Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g14392 Nelumbo nucifera HOM05D000636 ORTHO05D009705 1.3e-57 226.1 109 100.0
Nn2g11186 Nelumbo nucifera HOM05D000636 ORTHO05D009705 1.7e-20 102.8 53 94.3
Nn4g25855 Nelumbo nucifera HOM05D000636 ORTHO05D009705 2.8e-20 102.1 53 96.2
Nn4g25884 Nelumbo nucifera HOM05D000636 ORTHO05D009705 1.1e-19 100.1 53 94.3
Nn6g34280 Nelumbo nucifera HOM05D000636 ORTHO05D009705 1.6e-18 96.3 50 94.0
Actinidia20706 Actinidia chinensis HOM05D000636 ORTHO05D009705 2.9e-12 75.5 56 67.9
Thecc.04G035500 Theobroma cacao HOM05D000636 ORTHO05D009705 1.9e-11 72.8 57 63.2
Gohir.A07G228050 Gossypium hirsutum HOM05D000636 ORTHO05D009705 2.4e-11 72.4 57 61.4
ATR0561G174 Amborella trichopoda HOM05D000636 ORTHO05D009705 5.4e-11 71.2 59 66.1
MBI11_g07464_MAGBIO Magnolia biondii HOM05D000636 ORTHO05D009705 7.0e-11 70.9 52 65.4
Nn3g18262 Nelumbo nucifera HOM05D000636 ORTHO05D009705 1.2e-10 70.1 37 97.3
Nn1g09241 Nelumbo nucifera HOM05D000636 ORTHO05D009705 2.0e-10 69.3 39 92.3
Nn4g22344 Nelumbo nucifera HOM05D000636 ORTHO05D009705 2.7e-10 68.9 53 69.8
PSO017G0561 Papaver somniferum HOM05D000636 ORTHO05D009705 3.5e-10 68.6 56 57.1
Gohir.D07G235200 Gossypium hirsutum HOM05D000636 ORTHO05D009705 6.0e-10 67.8 57 57.9
PSO478G3395 Papaver somniferum HOM05D000636 ORTHO05D009705 1.7e-09 66.2 56 55.4
Haze_14870 Corylus avellana HOM05D000001 ORTHO05D009705 3.0e-09 65.5 52 57.7
CANSAT64G1400 Cannabis sativa HOM05D000636 ORTHO05D009705 6.6e-09 64.3 52 55.8
Eucgr.I01650 Eucalyptus grandis HOM05D000636 ORTHO05D009705 8.6e-09 63.9 54 61.1
SalBow4G0101 Salvia bowleyana HOM05D000636 ORTHO05D009705 1.1e-08 63.5 61 57.4
Cpa.g.sc171.19 Carica papaya HOM05D000636 ORTHO05D009705 2.5e-08 62.4 52 53.8
Gorai.001G270900 Gossypium raimondii HOM05D000636 ORTHO05D009705 4.3e-08 61.6 60 56.7
Lj6C825T12 Lonicera japonica HOM05D000636 ORTHO05D009705 4.3e-08 61.6 50 62.0
Nn4g22345 Nelumbo nucifera HOM05D000636 ORTHO05D009705 4.3e-08 61.6 62 48.4
Gohir.D07G235100 Gossypium hirsutum HOM05D000636 ORTHO05D009705 7.3e-08 60.8 60 55.0
CsaV3_3G027040 Cucumis sativus L. HOM05D000636 ORTHO05D009705 9.5e-08 60.5 52 55.8
MELO3C014881.2 Cucumis melo HOM05D000636 ORTHO05D009705 1.2e-07 60.1 52 55.8
Oeu058780.1 Olea europaea HOM05D000001 ORTHO05D009705 1.2e-07 60.1 72 44.4
PGR142G4139 Punica granatum HOM05D000636 ORTHO05D009705 1.2e-07 60.1 54 59.3
ClCG05G013470 Citrullus lanatus HOM05D000636 ORTHO05D009705 1.6e-07 59.7 53 58.5
Sed0011370 Sechium edule HOM05D000636 ORTHO05D009705 1.6e-07 59.7 52 55.8
Duzib187G1190 Durio zibethinus HOM05D000636 ORTHO05D009705 2.8e-07 58.9 56 50.0
Migut.F00067 Erythranthe guttata HOM05D000001 ORTHO05D009705 2.8e-07 58.9 83 42.2
Gohir.A07G228000 Gossypium hirsutum HOM05D000636 ORTHO05D009705 2.8e-07 58.9 60 55.0
Atru.chr6.2565 Acer truncatum HOM05D000636 ORTHO05D009705 3.6e-07 58.5 52 57.7
COL.COLO4_17206 Corchorus olitorius HOM05D000636 ORTHO05D009705 4.7e-07 58.2 58 53.4
Ciclev10015578m.g Citrus clementina HOM05D000636 ORTHO05D009705 6.2e-07 57.8 52 55.8
CARHR199180 Cardamine hirsuta HOM05D000636 ORTHO05D009705 1.4e-06 56.6 52 48.1
Aa31LG11G14950 Aethionema arabicum HOM05D000636 ORTHO05D009705 1.8e-06 56.2 52 50.0
Carub.0006s1236 Capsella rubella HOM05D000636 ORTHO05D009705 2.3e-06 55.8 57 47.4
Nn5g30415 Nelumbo nucifera HOM05D000636 ORTHO05D009705 2.3e-06 55.8 30 93.3
BcaB01g05304 Brassica carinata HOM05D000636 ORTHO05D009705 3.1e-06 55.5 52 50.0
BcaB01g06340 Brassica carinata HOM05D000636 ORTHO05D009705 3.1e-06 55.5 52 48.1
A03p06470 Brassica napus HOM05D000636 ORTHO05D009705 3.1e-06 55.5 52 48.1
C03p07470 Brassica napus HOM05D000636 ORTHO05D009705 3.1e-06 55.5 52 50.0
BolC3t13248H Brassica oleracea HOM05D000636 ORTHO05D009705 3.1e-06 55.5 52 50.0
BraA03t09978Z Brassica rapa HOM05D000636 ORTHO05D009705 3.1e-06 55.5 52 48.1
CiPaw.03G055200 Carya illinoinensis HOM05D000636 ORTHO05D009705 3.1e-06 55.5 52 50.0
PSO455G0047 Papaver somniferum HOM05D000636 ORTHO05D009705 5.2e-06 54.7 51 52.9
SEGI_20728 Sequoiadendron giganteum HOM05D000636 ORTHO05D009705 5.2e-06 54.7 78 42.3
SGA_v2.0_scaffold9G04718 Striga asiatica HOM05D000636 ORTHO05D009705 6.8e-06 54.3 58 48.3
AT5G14150 Arabidopsis thaliana HOM05D000636 ORTHO05D009705 8.9e-06 53.9 52 46.2


User provided reference genes

Program Settings