Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g14273 Nelumbo nucifera HOM05D007308 ORTHO05D009157 5.8e-203 710.7 361 100.0
TAR623G1715 Trochodendron aralioides HOM05D007308 ORTHO05D009157 1.2e-83 314.3 217 72.4
MBI17_g22148_MAGBIO Magnolia biondii HOM05D007308 ORTHO05D009157 2.9e-77 293.1 177 78.5
Aqoxy1G00692 Aquilegia oxysepala HOM05D007308 ORTHO05D009157 3.2e-76 289.7 176 76.7
CANSAT56G1109 Cannabis sativa HOM05D007308 ORTHO05D009157 1.0e-74 284.6 179 74.9
GSVIVG01034647001 Vitis vinifera HOM05D007308 ORTHO05D009157 1.3e-74 284.3 188 72.3
Dinv08592 Davidia involucrata HOM05D007308 ORTHO05D009157 3.9e-74 282.7 177 74.0
CDE02G0914 Ceratophyllum demersum HOM05D007308 ORTHO05D009157 5.1e-74 282.3 175 74.3
Rhsim09G0141500 Rhododendron simsii HOM05D007308 ORTHO05D009157 5.1e-74 282.3 187 70.1
Hma1.2p1_0457F.1_g156910 Hydrangea macrophylla HOM05D007308 ORTHO05D009157 3.3e-73 279.6 177 72.9
Glyma.20G194000 Glycine max HOM05D007308 ORTHO05D009157 4.3e-73 279.3 173 75.7
Prupe.2G071800 Prunus persica HOM05D007308 ORTHO05D009157 1.6e-72 277.3 176 73.3
MSTRG.27555 Avicennia marina HOM05D007308 ORTHO05D009157 8.1e-72 275.0 177 71.2
Medtr1g090630 Medicago truncatula HOM05D007308 ORTHO05D009157 1.1e-71 274.6 178 73.6
QL04p047115 Quercus lobata HOM05D007308 ORTHO05D009157 1.4e-71 274.2 179 71.5
Glyma.10G196200 Glycine max HOM05D007308 ORTHO05D009157 3.1e-71 273.1 173 74.0
CiPaw.13G043100 Carya illinoinensis HOM05D007308 ORTHO05D009157 5.3e-71 272.3 206 66.5
CSS0004692 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 2.0e-70 270.4 182 68.7
Potri.010G241700 Populus trichocarpa HOM05D007308 ORTHO05D009157 1.3e-69 267.7 181 69.6
PSO339G2601 Papaver somniferum HOM05D007308 ORTHO05D009157 1.7e-69 267.3 177 68.4
vmacro10315 Vaccinium macrocarpon HOM05D007308 ORTHO05D009157 2.2e-69 266.9 177 68.4
Lsat_1_v5_gn_3_53161 Lactuca sativa HOM05D007308 ORTHO05D009157 2.9e-69 266.5 179 67.0
Lalb_Chr02g0150981 Lupinus albus HOM05D007308 ORTHO05D009157 2.9e-69 266.5 179 71.5
Migut.F00856 Erythranthe guttata HOM05D007308 ORTHO05D009157 3.8e-69 266.2 177 70.6
PSO384G3587 Papaver somniferum HOM05D007308 ORTHO05D009157 8.4e-69 265.0 177 67.8
Thecc.10G116800 Theobroma cacao HOM05D007308 ORTHO05D009157 1.9e-68 263.8 193 67.4
TWI15G0952 Tripterygium wilfordii HOM05D007308 ORTHO05D009157 2.4e-68 263.5 198 62.6
Ciclev10016517m.g Citrus clementina HOM05D007308 ORTHO05D009157 3.2e-68 263.1 177 70.1
ClCG05G021890 Citrullus lanatus HOM05D007308 ORTHO05D009157 1.6e-67 260.8 178 66.3
CsaV3_5G035250 Cucumis sativus L. HOM05D007308 ORTHO05D009157 1.6e-67 260.8 178 68.5
arahy.Tifrunner.gnm1.ann1.I1QH9V Arachis hypogaea HOM05D007308 ORTHO05D009157 2.1e-67 260.4 173 68.2
arahy.Tifrunner.gnm1.ann1.ZU0NEU Arachis hypogaea HOM05D007308 ORTHO05D009157 2.1e-67 260.4 173 67.6
Lj5g0023307 Lotus japonicus HOM05D007308 ORTHO05D009157 4.6e-67 259.2 173 70.5
THA.LOC104816471 Tarenaya hassleriana HOM05D007308 ORTHO05D009157 6.0e-67 258.8 175 69.7
Sabra10G0189200 Salix brachista HOM05D000139 ORTHO05D000103 7.9e-67 258.5 175 69.7
ATR0772G202 Amborella trichopoda HOM05D007308 ORTHO05D009157 1.3e-66 257.7 179 68.7
Sabra08G0011300 Salix brachista HOM05D007308 ORTHO05D009157 1.3e-66 257.7 161 73.3
Cc02_g09470 Coffea canephora HOM05D007308 ORTHO05D009157 3.9e-66 256.1 179 67.0
SalBow3G3836 Salvia bowleyana HOM05D007308 ORTHO05D009157 3.9e-66 256.1 194 63.9
MD07G1062000 Malus domestica HOM05D007308 ORTHO05D009157 5.1e-66 255.8 183 67.2
Eucgr.J00279 Eucalyptus grandis HOM05D007308 ORTHO05D009157 6.7e-66 255.4 178 68.0
Gohir.D13G010000 Gossypium hirsutum HOM05D007308 ORTHO05D009157 6.7e-66 255.4 177 67.8
Duzib106G1839 Durio zibethinus HOM05D007308 ORTHO05D009157 1.9e-65 253.8 224 57.6
Gohir.A13G009300 Gossypium hirsutum HOM05D007308 ORTHO05D009157 2.5e-65 253.4 194 61.9
Lalb_Chr21g0312841 Lupinus albus HOM05D007308 ORTHO05D009157 4.3e-65 252.7 171 67.3
Gorai.013G010700 Gossypium raimondii HOM05D007308 ORTHO05D009157 5.6e-65 252.3 177 66.7
Sed0004755 Sechium edule HOM05D007308 ORTHO05D009157 5.6e-65 252.3 169 68.6
Haze_03470 Corylus avellana HOM05D007308 ORTHO05D009157 7.4e-65 251.9 202 61.9
HanXRQChr05g0147281 Helianthus annuus HOM05D007308 ORTHO05D009157 7.4e-65 251.9 206 59.2
Hund06794 Selenicereus undatus HOM05D007308 ORTHO05D009157 7.4e-65 251.9 226 58.0
BcaB01g05916 Brassica carinata HOM05D007308 ORTHO05D009157 9.6e-65 251.5 179 67.6
C03p02230 Brassica napus HOM05D007308 ORTHO05D009157 9.6e-65 251.5 179 67.6
BolC3t12774H Brassica oleracea HOM05D007308 ORTHO05D009157 9.6e-65 251.5 179 67.6
PGR044G1814 Punica granatum HOM05D007308 ORTHO05D009157 9.6e-65 251.5 217 59.9
AT5G04830 Arabidopsis thaliana HOM05D007308 ORTHO05D009157 1.3e-64 251.1 175 67.4
AL6G14490 Arabidopsis lyrata HOM05D007308 ORTHO05D009157 3.7e-64 249.6 175 66.9
HPP92_005473 Vanilla planifolia HOM05D007308 ORTHO05D009157 3.7e-64 249.6 173 67.6
ECA232G3668 Erigeron canadensis HOM05D007308 ORTHO05D009157 6.2e-64 248.8 175 65.1
Phvul.007G138800 Phaseolus vulgaris HOM05D007308 ORTHO05D009157 8.1e-64 248.4 172 69.8
Lj3C924T9 Lonicera japonica HOM05D007308 ORTHO05D009157 1.8e-63 247.3 208 60.1
Sp6g38000 Schrenkiella parvula HOM05D007308 ORTHO05D009157 1.8e-63 247.3 157 73.2
Sc20g0001110 Simmondsia chinensis HOM05D007308 ORTHO05D009157 2.4e-63 246.9 178 67.4
A10p31380 Brassica napus HOM05D007308 ORTHO05D009157 3.1e-63 246.5 158 72.8
BcaC06g32190 Brassica carinata HOM05D007308 ORTHO05D009157 4.0e-63 246.1 177 68.4
Peaxi162Scf00725g00524 Petunia axillaris HOM05D007308 ORTHO05D009157 5.3e-63 245.7 181 65.2
Sed0002245 Sechium edule HOM05D007308 ORTHO05D009157 5.3e-63 245.7 181 63.5
Carub.0006s0371 Capsella rubella HOM05D007308 ORTHO05D009157 1.2e-62 244.6 174 66.7
Nitab4.5_0001047g0020 Nicotiana tabacum HOM05D007308 ORTHO05D009157 1.2e-62 244.6 179 67.6
A03p01870 Brassica napus HOM05D007308 ORTHO05D009157 1.5e-62 244.2 179 65.4
BraA03t09557Z Brassica rapa HOM05D007308 ORTHO05D009157 1.5e-62 244.2 179 65.4
C09p72050 Brassica napus HOM05D007308 ORTHO05D009157 2.0e-62 243.8 177 67.8
Aa31LG11G5650 Aethionema arabicum HOM05D007308 ORTHO05D009157 3.4e-62 243.0 157 70.1
VMungo0720G2616 Vigna mungo HOM05D007308 ORTHO05D009157 1.3e-61 241.1 208 56.2
CARHR208450 Cardamine hirsuta HOM05D007308 ORTHO05D009157 2.2e-61 240.4 179 63.7
SGA_v2.0_scaffold272G46352 Striga asiatica HOM05D007308 ORTHO05D009157 2.9e-61 240.0 242 52.5
Thhalv10014751m.g Eutrema salsugineum HOM05D007308 ORTHO05D009157 3.8e-61 239.6 157 70.7
BraA10t45184Z Brassica rapa HOM05D007308 ORTHO05D009157 4.9e-61 239.2 166 69.3
PGR044G1810 Punica granatum HOM05D007308 ORTHO05D009157 4.9e-61 239.2 181 62.4
BolC9t59950H Brassica oleracea HOM05D007308 ORTHO05D009157 6.5e-61 238.8 185 65.4
Os01g0965900 Oryza sativa ssp. japonica HOM05D007308 ORTHO05D009157 6.5e-61 238.8 160 68.8
PGSC0003DMG400001980 Solanum tuberosum HOM05D007308 ORTHO05D009157 3.2e-60 236.5 177 65.5
Zm00001eb362380 Zea mays HOM05D007308 ORTHO05D009157 4.2e-60 236.1 156 67.9
unitig_32.g11899 Utricularia gibba HOM05D007308 ORTHO05D009157 4.6e-59 232.6 177 62.1
CSS0017788 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 2.5e-57 226.9 182 61.0
Mapoly0021s0141 Marchantia polymorpha HOM05D007308 ORTHO05D009157 4.1e-55 219.5 191 56.5
Pp3c14_20980 Physcomitrium patens HOM05D007308 ORTHO05D009157 1.1e-52 211.5 161 60.9
AagrBONN_evm.TU.Sc2ySwM_344.2550 Anthoceros agrestis HOM05D007308 ORTHO05D009157 2.7e-51 206.8 166 57.8
MELO3C012339.2 Cucumis melo HOM05D007308 ORTHO05D009157 1.8e-50 204.1 141 66.7
Pp3c19_15880 Physcomitrium patens HOM05D007308 ORTHO05D009157 5.1e-50 202.6 159 59.1
CiPaw.14G034600 Carya illinoinensis HOM05D007308 ORTHO05D009157 1.1e-49 201.4 234 50.4
SMO143G0271 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 1.1e-49 201.4 158 61.4
SEGI_14438 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 2.5e-49 200.3 170 58.2
Sopen11g002410 Solanum pennellii HOM05D007308 ORTHO05D009157 3.3e-49 199.9 137 67.9
Solyc11g006505.1 Solanum lycopersicum HOM05D007308 ORTHO05D009157 5.7e-49 199.1 186 54.3
Actinidia34730 Actinidia chinensis HOM05D000139 ORTHO05D000103 1.4e-47 194.5 131 69.5
SEGI_29808 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 6.5e-45 185.7 155 60.0
SMO265G0003 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 5.5e-44 182.6 153 59.5
RcHm_v2.0_Chr1g0331851 Rosa chinensis HOM05D007308 ORTHO05D009157 7.2e-44 182.2 133 66.2
Manes.10G060700 Manihot esculenta HOM05D007308 ORTHO05D009157 1.0e-42 178.3 120 65.8
Pp3c1_28520 Physcomitrium patens HOM05D007308 ORTHO05D009157 6.9e-39 165.6 119 63.9
BcaNung05151 Brassica carinata HOM05D007308 ORTHO05D009157 2.2e-32 144.1 193 46.6
Atru.BG.262.p Acer truncatum HOM05D007308 ORTHO05D009157 9.1e-31 138.7 80 78.8
Nn7g36745 Nelumbo nucifera HOM05D007308 ORTHO05D009157 1.1e-28 131.7 102 72.5
Potri.008G017701 Populus trichocarpa HOM05D007308 ORTHO05D009157 1.9e-28 131.0 81 70.4
Pp3c2_31450 Physcomitrium patens HOM05D007308 ORTHO05D009157 1.7e-24 117.9 124 50.8
CBR_g30213 Chara braunii HOM05D007308 ORTHO05D009157 8.0e-19 99.0 146 39.7
Actinidia27055 Actinidia chinensis HOM05D007308 ORTHO05D009157 1.1e-12 78.6 90 51.1
PGSC0003DMG400007605 Solanum tuberosum HOM05D000011 ORTHO05D000018 2.5e-12 77.4 47 70.2
Sopen11g002430 Solanum pennellii HOM05D000011 ORTHO05D000018 4.0e-10 70.1 57 56.1
PGSC0003DMG402001979 Solanum tuberosum HOM05D000011 ORTHO05D000018 2.6e-09 67.4 41 68.3
Sopen11g002570 Solanum pennellii HOM05D000011 ORTHO05D000018 4.5e-06 56.6 34 70.6


User provided reference genes

Program Settings