Aethionema arabicum HOM05D003892 ORTHO05D004522 2.3e-141 506.9 650 49.2
FAN05G3327 Fragaria x ananassa HOM05D003892 ORTHO05D004522 2.3e-141 506.9 680 46.2
FAN14G4612 Fragaria x ananassa HOM05D003892 ORTHO05D004522 3.3e-140 503.1 680 45.9
AL5G35820 Arabidopsis lyrata HOM05D003892 ORTHO05D004522 5.6e-140 502.3 649 47.1
CARHR164690 Cardamine hirsuta HOM05D003892 ORTHO05D004522 2.8e-139 500.0 652 45.9
HanXRQChr13g0398781 Helianthus annuus HOM05D003892 ORTHO05D004522 6.2e-139 498.8 655 47.0
arahy.Tifrunner.gnm1.ann1.P5VIE6 Arachis hypogaea HOM05D003892 ORTHO05D004522 1.8e-138 497.3 654 47.6
ECA233G3816 Erigeron canadensis HOM05D003892 ORTHO05D004522 1.8e-138 497.3 620 48.7
PGR004G2391 Punica granatum HOM05D003892 ORTHO05D004522 5.2e-138 495.7 647 47.9
Thhalv10010226m.g Eutrema salsugineum HOM05D003892 ORTHO05D004522 4.4e-137 492.7 627 46.7
Migut.J00728 Erythranthe guttata HOM05D003892 ORTHO05D004522 5.8e-137 492.3 647 47.1
AT3G54750 Arabidopsis thaliana HOM05D003892 ORTHO05D004522 9.8e-137 491.5 619 45.9
Nitab4.5_0003430g0010 Nicotiana tabacum HOM05D003892 ORTHO05D004522 1.3e-136 491.1 652 46.8
ATR0580G241 Amborella trichopoda HOM05D003892 ORTHO05D004522 1.7e-136 490.7 625 46.9
BraA09t40224Z Brassica rapa HOM05D003892 ORTHO05D004522 3.7e-136 489.6 651 45.9
SGA_v2.0_scaffold112G31566 Striga asiatica HOM05D003892 ORTHO05D004522 3.7e-136 489.6 654 46.8
A09p47680 Brassica napus HOM05D003892 ORTHO05D004522 1.1e-135 488.0 651 45.9
SalBow1G1519 Salvia bowleyana HOM05D003892 ORTHO05D004522 9.2e-135 485.0 649 45.8
Lsat_1_v5_gn_6_34240 Lactuca sativa HOM05D003892 ORTHO05D004522 1.2e-134 484.6 651 47.0
SalBow1G7123 Salvia bowleyana HOM05D003892 ORTHO05D004522 1.2e-134 484.6 649 45.8
Carub.0005s2135 Capsella rubella HOM05D003892 ORTHO05D004522 2.0e-134 483.8 650 46.0
Peaxi162Scf00751g00063 Petunia axillaris HOM05D003892 ORTHO05D004522 6.0e-134 482.3 657 44.7
BolC8t50600H Brassica oleracea HOM05D003892 ORTHO05D004522 1.3e-133 481.1 647 45.9
BcaC07g39789 Brassica carinata HOM05D003892 ORTHO05D004522 1.7e-133 480.7 647 45.9
Peaxi162Scf00210g00093 Petunia axillaris HOM05D003892 ORTHO05D004522 6.6e-133 478.8 657 44.4
BcaB01g00163 Brassica carinata HOM05D003892 ORTHO05D004522 7.3e-132 475.3 677 45.2
TWI81G0594 Tripterygium wilfordii HOM05D003892 ORTHO05D004522 6.2e-131 472.2 517 54.9
C08p29890 Brassica napus HOM05D003892 ORTHO05D004522 1.1e-130 471.5 645 45.7
BcaB02g08458 Brassica carinata HOM05D003892 ORTHO05D004522 1.4e-130 471.1 648 45.7
Zm00001eb032200 Zea mays HOM05D003892 ORTHO05D004522 8.9e-130 468.4 648 45.5
FvH4_6g21040 Fragaria vesca HOM05D003892 ORTHO05D004522 1.2e-129 468.0 580 49.0
BraA04t16218Z Brassica rapa HOM05D003892 ORTHO05D004522 7.5e-129 465.3 648 45.2
Sed0022528 Sechium edule HOM05D003892 ORTHO05D004522 7.5e-129 465.3 651 46.2
SGA_v2.0_scaffold31G12827 Striga asiatica HOM05D003892 ORTHO05D004522 3.7e-128 463.0 652 45.7
ECA238G3852 Erigeron canadensis HOM05D003892 ORTHO05D004522 1.4e-127 461.1 635 43.8
A04p05070 Brassica napus HOM05D003892 ORTHO05D004522 1.9e-127 460.7 648 45.2
Os12g0621700 Oryza sativa ssp. japonica HOM05D003892 ORTHO05D004522 2.4e-127 460.3 650 44.2
C04p37570 Brassica napus HOM05D003892 ORTHO05D004522 1.8e-122 444.1 649 43.3
BcaC02g09701 Brassica carinata HOM05D003892 ORTHO05D004522 3.1e-122 443.4 649 43.5
Dinv11899 Davidia involucrata HOM05D003892 ORTHO05D004522 1.2e-121 441.4 429 58.5
Lsat_1_v5_gn_2_121661 Lactuca sativa HOM05D003892 ORTHO05D004522 6.2e-115 419.1 645 42.6
Cpa.g.sc222.13 Carica papaya HOM05D003892 ORTHO05D004522 5.4e-111 406.0 592 44.6
MBI11_g33439_MAGBIO Magnolia biondii HOM05D003892 ORTHO05D004522 2.7e-110 403.7 356 61.8
Aa31LG2G20030 Aethionema arabicum HOM05D003892 ORTHO05D004522 3.5e-110 403.3 513 47.2
Gohir.A04G055942 Gossypium hirsutum HOM05D003892 ORTHO05D004522 6.4e-104 382.5 324 60.5
Medtr7g029625 Medicago truncatula HOM05D003892 ORTHO05D004522 2.9e-96 357.1 620 40.0
GSVIVG01020969001 Vitis vinifera HOM05D003892 ORTHO05D004522 3.9e-93 346.7 390 52.3
Nitab4.5_0000300g0030 Nicotiana tabacum HOM05D003892 ORTHO05D004522 5.1e-93 346.3 514 43.4
CSS0004478 Camellia sinensis var. sinensis HOM05D003892 ORTHO05D004522 1.5e-89 334.7 389 52.4
Actinidia37779 Actinidia chinensis HOM05D003892 ORTHO05D004522 1.9e-87 327.8 251 65.3
vmacro07513 Vaccinium macrocarpon HOM05D003892 ORTHO05D004522 1.8e-77 294.7 386 47.7
Pp3c26_8020 Physcomitrium patens HOM05D003892 ORTHO05D004522 1.5e-76 291.6 630 31.7
Sed0005279 Sechium edule HOM05D000521 ORTHO05D004522 6.9e-74 282.7 414 46.6
Pp3c4_31220 Physcomitrium patens HOM05D003892 ORTHO05D004522 2.0e-73 281.2 659 33.7
AagrBONN_evm.TU.Sc2ySwM_228.3493 Anthoceros agrestis HOM05D003892 ORTHO05D004522 4.7e-70 270.0 361 41.6
SMO351G0585 Selaginella moellendorffii HOM05D003892 ORTHO05D004522 4.7e-70 270.0 610 34.3
Mapoly0011s0047 Marchantia polymorpha HOM05D003892 ORTHO05D004522 6.3e-67 259.6 636 31.8
arahy.Tifrunner.gnm1.ann1.75SLRD Arachis hypogaea HOM05D003892 ORTHO05D004522 9.1e-66 255.8 258 56.6
Cfa017831 Carpinus fangiana HOM05D003892 ORTHO05D004522 4.2e-63 246.9 223 57.0
SHI28320 Sapria himalayana HOM05D003892 ORTHO05D004522 7.2e-63 246.1 606 33.3
Gohir.D07G211433 Gossypium hirsutum HOM05D003892 ORTHO05D004522 3.9e-61 240.4 431 41.3
unitig_26.g9151 Utricularia gibba HOM05D003892 ORTHO05D004522 1.1e-58 232.3 246 49.2
unitig_749.g14208 Utricularia gibba HOM05D003892 ORTHO05D004522 5.9e-57 226.5 239 49.4
Nitab4.5_0000429g0010 Nicotiana tabacum HOM05D003892 ORTHO05D004522 1.2e-54 218.8 338 41.4
vmacro07512 Vaccinium macrocarpon HOM05D003892 ORTHO05D004522 2.3e-45 188.0 269 47.2
CSS0016552 Camellia sinensis var. sinensis HOM05D003892 ORTHO05D004522 6.8e-45 186.4 180 55.6
Aqoxy2G02169 Aquilegia oxysepala HOM05D001785 ORTHO05D001933 5.4e-42 176.8 290 44.5
GSVIVG01020973001 Vitis vinifera HOM05D003892 ORTHO05D004522 4.5e-41 173.7 233 47.2
Gohir.A04G055921 Gossypium hirsutum HOM05D003892 ORTHO05D004522 5.0e-40 170.2 271 46.5
CBR_g20103 Chara braunii HOM05D003892 ORTHO05D004522 1.6e-38 165.2 496 28.6
TAR636G1189 Trochodendron aralioides HOM05D003892 ORTHO05D004522 1.8e-37 161.8 214 53.7
GSVIVG01020966001 Vitis vinifera HOM05D003892 ORTHO05D004522 1.3e-32 145.6 95 75.8
arahy.Tifrunner.gnm1.ann1.R2HNIM Arachis hypogaea HOM05D003892 ORTHO05D004522 3.8e-32 144.1 301 37.2
Nitab4.5_0003430g0040 Nicotiana tabacum HOM05D003892 ORTHO05D004522 8.6e-32 142.9 231 41.1
HPP92_012152 Vanilla planifolia HOM05D003892 ORTHO05D004522 9.5e-31 139.4 117 59.0
arahy.Tifrunner.gnm1.ann1.C1NY7P Arachis hypogaea HOM05D003892 ORTHO05D004522 1.7e-27 128.6 275 35.6
Actinidia37778 Actinidia chinensis HOM05D003892 ORTHO05D004522 2.9e-27 127.9 257 40.5
arahy.Tifrunner.gnm1.ann1.84GXZP Arachis hypogaea HOM05D003892 ORTHO05D004522 1.9e-26 125.2 271 35.8
SEGI_25684 Sequoiadendron giganteum HOM05D003892 ORTHO05D004522 1.3e-24 119.0 284 37.7
Sabra17G0067200 Salix brachista HOM05D003892 ORTHO05D004522 8.9e-21 106.3 88 61.4
ATR1154G016 Amborella trichopoda HOM05D003892 ORTHO05D004522 4.6e-17 94.0 97 47.4
SEGI_30208 Sequoiadendron giganteum HOM05D003892 ORTHO05D004522 4.6e-17 94.0 81 55.6
Cre03.g197600 Chlamydomonas reinhardtii HOM05D003892 ORTHO05D004522 1.7e-16 92.0 289 27.3
arahy.Tifrunner.gnm1.ann1.Z2YKN3 Arachis hypogaea HOM05D003892 ORTHO05D004522 3.3e-15 87.8 189 37.6
arahy.Tifrunner.gnm1.ann1.U7JCXR Arachis hypogaea HOM05D003892 ORTHO05D004522 2.1e-14 85.1 196 36.7
GSVIVG01022517001 Vitis vinifera HOM05D003892 ORTHO05D004522 3.7e-11 74.3 67 59.7
Glyma.10G214400 Glycine max HOM05D003892 ORTHO05D004522 5.4e-10 70.5 197 29.9
Ah.02g116070 Amaranthus hybridus HOM05D003892 ORTHO05D004522 2.1e-09 68.6 89 47.2
CSS0023890 Camellia sinensis var. sinensis HOM05D003892 ORTHO05D004522 2.3e-08 65.1 44 61.4
Nitab4.5_0000123g0040 Nicotiana tabacum HOM05D003892 ORTHO05D004522 5.6e-07 60.5 118 41.5
arahy.Tifrunner.gnm1.ann1.RB1WVK Arachis hypogaea HOM05D003892 ORTHO05D004522 3.6e-06 57.8 178 31.5


User provided reference genes

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