Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g14390 Nelumbo nucifera HOM05D006703 ORTHO05D008389 3.2e-107 391.7 194 100.0
TAR636G3193 Trochodendron aralioides HOM05D004977 ORTHO05D006454 2.1e-74 282.7 190 72.1
Actinidia37767 Actinidia chinensis HOM05D006703 ORTHO05D008389 2.1e-58 229.6 198 59.1
GSVIVG01022605001 Vitis vinifera HOM05D006703 ORTHO05D008389 2.2e-55 219.5 197 57.4
DCAR_013453 Daucus carota HOM05D006703 ORTHO05D008389 1.1e-54 217.2 196 55.1
Hma1.2p1_0401F.1_g144790 Hydrangea macrophylla HOM05D006703 ORTHO05D008389 7.0e-54 214.5 199 57.3
TWI74G0187 Tripterygium wilfordii HOM05D006703 ORTHO05D008389 1.2e-53 213.8 211 52.1
Lj1A1058G53 Lonicera japonica HOM05D006703 ORTHO05D008389 4.5e-53 211.8 202 55.9
FAN05G3633 Fragaria x ananassa HOM05D006703 ORTHO05D008389 7.7e-53 211.1 203 54.7
Lj1g0009334 Lotus japonicus HOM05D006703 ORTHO05D008389 7.7e-53 211.1 207 58.0
Hund14986 Selenicereus undatus HOM05D006703 ORTHO05D008389 7.7e-53 211.1 196 51.5
FAN05G2374 Fragaria x ananassa HOM05D006703 ORTHO05D008389 1.0e-52 210.7 203 54.7
Lalb_Chr01g0017771 Lupinus albus HOM05D006703 ORTHO05D008389 1.0e-52 210.7 197 55.3
TPR.G34442 Trifolium pratense HOM05D006703 ORTHO05D008389 1.0e-52 210.7 207 55.6
EL10Ac5g11822 Beta vulgaris HOM05D006703 ORTHO05D008389 1.7e-52 209.9 198 53.0
Rhsim03G0062400 Rhododendron simsii HOM05D006703 ORTHO05D008389 1.7e-52 209.9 197 54.3
PSO017G1234 Papaver somniferum HOM05D006703 ORTHO05D008389 2.3e-52 209.5 206 56.3
RcHm_v2.0_Chr3g0477081 Rosa chinensis HOM05D006703 ORTHO05D008389 2.3e-52 209.5 203 54.7
TWI77G0507 Tripterygium wilfordii HOM05D006703 ORTHO05D008389 2.9e-52 209.1 199 53.3
Ah.12g059450 Amaranthus hybridus HOM05D001890 ORTHO05D003442 6.6e-52 208.0 200 51.5
FAN09G4763 Fragaria x ananassa HOM05D006703 ORTHO05D008389 6.6e-52 208.0 203 54.7
Eucgr.K01914 Eucalyptus grandis HOM05D006703 ORTHO05D008389 8.6e-52 207.6 202 54.0
Gohir.D01G190000 Gossypium hirsutum HOM05D006703 ORTHO05D008389 1.1e-51 207.2 194 53.6
Thecc.05G108700 Theobroma cacao HOM05D006703 ORTHO05D008389 2.5e-51 206.1 197 55.8
Gorai.002G233800 Gossypium raimondii HOM05D006703 ORTHO05D008389 4.3e-51 205.3 194 53.1
FAN14G3264 Fragaria x ananassa HOM05D006703 ORTHO05D008389 5.6e-51 204.9 203 54.2
Duzib106G1644 Durio zibethinus HOM05D006703 ORTHO05D008389 7.3e-51 204.5 196 55.1
Gohir.A01G200000 Gossypium hirsutum HOM05D006703 ORTHO05D008389 7.3e-51 204.5 194 54.1
Medtr7g106660 Medicago truncatula HOM05D006703 ORTHO05D008389 9.5e-51 204.1 202 54.0
Nitab4.5_0001918g0020 Nicotiana tabacum HOM05D006703 ORTHO05D008389 9.5e-51 204.1 202 52.5
FvH4_6g20830 Fragaria vesca HOM05D006703 ORTHO05D008389 1.2e-50 203.8 203 53.2
Prupe.7G090900 Prunus persica HOM05D006703 ORTHO05D008389 1.6e-50 203.4 197 52.8
Duzib093G0046 Durio zibethinus HOM05D006703 ORTHO05D008389 2.8e-50 202.6 193 54.4
EL10Ac9g21006 Beta vulgaris HOM05D006703 ORTHO05D008389 3.6e-50 202.2 198 52.5
AUR62030691 Chenopodium quinoa HOM05D006703 ORTHO05D008389 3.6e-50 202.2 198 50.0
QL07p026854 Quercus lobata HOM05D006703 ORTHO05D008389 3.6e-50 202.2 200 55.0
Cfa020082 Carpinus fangiana HOM05D006703 ORTHO05D008389 4.7e-50 201.8 196 53.1
Potri.016G066800 Populus trichocarpa HOM05D006703 ORTHO05D008389 1.0e-49 200.7 197 52.8
Nitab4.5_0000721g0180 Nicotiana tabacum HOM05D006703 ORTHO05D008389 2.3e-49 199.5 202 52.5
SGA_v2.0_scaffold31G12818 Striga asiatica HOM05D006703 ORTHO05D008389 3.0e-49 199.1 195 51.8
MBI05_g29094_MAGBIO Magnolia biondii HOM05D006703 ORTHO05D008389 4.0e-49 198.7 206 51.5
Hund10833 Selenicereus undatus HOM05D006703 ORTHO05D008389 4.0e-49 198.7 197 50.8
MELO3C009564.2 Cucumis melo HOM05D006703 ORTHO05D008389 5.2e-49 198.4 196 52.6
RcHm_v2.0_Chr3g0477171 Rosa chinensis HOM05D006703 ORTHO05D008389 6.8e-49 198.0 197 54.3
MSTRG.19329 Avicennia marina HOM05D006703 ORTHO05D008389 8.9e-49 197.6 199 52.3
Manes.08G036200 Manihot esculenta HOM05D006703 ORTHO05D008389 8.9e-49 197.6 200 53.5
Sed0010784 Sechium edule HOM05D006703 ORTHO05D008389 1.5e-48 196.8 201 50.7
Ca_09072_v3 Cicer arietinum L. HOM05D006703 ORTHO05D008389 2.0e-48 196.4 202 53.5
MD14G1043200 Malus domestica HOM05D006703 ORTHO05D008389 2.0e-48 196.4 198 52.0
ClCG10G018080 Citrullus lanatus HOM05D006703 ORTHO05D008389 2.6e-48 196.1 196 52.6
Sed0006927 Sechium edule HOM05D006703 ORTHO05D008389 3.4e-48 195.7 196 51.5
HanXRQChr02g0052921 Helianthus annuus HOM05D006703 ORTHO05D008389 4.4e-48 195.3 197 51.8
ECA233G5710 Erigeron canadensis HOM05D006703 ORTHO05D008389 5.7e-48 194.9 209 49.8
HanXRQChr13g0398671 Helianthus annuus HOM05D006703 ORTHO05D008389 5.7e-48 194.9 208 48.6
MD12G1044300 Malus domestica HOM05D006703 ORTHO05D008389 7.5e-48 194.5 197 50.3
Sabra16G0068200 Salix brachista HOM05D006703 ORTHO05D008389 9.8e-48 194.1 197 50.8
CiPaw.10G019700 Carya illinoinensis HOM05D006703 ORTHO05D008389 1.7e-47 193.4 196 50.0
arahy.Tifrunner.gnm1.ann1.W58RTV Arachis hypogaea HOM05D006703 ORTHO05D008389 4.9e-47 191.8 211 51.7
Sc22g0003150 Simmondsia chinensis HOM05D006703 ORTHO05D008389 4.9e-47 191.8 194 51.5
Atru.chr8.1299 Acer truncatum HOM05D006703 ORTHO05D008389 6.4e-47 191.4 171 55.6
arahy.Tifrunner.gnm1.ann1.8DDT0E Arachis hypogaea HOM05D006703 ORTHO05D008389 6.4e-47 191.4 211 51.2
CsaV3_3G038210 Cucumis sativus L. HOM05D006703 ORTHO05D008389 6.4e-47 191.4 198 50.5
Haze_20110 Corylus avellana HOM05D006703 ORTHO05D008389 1.1e-46 190.7 172 54.7
CiPaw.09G023100 Carya illinoinensis HOM05D006703 ORTHO05D008389 1.4e-46 190.3 196 50.0
Aqoxy1G00585 Aquilegia oxysepala HOM05D006703 ORTHO05D008389 2.4e-46 189.5 203 49.3
ATR0697G151 Amborella trichopoda HOM05D006703 ORTHO05D008389 4.1e-46 188.7 204 52.0
Manes.09G042800 Manihot esculenta HOM05D006703 ORTHO05D008389 4.1e-46 188.7 195 51.8
Sopen10g032260 Solanum pennellii HOM05D006703 ORTHO05D008389 7.0e-46 188.0 188 53.2
PGSC0003DMG400028230 Solanum tuberosum HOM05D006703 ORTHO05D008389 9.2e-46 187.6 202 50.5
COL.COLO4_29515 Corchorus olitorius HOM05D006703 ORTHO05D008389 1.2e-45 187.2 197 52.8
FAN02G3199 Fragaria x ananassa HOM05D006703 ORTHO05D008389 1.7e-44 183.3 161 57.1
CANSAT64G1940 Cannabis sativa HOM05D006703 ORTHO05D008389 6.6e-44 181.4 199 47.2
Oeu020165.3 Olea europaea HOM05D006703 ORTHO05D008389 6.6e-44 181.4 243 45.3
Psat3g028120 Pisum sativum HOM05D006703 ORTHO05D008389 1.1e-43 180.6 199 52.8
MSTRG.26583 Avicennia marina HOM05D006703 ORTHO05D008389 2.5e-43 179.5 194 51.0
Solyc10g081750.1 Solanum lycopersicum HOM05D006703 ORTHO05D008389 2.5e-43 179.5 188 50.5
vmacro07494 Vaccinium macrocarpon HOM05D006703 ORTHO05D008389 2.1e-42 176.4 287 39.0
Peaxi162Scf00203g00910 Petunia axillaris HOM05D006703 ORTHO05D008389 2.8e-42 176.0 192 50.5
Phvul.001G197500 Phaseolus vulgaris HOM05D006703 ORTHO05D008389 6.2e-42 174.9 197 48.2
PGR004G0398 Punica granatum HOM05D006703 ORTHO05D008389 3.1e-41 172.6 184 50.0
Zm00001eb151930 Zea mays HOM05D006703 ORTHO05D008389 4.0e-41 172.2 196 47.4
Cc06_g06870 Coffea canephora HOM05D006703 ORTHO05D008389 2.0e-40 169.9 230 44.3
VMungo1383G2242 Vigna mungo HOM05D001890 ORTHO05D003442 2.6e-40 169.5 196 48.0
Os01g0771200 Oryza sativa ssp. japonica HOM05D006703 ORTHO05D008389 3.4e-40 169.1 208 45.2
AUR62036335 Chenopodium quinoa HOM05D006703 ORTHO05D008389 1.4e-38 163.7 189 44.4
Glyma.03G204000 Glycine max HOM05D006703 ORTHO05D008389 3.2e-38 162.5 202 46.0
CDE10G0766 Ceratophyllum demersum HOM05D006703 ORTHO05D008389 2.0e-37 159.8 141 58.2
SGA_v2.0_scaffold392G50677 Striga asiatica HOM05D006703 ORTHO05D008389 6.0e-37 158.3 196 45.9
Thhalv10017281m.g Eutrema salsugineum HOM05D006703 ORTHO05D008389 7.8e-37 157.9 204 44.1
Migut.J00741 Erythranthe guttata HOM05D006703 ORTHO05D008389 1.7e-36 156.8 207 46.4
BolC4t27966H Brassica oleracea HOM05D006703 ORTHO05D008389 2.3e-36 156.4 205 42.0
BcaC02g07656 Brassica carinata HOM05D006703 ORTHO05D008389 3.9e-36 155.6 205 42.0
C04p64910 Brassica napus HOM05D006703 ORTHO05D008389 6.6e-36 154.8 205 42.0
BraA04t18236Z Brassica rapa HOM05D006703 ORTHO05D008389 6.6e-36 154.8 205 42.4
CARHR130150 Cardamine hirsuta HOM05D006703 ORTHO05D008389 2.5e-35 152.9 201 45.3
A04p27380 Brassica napus HOM05D006703 ORTHO05D008389 4.3e-35 152.1 205 42.0
AL4G32000 Arabidopsis lyrata HOM05D006703 ORTHO05D008389 1.6e-34 150.2 206 44.2
Aa31LG5G21040 Aethionema arabicum HOM05D006703 ORTHO05D008389 2.1e-34 149.8 202 41.6
BraA03t11234Z Brassica rapa HOM05D006703 ORTHO05D008389 2.8e-34 149.4 199 42.7
C03p23140 Brassica napus HOM05D006703 ORTHO05D008389 4.7e-34 148.7 199 44.2
BcaB06g28891 Brassica carinata HOM05D006703 ORTHO05D008389 6.2e-34 148.3 204 42.6
AT2G35900 Arabidopsis thaliana HOM05D006703 ORTHO05D008389 1.1e-33 147.5 206 42.2
A03p19820 Brassica napus HOM05D006703 ORTHO05D008389 1.1e-33 147.5 199 43.2
Carub.0004s1765 Capsella rubella HOM05D006703 ORTHO05D008389 2.3e-33 146.4 203 44.3
Sp4g18150 Schrenkiella parvula HOM05D006703 ORTHO05D008389 5.2e-33 145.2 204 40.2
BcaC01g05692 Brassica carinata HOM05D006703 ORTHO05D008389 1.2e-32 144.1 201 43.3
BolC3t14715H Brassica oleracea HOM05D006703 ORTHO05D008389 1.2e-32 144.1 201 43.3
THA.LOC104823512 Tarenaya hassleriana HOM05D006703 ORTHO05D008389 3.4e-32 142.5 199 42.2
Actinidia03970 Actinidia chinensis HOM05D006703 ORTHO05D008389 2.2e-31 139.8 159 49.7
unitig_749.g14212 Utricularia gibba HOM05D006703 ORTHO05D008389 2.2e-31 139.8 167 46.1
Actinidia03862 Actinidia chinensis HOM05D006703 ORTHO05D008389 3.7e-31 139.0 125 57.6
Dinv25069 Davidia involucrata HOM05D001890 ORTHO05D003442 9.2e-30 134.4 130 56.9
CDE10G0313 Ceratophyllum demersum HOM05D006703 ORTHO05D001378 1.9e-19 100.1 130 43.1
Oeu045018.1 Olea europaea HOM05D006703 ORTHO05D008389 3.6e-18 95.9 88 52.3
Dinv16712 Davidia involucrata HOM05D006703 ORTHO05D008389 3.4e-16 89.4 67 68.7
SHI28311 Sapria himalayana HOM05D006703 ORTHO05D008389 7.8e-13 78.2 124 39.5
SEGI_14783 Sequoiadendron giganteum HOM05D000064 ORTHO05D008389 7.3e-11 71.6 54 57.4
AagrBONN_evm.TU.Sc2ySwM_369.455 Anthoceros agrestis HOM05D006703 ORTHO05D008389 1.3e-10 70.9 120 36.7
Glyma.19G201366 Glycine max HOM05D006703 ORTHO05D008389 1.4e-09 67.4 121 37.2
SEGI_41401 Sequoiadendron giganteum HOM05D006703 ORTHO05D008389 5.3e-09 65.5 45 60.0
Pp3c9_17430 Physcomitrium patens HOM05D006703 ORTHO05D008389 9.9e-08 61.2 96 38.5
Sc17g0001990 Simmondsia chinensis HOM05D006703 ORTHO05D008389 2.4e-06 56.6 56 51.8


User provided reference genes

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