Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g14418 Nelumbo nucifera HOM05D000133 ORTHO05D005274 4.3e-46 187.6 91 100.0
Nn3g17280 Nelumbo nucifera HOM05D000133 ORTHO05D005274 6.3e-13 77.4 73 58.9
Nn4g23211 Nelumbo nucifera HOM05D000133 ORTHO05D005274 1.8e-12 75.9 73 57.5
Aqoxy3G03433 Aquilegia oxysepala HOM05D000133 ORTHO05D005274 3.1e-12 75.1 73 56.2
ATR0564G529 Amborella trichopoda HOM05D000133 ORTHO05D005274 5.3e-12 74.3 73 54.8
Ciclev10021861m.g Citrus clementina HOM05D000133 ORTHO05D005274 5.3e-12 74.3 73 56.2
RcHm_v2.0_Chr7g0181611 Rosa chinensis HOM05D000133 ORTHO05D005274 6.9e-12 73.9 73 56.2
HPP92_016485 Vanilla planifolia HOM05D000133 ORTHO05D005274 6.9e-12 73.9 73 56.2
HPP92_016499 Vanilla planifolia HOM05D000133 ORTHO05D005274 6.9e-12 73.9 73 56.2
Dinv38728 Davidia involucrata HOM05D000133 ORTHO05D005274 9.1e-12 73.6 73 54.8
GSVIVG01007988001 Vitis vinifera HOM05D000133 ORTHO05D005274 9.1e-12 73.6 73 54.8
CDE02G0122 Ceratophyllum demersum HOM05D000133 ORTHO05D005274 1.2e-11 73.2 73 54.8
Eucgr.B00523 Eucalyptus grandis HOM05D000133 ORTHO05D005274 1.2e-11 73.2 73 54.8
HanXRQChr08g0236621 Helianthus annuus HOM05D000133 ORTHO05D005274 1.2e-11 73.2 73 54.8
Oeu002088.1 Olea europaea HOM05D000133 ORTHO05D005274 1.2e-11 73.2 73 54.8
Oeu047287.1 Olea europaea HOM05D000133 ORTHO05D005274 1.2e-11 73.2 73 54.8
Peaxi162Scf00274g00048 Petunia axillaris HOM05D000133 ORTHO05D005274 1.2e-11 73.2 73 54.8
AT3G47470 Arabidopsis thaliana HOM05D000133 ORTHO05D005274 1.5e-11 72.8 73 54.8
MSTRG.11378 Avicennia marina HOM05D000133 ORTHO05D005274 1.5e-11 72.8 73 54.8
BcaB01g00920 Brassica carinata HOM05D000133 ORTHO05D005274 1.5e-11 72.8 73 54.8
BcaC01g01821 Brassica carinata HOM05D000133 ORTHO05D005274 1.5e-11 72.8 73 54.8
A06p20180 Brassica napus HOM05D000133 ORTHO05D005274 1.5e-11 72.8 73 54.8
C03p71610 Brassica napus HOM05D000133 ORTHO05D005274 1.5e-11 72.8 73 54.8
BolC3t19452H Brassica oleracea HOM05D000133 ORTHO05D005274 1.5e-11 72.8 73 54.8
BraA06t25102Z Brassica rapa HOM05D000133 ORTHO05D005274 1.5e-11 72.8 73 54.8
Carub.0005s1356 Capsella rubella HOM05D000133 ORTHO05D005274 1.5e-11 72.8 73 54.8
CARHR156110 Cardamine hirsuta HOM05D000133 ORTHO05D005274 1.5e-11 72.8 73 54.8
Thhalv10010659m.g Eutrema salsugineum HOM05D000133 ORTHO05D005274 1.5e-11 72.8 73 54.8
Manes.14G079800 Manihot esculenta HOM05D000133 ORTHO05D005274 1.5e-11 72.8 73 54.8
PSO017G0316 Papaver somniferum HOM05D000133 ORTHO05D005274 1.5e-11 72.8 73 54.8
PSO478G0618 Papaver somniferum HOM05D000133 ORTHO05D005274 1.5e-11 72.8 73 54.8
PGR044G1636 Punica granatum HOM05D000133 ORTHO05D005274 1.5e-11 72.8 73 54.8
Sp5g14410 Schrenkiella parvula HOM05D000133 ORTHO05D005274 1.5e-11 72.8 73 54.8
Sc12g0006440 Simmondsia chinensis HOM05D000133 ORTHO05D005274 1.5e-11 72.8 73 53.4
THA.LOC104819448 Tarenaya hassleriana HOM05D000133 ORTHO05D005274 1.5e-11 72.8 73 54.8
Cc04_g16410 Coffea canephora HOM05D000133 ORTHO05D005274 2.0e-11 72.4 73 53.4
FvH4_5g14770 Fragaria vesca HOM05D000133 ORTHO05D005274 2.0e-11 72.4 73 54.8
FAN04G1142 Fragaria x ananassa HOM05D000133 ORTHO05D005274 2.0e-11 72.4 73 54.8
FAN08G1010 Fragaria x ananassa HOM05D000133 ORTHO05D005274 2.0e-11 72.4 73 54.8
FAN13G2146 Fragaria x ananassa HOM05D000133 ORTHO05D005274 2.0e-11 72.4 73 54.8
FAN18G3450 Fragaria x ananassa HOM05D000133 ORTHO05D005274 2.0e-11 72.4 73 54.8
Lj9A465T66 Lonicera japonica HOM05D000133 ORTHO05D005274 2.0e-11 72.4 73 53.4
MBI05_g10772_MAGBIO Magnolia biondii HOM05D000133 ORTHO05D005274 2.0e-11 72.4 73 53.4
Manes.06G091400 Manihot esculenta HOM05D000133 ORTHO05D005274 2.0e-11 72.4 73 53.4
Nitab4.5_0001128g0010 Nicotiana tabacum HOM05D000133 ORTHO05D005274 2.0e-11 72.4 73 53.4
Solyc03g115900.4 Solanum lycopersicum HOM05D000133 ORTHO05D005274 2.0e-11 72.4 73 53.4
Sopen03g034880 Solanum pennellii HOM05D000133 ORTHO05D005274 2.0e-11 72.4 73 53.4
AL5G26690 Arabidopsis lyrata HOM05D000133 ORTHO05D005274 2.6e-11 72.0 73 53.4
CSS0009796 Camellia sinensis var. sinensis HOM05D000133 ORTHO05D005274 2.6e-11 72.0 73 53.4
Haze_07311 Corylus avellana HOM05D000133 ORTHO05D005274 2.6e-11 72.0 73 53.4
Migut.D01806 Erythranthe guttata HOM05D000133 ORTHO05D005274 2.6e-11 72.0 73 53.4
Dinv10642 Davidia involucrata HOM05D000133 ORTHO05D005274 3.4e-11 71.6 73 53.4
Lj1g0025178 Lotus japonicus HOM05D000133 ORTHO05D005274 3.4e-11 71.6 73 53.4
MD06G1195000 Malus domestica HOM05D000133 ORTHO05D005274 3.4e-11 71.6 73 53.4
Prupe.5G195100 Prunus persica HOM05D000133 ORTHO05D005274 3.4e-11 71.6 73 53.4
TAR622G1108 Trochodendron aralioides HOM05D000133 ORTHO05D005274 3.4e-11 71.6 73 53.4
Actinidia19035 Actinidia chinensis HOM05D000133 ORTHO05D005274 4.5e-11 71.2 73 53.4
EL10Ac5g11034 Beta vulgaris HOM05D000133 ORTHO05D005274 4.5e-11 71.2 73 53.4
Cfa018927 Carpinus fangiana HOM05D000133 ORTHO05D005274 4.5e-11 71.2 73 53.4
Glyma.06G194900 Glycine max HOM05D000133 ORTHO05D005274 4.5e-11 71.2 73 53.4
HanXRQChr05g0156091 Helianthus annuus HOM05D000133 ORTHO05D005274 4.5e-11 71.2 73 52.1
Hma1.2p1_0637F.1_g193640 Hydrangea macrophylla HOM05D000133 ORTHO05D005274 4.5e-11 71.2 73 52.1
Hma1.2p1_1619F.1_g293920 Hydrangea macrophylla HOM05D000133 ORTHO05D005274 4.5e-11 71.2 73 52.1
Sabra15G0087300 Salix brachista HOM05D000133 ORTHO05D005274 4.5e-11 71.2 73 53.4
Sed0017074 Sechium edule HOM05D000133 ORTHO05D005274 4.5e-11 71.2 73 53.4
THA.LOC104818262 Tarenaya hassleriana HOM05D000133 ORTHO05D005274 4.5e-11 71.2 73 53.4
TAR374G1585 Trochodendron aralioides HOM05D000133 ORTHO05D005274 4.5e-11 71.2 73 53.4
Atru.chr9.216 Acer truncatum HOM05D000133 ORTHO05D005274 5.9e-11 70.9 73 53.4
Aa31LG4G16270 Aethionema arabicum HOM05D000133 ORTHO05D005274 5.9e-11 70.9 73 53.4
arahy.Tifrunner.gnm1.ann1.N8DZQ8 Arachis hypogaea HOM05D000133 ORTHO05D005274 5.9e-11 70.9 73 53.4
arahy.Tifrunner.gnm1.ann1.RLTX4G Arachis hypogaea HOM05D000133 ORTHO05D005274 5.9e-11 70.9 73 53.4
Ca_11775_v3 Cicer arietinum L. HOM05D000133 ORTHO05D005274 5.9e-11 70.9 73 53.4
DCAR_026060 Daucus carota HOM05D000133 ORTHO05D005274 5.9e-11 70.9 73 52.1
Medtr3g435460 Medicago truncatula HOM05D000133 ORTHO05D005274 5.9e-11 70.9 73 53.4
Psat5g200040 Pisum sativum HOM05D000133 ORTHO05D005274 5.9e-11 70.9 73 53.4
Sp2g25610 Schrenkiella parvula HOM05D000133 ORTHO05D005274 5.9e-11 70.9 73 53.4
Sed0020579 Sechium edule HOM05D000133 ORTHO05D005274 5.9e-11 70.9 73 53.4
THA.LOC104821416 Tarenaya hassleriana HOM05D000133 ORTHO05D005274 5.9e-11 70.9 73 53.4
TWI15G1189 Tripterygium wilfordii HOM05D000133 ORTHO05D005274 5.9e-11 70.9 73 53.4
TWI60G1350 Tripterygium wilfordii HOM05D000133 ORTHO05D005274 5.9e-11 70.9 73 53.4
TWI81G0134 Tripterygium wilfordii HOM05D000133 ORTHO05D005274 5.9e-11 70.9 73 53.4
Actinidia04881 Actinidia chinensis HOM05D000133 ORTHO05D005274 7.7e-11 70.5 73 52.1
CAN.G837.30 Capsicum annuum HOM05D000133 ORTHO05D005274 7.7e-11 70.5 73 52.1
ECA246G1896 Erigeron canadensis HOM05D001256 ORTHO05D005274 7.7e-11 70.5 73 52.1
Nitab4.5_0005766g0010 Nicotiana tabacum HOM05D000133 ORTHO05D005274 7.7e-11 70.5 73 52.1
Phvul.009G186500 Phaseolus vulgaris HOM05D000133 ORTHO05D005274 7.7e-11 70.5 73 52.1
PGSC0003DMG400019508 Solanum tuberosum HOM05D000133 ORTHO05D005274 7.7e-11 70.5 73 52.1
CANSAT80G1239 Cannabis sativa HOM05D000133 ORTHO05D005274 1.0e-10 70.1 73 52.1
Duzib068G0637 Durio zibethinus HOM05D000133 ORTHO05D005274 1.0e-10 70.1 73 52.1
ECA232G3702 Erigeron canadensis HOM05D000133 ORTHO05D005274 1.0e-10 70.1 73 52.1
Lsat_1_v5_gn_4_109340 Lactuca sativa HOM05D000133 ORTHO05D005274 1.0e-10 70.1 73 52.1
Lsat_1_v5_gn_9_27081 Lactuca sativa HOM05D000133 ORTHO05D005274 1.0e-10 70.1 73 50.7
SalBow3G0073 Salvia bowleyana HOM05D000133 ORTHO05D005274 1.0e-10 70.1 73 52.1
SGA_v2.0_scaffold7G04061 Striga asiatica HOM05D003031 ORTHO05D005274 1.0e-10 70.1 73 52.1
CARHR276220 Cardamine hirsuta HOM05D000133 ORTHO05D005274 1.3e-10 69.7 73 52.1
Solyc06g069730.3 Solanum lycopersicum HOM05D000133 ORTHO05D005274 1.3e-10 69.7 73 50.7
Zm00001eb041460 Zea mays HOM05D000133 ORTHO05D005274 1.3e-10 69.7 73 50.7
Zm00001eb179680 Zea mays HOM05D000133 ORTHO05D005274 1.3e-10 69.7 73 50.7
CiPaw.11G046100 Carya illinoinensis HOM05D000133 ORTHO05D005274 1.7e-10 69.3 73 52.1
ClCG06G016140 Citrullus lanatus HOM05D000133 ORTHO05D005274 1.7e-10 69.3 73 52.1
COL.COLO4_36687 Corchorus olitorius HOM05D000133 ORTHO05D005274 1.7e-10 69.3 73 52.1
MELO3C017180.2 Cucumis melo HOM05D000133 ORTHO05D005274 1.7e-10 69.3 73 52.1
CsaV3_1G002410 Cucumis sativus L. HOM05D000133 ORTHO05D005274 1.7e-10 69.3 73 52.1
CsaV3_1G005600 Cucumis sativus L. HOM05D000133 ORTHO05D005274 1.7e-10 69.3 73 52.1
Gohir.A07G065900 Gossypium hirsutum HOM05D000133 ORTHO05D005274 1.7e-10 69.3 73 52.1
Gohir.D07G070400 Gossypium hirsutum HOM05D000133 ORTHO05D005274 1.7e-10 69.3 73 52.1
Gorai.001G074300 Gossypium raimondii HOM05D000133 ORTHO05D005274 1.7e-10 69.3 73 52.1
Lj5A110G119 Lonicera japonica HOM05D000133 ORTHO05D005274 1.7e-10 69.3 73 49.3
MD14G1202000 Malus domestica HOM05D000133 ORTHO05D005274 1.7e-10 69.3 73 50.7
Nitab4.5_0004286g0030 Nicotiana tabacum HOM05D000133 ORTHO05D005274 1.7e-10 69.3 73 50.7
Nitab4.5_0007189g0010 Nicotiana tabacum HOM05D000133 ORTHO05D005274 1.7e-10 69.3 73 50.7
Peaxi162Scf00013g00432 Petunia axillaris HOM05D000133 ORTHO05D005274 1.7e-10 69.3 73 50.7
Potri.015G062200 Populus trichocarpa HOM05D000133 ORTHO05D005274 1.7e-10 69.3 73 52.1
QL10p017295 Quercus lobata HOM05D000133 ORTHO05D005274 1.7e-10 69.3 73 52.1
Sed0017878 Sechium edule HOM05D000133 ORTHO05D005274 1.7e-10 69.3 73 52.1
Thecc.03G090600 Theobroma cacao HOM05D000133 ORTHO05D005274 1.7e-10 69.3 73 52.1
Aa31LG11G1200 Aethionema arabicum HOM05D000133 ORTHO05D005274 2.2e-10 68.9 73 52.1
CAN.G587.6 Capsicum annuum HOM05D000133 ORTHO05D005274 2.2e-10 68.9 73 49.3
CiPaw.12G012600 Carya illinoinensis HOM05D000133 ORTHO05D005274 2.2e-10 68.9 73 52.1
AUR62008430 Chenopodium quinoa HOM05D000133 ORTHO05D005274 2.2e-10 68.9 73 52.1
AUR62021663 Chenopodium quinoa HOM05D000133 ORTHO05D005274 2.2e-10 68.9 73 52.1
Sopen06g027030 Solanum pennellii HOM05D000133 ORTHO05D005274 2.2e-10 68.9 73 49.3
VMungo1309G1150 Vigna mungo HOM05D000133 ORTHO05D005274 2.2e-10 68.9 73 50.7
Gohir.A12G178300 Gossypium hirsutum HOM05D000133 ORTHO05D005274 2.9e-10 68.6 73 50.7
Gohir.D12G180700 Gossypium hirsutum HOM05D000133 ORTHO05D005274 2.9e-10 68.6 73 50.7
Gorai.008G194000 Gossypium raimondii HOM05D000133 ORTHO05D005274 2.9e-10 68.6 73 50.7
ClCG04G012170 Citrullus lanatus HOM05D000133 ORTHO05D005274 3.8e-10 68.2 73 50.7
PGSC0003DMG400033084 Solanum tuberosum HOM05D000133 ORTHO05D005274 3.8e-10 68.2 73 49.3
Glyma.04G167900 Glycine max HOM05D000133 ORTHO05D005274 5.0e-10 67.8 73 50.7
unitig_37.g12727 Utricularia gibba HOM05D000133 ORTHO05D005274 5.0e-10 67.8 73 50.7
SEGI_24437 Sequoiadendron giganteum HOM05D000133 ORTHO05D005274 6.5e-10 67.4 73 49.3
Rhsim12G0155700 Rhododendron simsii HOM05D000133 ORTHO05D005274 8.5e-10 67.0 73 50.7
vmacro16542 Vaccinium macrocarpon HOM05D000133 ORTHO05D005274 8.5e-10 67.0 73 49.3
SMO356G0155 Selaginella moellendorffii HOM05D000133 ORTHO05D005274 1.1e-09 66.6 73 46.6
Hma1.2p1_0060F.1_g033660 Hydrangea macrophylla HOM05D000133 ORTHO05D005274 4.2e-09 64.7 73 49.3
Mapoly0006s0261 Marchantia polymorpha HOM05D000133 ORTHO05D005274 4.2e-09 64.7 73 47.9
CSS0038112 Camellia sinensis var. sinensis HOM05D000133 ORTHO05D005274 1.6e-08 62.8 62 56.5
AagrBONN_evm.TU.Sc2ySwM_228.2598 Anthoceros agrestis HOM05D000133 ORTHO05D005274 3.9e-07 58.2 72 43.1
Cpa.g.sc111.16 Carica papaya HOM05D000133 ORTHO05D005274 3.9e-07 58.2 61 49.2


User provided reference genes

Program Settings