Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g14368 Nelumbo nucifera HOM05D006565 ORTHO05D008717 1.0e-207 726.5 364 100.0
TAR636G0179 Trochodendron aralioides HOM05D006565 ORTHO05D008717 3.5e-147 525.4 349 74.8
Actinidia34736 Actinidia chinensis HOM05D006565 ORTHO05D008717 6.4e-133 478.0 344 70.1
CiPaw.14G036000 Carya illinoinensis HOM05D006565 ORTHO05D008717 7.0e-132 474.6 321 73.5
Ciclev10015763m.g Citrus clementina HOM05D006565 ORTHO05D008717 9.2e-132 474.2 321 73.8
GSVIVG01034599001 Vitis vinifera HOM05D006565 ORTHO05D008717 1.0e-130 470.7 321 73.5
QL04p048612 Quercus lobata HOM05D006565 ORTHO05D008717 1.5e-129 466.8 348 69.3
Prupe.2G073700 Prunus persica HOM05D006565 ORTHO05D008717 3.3e-129 465.7 337 69.1
vmacro10331 Vaccinium macrocarpon HOM05D006565 ORTHO05D008717 4.3e-129 465.3 354 69.2
Aqoxy1G00616 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 5.6e-129 464.9 324 72.8
RcHm_v2.0_Chr1g0332191 Rosa chinensis HOM05D006565 ORTHO05D008717 1.6e-128 463.4 331 70.7
PSO339G2240 Papaver somniferum HOM05D006565 ORTHO05D008717 2.8e-128 462.6 358 66.8
MD07G1062700 Malus domestica HOM05D006565 ORTHO05D008717 8.9e-127 457.6 341 68.3
Duzib114G0050 Durio zibethinus HOM05D006565 ORTHO05D008717 1.5e-126 456.8 290 77.2
Thecc.10G119100 Theobroma cacao HOM05D006565 ORTHO05D008717 7.5e-126 454.5 352 66.5
Potri.010G243900 Populus trichocarpa HOM05D006565 ORTHO05D008717 1.7e-125 453.4 362 66.6
Rhsim09G0140500 Rhododendron simsii HOM05D006565 ORTHO05D008717 1.7e-125 453.4 358 66.8
Dinv03812 Davidia involucrata HOM05D006565 ORTHO05D008717 2.9e-125 452.6 351 66.4
FvH4_7g05460 Fragaria vesca HOM05D006565 ORTHO05D008717 2.9e-125 452.6 292 73.6
Glyma.20G195000 Glycine max HOM05D006565 ORTHO05D008717 3.7e-125 452.2 348 67.8
Atru.chr12.1084 Acer truncatum HOM05D006565 ORTHO05D008717 2.4e-124 449.5 293 75.4
arahy.Tifrunner.gnm1.ann1.V0HLME Arachis hypogaea HOM05D006565 ORTHO05D008717 2.4e-124 449.5 292 75.7
Eucgr.G02667 Eucalyptus grandis HOM05D006565 ORTHO05D008717 2.4e-124 449.5 314 71.7
TPR.G10259 Trifolium pratense HOM05D006565 ORTHO05D008717 3.2e-124 449.1 350 67.1
arahy.Tifrunner.gnm1.ann1.51BCJ8 Arachis hypogaea HOM05D006565 ORTHO05D008717 4.1e-124 448.7 292 75.3
Gorai.009G302300 Gossypium raimondii HOM05D006565 ORTHO05D008717 2.1e-123 446.4 316 69.9
Lj5g0019410 Lotus japonicus HOM05D006565 ORTHO05D008717 2.3e-122 443.0 318 70.8
Sc07g0003130 Simmondsia chinensis HOM05D006565 ORTHO05D008717 3.0e-122 442.6 349 64.8
Gohir.A05G286300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 6.6e-122 441.4 302 71.2
Gohir.D05G287300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 6.6e-122 441.4 316 69.3
Manes.10G059200 Manihot esculenta HOM05D006565 ORTHO05D008717 8.6e-122 441.0 317 68.5
MELO3C012330.2 Cucumis melo HOM05D006565 ORTHO05D008717 1.5e-121 440.3 344 67.7
Lalb_Chr06g0169851 Lupinus albus HOM05D006565 ORTHO05D008717 3.3e-121 439.1 327 67.3
HPP92_013938 Vanilla planifolia HOM05D006565 ORTHO05D008717 2.1e-120 436.4 290 74.5
ClCG05G021990 Citrullus lanatus HOM05D006565 ORTHO05D008717 2.8e-120 436.0 344 67.2
Ca_10426_v3 Cicer arietinum L. HOM05D006565 ORTHO05D008717 4.7e-120 435.3 347 66.0
CsaV3_5G035170 Cucumis sativus L. HOM05D006565 ORTHO05D008717 4.7e-120 435.3 315 71.4
Medtr1g090380 Medicago truncatula HOM05D006565 ORTHO05D008717 8.1e-120 434.5 289 74.4
Sabra10G0190700 Salix brachista HOM05D006565 ORTHO05D008717 4.0e-119 432.2 401 59.1
VMungo0720G0186 Vigna mungo HOM05D006565 ORTHO05D008717 8.9e-119 431.0 311 69.5
TWI15G0448 Tripterygium wilfordii HOM05D006565 ORTHO05D008717 1.2e-118 430.6 310 70.6
A03p21520 Brassica napus HOM05D006565 ORTHO05D008717 5.8e-118 428.3 355 62.8
Solyc11g006420.2 Solanum lycopersicum HOM05D006565 ORTHO05D008717 7.6e-118 427.9 340 63.2
ATR0697G221 Amborella trichopoda HOM05D006565 ORTHO05D008717 9.9e-118 427.6 286 72.7
Sopen11g002320 Solanum pennellii HOM05D006565 ORTHO05D008717 9.9e-118 427.6 296 69.3
COL.COLO4_10008 Corchorus olitorius HOM05D006565 ORTHO05D008717 2.2e-117 426.4 303 71.9
RhsimUnG0215000 Rhododendron simsii HOM05D006565 ORTHO05D008717 2.2e-117 426.4 417 57.6
CANSAT56G1291 Cannabis sativa HOM05D006565 ORTHO05D008717 2.9e-117 426.0 320 69.7
Cc02_g09290 Coffea canephora HOM05D006565 ORTHO05D008717 3.8e-117 425.6 295 71.2
Dinv06042 Davidia involucrata HOM05D006565 ORTHO05D008717 3.8e-117 425.6 275 76.4
HanXRQChr08g0217341 Helianthus annuus HOM05D006565 ORTHO05D008717 4.9e-117 425.2 322 68.0
SGA_v2.0_scaffold90G27708 Striga asiatica HOM05D006565 ORTHO05D008717 1.4e-116 423.7 301 70.8
Os03g0648900 Oryza sativa ssp. japonica HOM05D006565 ORTHO05D008717 3.2e-116 422.5 287 72.5
ECA233G2794 Erigeron canadensis HOM05D006565 ORTHO05D008717 4.2e-116 422.2 294 71.1
Lj3A921T38 Lonicera japonica HOM05D006565 ORTHO05D008717 4.2e-116 422.2 285 74.4
Carub.0004s2066 Capsella rubella HOM05D006565 ORTHO05D008717 5.4e-116 421.8 350 61.7
CARHR133350 Cardamine hirsuta HOM05D006565 ORTHO05D008717 7.1e-116 421.4 293 70.3
EL10Ac4g08734 Beta vulgaris HOM05D006565 ORTHO05D008717 1.2e-115 420.6 292 70.9
Migut.F00832 Erythranthe guttata HOM05D006565 ORTHO05D008717 2.1e-115 419.9 296 70.9
Thhalv10016992m.g Eutrema salsugineum HOM05D006565 ORTHO05D008717 2.7e-115 419.5 291 70.8
Psat6g171600 Pisum sativum HOM05D006565 ORTHO05D008717 4.6e-115 418.7 349 62.8
MSTRG.9025 Avicennia marina HOM05D006565 ORTHO05D008717 6.0e-115 418.3 296 70.3
Peaxi162Scf00120g01317 Petunia axillaris HOM05D006565 ORTHO05D008717 7.8e-115 417.9 333 62.8
Sp4g21020 Schrenkiella parvula HOM05D006565 ORTHO05D008717 1.0e-114 417.5 287 71.8
CAN.G143.52 Capsicum annuum HOM05D006565 ORTHO05D008717 3.9e-114 415.6 321 63.6
AUR62034160 Chenopodium quinoa HOM05D006565 ORTHO05D008717 8.7e-114 414.5 287 70.4
HanXRQChr02g0049321 Helianthus annuus HOM05D006565 ORTHO05D008717 8.7e-114 414.5 291 70.4
Sed0004638 Sechium edule HOM05D006565 ORTHO05D008717 8.7e-114 414.5 302 70.5
THA.LOC104801973 Tarenaya hassleriana HOM05D006565 ORTHO05D008717 8.7e-114 414.5 308 69.2
AUR62014278 Chenopodium quinoa HOM05D006565 ORTHO05D008717 1.1e-113 414.1 287 70.7
PGSC0003DMG400014108 Solanum tuberosum HOM05D006565 ORTHO05D008717 1.5e-113 413.7 296 67.6
AT2G38680 Arabidopsis thaliana HOM05D006565 ORTHO05D008717 2.5e-113 412.9 292 69.5
Zm00001eb218510 Zea mays HOM05D006565 ORTHO05D008717 4.3e-113 412.1 287 70.0
Hund06810 Selenicereus undatus HOM05D006565 ORTHO05D008717 1.4e-111 407.1 293 71.0
BraA03t11388Z Brassica rapa HOM05D006565 ORTHO05D008717 5.8e-110 401.7 336 63.1
Phvul.007G137100 Phaseolus vulgaris HOM05D006565 ORTHO05D008717 1.7e-109 400.2 312 64.4
BolC3t14938H Brassica oleracea HOM05D006565 ORTHO05D008717 7.1e-108 394.8 288 66.0
Lsat_1_v5_gn_8_21800 Lactuca sativa HOM05D006565 ORTHO05D008717 1.6e-107 393.7 297 67.7
C03p25510 Brassica napus HOM05D006565 ORTHO05D008717 3.5e-107 392.5 315 62.5
Nitab4.5_0001781g0210 Nicotiana tabacum HOM05D006565 ORTHO05D008717 1.1e-105 387.5 279 68.5
CDE06G1733 Ceratophyllum demersum HOM05D006565 ORTHO05D008717 8.1e-104 381.3 271 72.0
Oeu009252.1 Olea europaea HOM05D006565 ORTHO05D008717 1.7e-101 373.6 324 61.4
SEGI_36612 Sequoiadendron giganteum HOM05D006565 ORTHO05D008717 1.9e-100 370.2 268 67.5
AagrBONN_evm.TU.Sc2ySwM_228.2835 Anthoceros agrestis HOM05D006565 ORTHO05D008717 2.7e-99 366.3 291 63.9
FAN06G1903 Fragaria x ananassa HOM05D006565 ORTHO05D008717 3.9e-98 362.5 274 67.9
FAN01G3085 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.5e-97 359.8 282 65.6
SMO367G1082 Selaginella moellendorffii HOM05D006565 ORTHO05D008717 3.3e-97 359.4 289 61.2
Pp3c1_24570 Physcomitrium patens HOM05D006565 ORTHO05D008717 1.1e-95 354.4 287 61.7
FAN10G4168 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.7e-93 347.1 299 61.9
Prupe.2G074100 Prunus persica HOM05D006565 ORTHO05D008717 7.1e-92 341.7 221 75.6
AL4G35960 Arabidopsis lyrata HOM05D006565 ORTHO05D008717 1.3e-90 337.4 299 58.2
FAN21G0259 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.8e-90 337.0 276 62.3
Mapoly0082s0075 Marchantia polymorpha HOM05D006565 ORTHO05D008717 2.3e-90 336.7 268 61.2
FvH4_1g27810 Fragaria vesca HOM05D006565 ORTHO05D008717 8.2e-80 301.6 252 62.7
CBR_g36829 Chara braunii HOM05D006565 ORTHO05D001468 5.9e-78 295.4 392 43.4
PGSC0003DMG400001988 Solanum tuberosum HOM05D006565 ORTHO05D008717 1.9e-76 290.4 206 67.0
Nitab4.5_0016854g0010 Nicotiana tabacum HOM05D006565 ORTHO05D008717 1.1e-73 281.2 209 67.0
MBI05_g36782_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 3.3e-65 253.1 160 77.5
Haze_03436 Corylus avellana HOM05D006565 ORTHO05D008717 4.5e-62 242.7 270 51.9
Lj3A922G54 Lonicera japonica HOM05D006565 ORTHO05D008717 1.7e-56 224.2 170 67.6
Potri.008G015201 Populus trichocarpa HOM05D006565 ORTHO05D008717 6.5e-53 212.2 142 71.8
Sabra13G0091500 Salix brachista HOM05D006565 ORTHO05D008717 1.5e-52 211.1 160 69.4
PSO384G3661 Papaver somniferum HOM05D006565 ORTHO05D008717 5.5e-52 209.1 201 58.7
FAN10G3234 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.0e-49 200.7 252 46.8
Hma1.2p1_0098F.1_g048200 Hydrangea macrophylla HOM05D006565 ORTHO05D008717 1.0e-45 188.3 108 78.7
Glyma.10G195001 Glycine max HOM05D006565 ORTHO05D008717 4.5e-38 162.9 107 72.0
FAN10G0629 Fragaria x ananassa HOM05D006565 ORTHO05D008717 6.6e-37 159.1 182 51.1
FAN03G2487 Fragaria x ananassa HOM05D006565 ORTHO05D008717 3.3e-36 156.8 182 50.5
Lj3A922G55 Lonicera japonica HOM05D006565 ORTHO05D008717 6.8e-34 149.1 89 79.8
Cpa.g.sc33.129 Carica papaya HOM05D006565 ORTHO05D008717 2.9e-32 143.7 92 75.0
Cpa.g.sc33.128 Carica papaya HOM05D006565 ORTHO05D008717 8.3e-32 142.1 82 79.3
CSS0049814 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 2.7e-22 110.5 60 86.7
CSS0040424 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 1.0e-21 108.6 66 74.2
RhsimUnG0214900 Rhododendron simsii HOM05D006565 ORTHO05D008717 2.5e-20 104.0 81 64.2
Aqoxy6G01578 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 5.8e-17 92.8 144 43.8
MBI15_g31580_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 8.3e-16 89.0 60 73.3
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.4e-15 87.4 56 76.8
MBI05_g33289_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 1.8e-10 71.2 54 64.8
MBI17_g02193_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D011977 4.4e-09 66.6 44 75.0
Aqoxy6G01581 Aquilegia oxysepala HOM05D006565 ORTHO05D000596 2.9e-08 63.9 41 75.6
Psat7g239080 Pisum sativum HOM05D005767 ORTHO05D006785 7.8e-06 55.8 81 39.5


User provided reference genes

Program Settings