Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g14263 Nelumbo nucifera HOM05D006311 ORTHO05D007732 2.9e-103 378.6 200 100.0
TAR623G0571 Trochodendron aralioides HOM05D006311 ORTHO05D007732 1.4e-65 253.4 201 72.6
CSS0008256 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 6.1e-61 238.0 208 68.3
CSS0012591 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 6.1e-61 238.0 208 68.3
PSO384G4643 Papaver somniferum HOM05D006311 ORTHO05D007732 3.0e-60 235.7 200 68.5
MBI17_g18935_MAGBIO Magnolia biondii HOM05D006311 ORTHO05D007732 4.4e-59 231.9 159 80.5
Dinv05953 Davidia involucrata HOM05D006311 ORTHO05D007732 5.7e-59 231.5 186 69.9
Glyma.12G093300 Glycine max HOM05D006311 ORTHO05D007732 7.5e-59 231.1 201 65.7
PSO339G0926 Papaver somniferum HOM05D006311 ORTHO05D007732 7.5e-59 231.1 200 67.5
Cc01_g08620 Coffea canephora HOM05D006311 ORTHO05D007732 1.7e-58 229.9 201 66.7
TWI31G0202 Tripterygium wilfordii HOM05D006311 ORTHO05D007732 1.7e-58 229.9 171 76.6
MD11G1172600 Malus domestica HOM05D006311 ORTHO05D007732 2.8e-58 229.2 200 65.0
Cpa.g.sc195.39 Carica papaya HOM05D006311 ORTHO05D007732 6.3e-58 228.0 200 68.0
AUR62001536 Chenopodium quinoa HOM05D006311 ORTHO05D007732 6.3e-58 228.0 172 73.3
Sc21g0006890 Simmondsia chinensis HOM05D006311 ORTHO05D007732 8.2e-58 227.6 158 76.6
Cfa009969 Carpinus fangiana HOM05D006311 ORTHO05D007732 1.4e-57 226.9 152 81.6
FvH4_3g25980 Fragaria vesca HOM05D006311 ORTHO05D007732 1.4e-57 226.9 206 68.0
FAN11G0814 Fragaria x ananassa HOM05D006311 ORTHO05D007732 1.4e-57 226.9 206 68.0
RcHm_v2.0_Chr5g0047271 Rosa chinensis HOM05D006311 ORTHO05D007732 1.4e-57 226.9 209 66.5
CiPaw.13G131700 Carya illinoinensis HOM05D006311 ORTHO05D007732 1.8e-57 226.5 193 68.4
Lj3g0006801 Lotus japonicus HOM05D006311 ORTHO05D007732 1.8e-57 226.5 203 65.0
Manes.11G165200 Manihot esculenta HOM05D006311 ORTHO05D007732 1.8e-57 226.5 155 78.7
Nitab4.5_0000893g0010 Nicotiana tabacum HOM05D006311 ORTHO05D007732 4.1e-57 225.3 157 79.0
arahy.Tifrunner.gnm1.ann1.INBK63 Arachis hypogaea HOM05D006311 ORTHO05D007732 5.3e-57 224.9 200 66.5
HanXRQChr14g0433141 Helianthus annuus HOM05D006311 ORTHO05D007732 5.3e-57 224.9 161 76.4
TPR.G4615 Trifolium pratense HOM05D006311 ORTHO05D007732 5.3e-57 224.9 201 65.7
Atru.chr3.3143 Acer truncatum HOM05D006311 ORTHO05D007732 9.1e-57 224.2 187 69.0
FAN25G1023 Fragaria x ananassa HOM05D006311 ORTHO05D007732 9.1e-57 224.2 206 67.0
Rhsim01G0202100 Rhododendron simsii HOM05D006311 ORTHO05D007732 9.1e-57 224.2 151 80.1
Aqoxy4G02682 Aquilegia oxysepala HOM05D006311 ORTHO05D007732 1.2e-56 223.8 202 66.3
arahy.Tifrunner.gnm1.ann1.HB0RZJ Arachis hypogaea HOM05D006311 ORTHO05D007732 1.2e-56 223.8 200 66.0
ClCG02G022370 Citrullus lanatus HOM05D006311 ORTHO05D007732 1.6e-56 223.4 152 78.9
CANSAT54G0913 Cannabis sativa HOM05D006311 ORTHO05D007732 2.0e-56 223.0 210 65.2
Nitab4.5_0001135g0160 Nicotiana tabacum HOM05D006311 ORTHO05D007732 2.7e-56 222.6 159 76.7
Sed0028181 Sechium edule HOM05D006311 ORTHO05D007732 2.7e-56 222.6 187 69.5
CAN.G745.31 Capsicum annuum HOM05D006311 ORTHO05D007732 3.5e-56 222.2 185 70.8
Glyma.11G180200 Glycine max HOM05D006311 ORTHO05D007732 3.5e-56 222.2 202 63.9
FAN16G2986 Fragaria x ananassa HOM05D006311 ORTHO05D007732 4.5e-56 221.9 204 66.2
Gohir.A09G097700 Gossypium hirsutum HOM05D006311 ORTHO05D007732 4.5e-56 221.9 186 67.7
Gorai.006G114200 Gossypium raimondii HOM05D006311 ORTHO05D007732 4.5e-56 221.9 186 67.7
AUR62020246 Chenopodium quinoa HOM05D006311 ORTHO05D007732 5.9e-56 221.5 171 70.2
FAN21G2836 Fragaria x ananassa HOM05D006311 ORTHO05D007732 5.9e-56 221.5 206 66.5
Actinidia07269 Actinidia chinensis HOM05D006311 ORTHO05D007732 7.7e-56 221.1 208 65.4
Gohir.D09G097500 Gossypium hirsutum HOM05D006311 ORTHO05D007732 1.0e-55 220.7 186 67.7
Oeu048845.1 Olea europaea HOM05D006311 ORTHO05D007732 1.0e-55 220.7 152 77.0
VMungo1127G2206 Vigna mungo HOM05D006311 ORTHO05D007732 1.3e-55 220.3 205 64.9
Medtr4g052010 Medicago truncatula HOM05D006311 ORTHO05D007732 1.7e-55 219.9 202 65.8
GSVIVG01036060001 Vitis vinifera HOM05D006311 ORTHO05D007732 1.7e-55 219.9 194 69.6
CsaV3_6G038500 Cucumis sativus L. HOM05D006311 ORTHO05D007732 2.2e-55 219.5 155 78.1
DCAR_010317 Daucus carota HOM05D006311 ORTHO05D007732 2.2e-55 219.5 201 63.2
Eucgr.J00538 Eucalyptus grandis HOM05D006311 ORTHO05D007732 2.2e-55 219.5 152 78.9
Lalb_Chr01g0004961 Lupinus albus HOM05D006311 ORTHO05D007732 2.2e-55 219.5 186 67.7
PGR119G0707 Punica granatum HOM05D006311 ORTHO05D007732 2.2e-55 219.5 155 76.1
COL.COLO4_22654 Corchorus olitorius HOM05D006311 ORTHO05D007732 3.8e-55 218.8 193 65.8
MELO3C014513.2 Cucumis melo HOM05D006311 ORTHO05D007732 3.8e-55 218.8 155 78.1
Duzib150G1639 Durio zibethinus HOM05D006311 ORTHO05D007732 3.8e-55 218.8 145 80.0
Ciclev10029330m.g Citrus clementina HOM05D006311 ORTHO05D007732 5.0e-55 218.4 203 65.0
Sopen11g027510 Solanum pennellii HOM05D006311 ORTHO05D007732 8.5e-55 217.6 201 64.7
PGSC0003DMG400019619 Solanum tuberosum HOM05D006311 ORTHO05D007732 1.1e-54 217.2 201 65.2
Ca_19458_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 1.9e-54 216.5 156 75.6
Phvul.011G097600 Phaseolus vulgaris HOM05D006311 ORTHO05D007732 2.5e-54 216.1 202 63.9
HPP92_023073 Vanilla planifolia HOM05D006311 ORTHO05D007732 2.5e-54 216.1 149 80.5
MSTRG.21022 Avicennia marina HOM05D006311 ORTHO05D007732 3.2e-54 215.7 196 65.8
Lalb_Chr03g0028331 Lupinus albus HOM05D006311 ORTHO05D007732 3.2e-54 215.7 160 73.8
BcaB06g28139 Brassica carinata HOM05D006311 ORTHO05D007732 5.5e-54 214.9 152 76.3
SalBow6G1677 Salvia bowleyana HOM05D006311 ORTHO05D007732 5.5e-54 214.9 183 69.4
Migut.D02415 Erythranthe guttata HOM05D006311 ORTHO05D007732 7.2e-54 214.5 200 65.5
Solyc11g068790.2 Solanum lycopersicum HOM05D006311 ORTHO05D007732 7.2e-54 214.5 201 64.7
Ca_29924_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 9.4e-54 214.2 192 67.2
Psat7g187040 Pisum sativum HOM05D006311 ORTHO05D007732 9.4e-54 214.2 201 63.2
QL01p011364 Quercus lobata HOM05D006311 ORTHO05D007732 9.4e-54 214.2 152 77.6
Peaxi162Scf00224g00818 Petunia axillaris HOM05D006311 ORTHO05D007732 1.2e-53 213.8 193 66.3
THA.LOC104826442 Tarenaya hassleriana HOM05D006311 ORTHO05D007732 1.2e-53 213.8 207 64.3
Lsat_1_v5_gn_2_35940 Lactuca sativa HOM05D006311 ORTHO05D007732 1.6e-53 213.4 152 75.0
ECA238G1364 Erigeron canadensis HOM05D006311 ORTHO05D007732 2.1e-53 213.0 132 83.3
Sabra09G0126500 Salix brachista HOM05D006311 ORTHO05D007732 2.1e-53 213.0 187 66.3
Thecc.09G276000 Theobroma cacao HOM05D006311 ORTHO05D007732 2.1e-53 213.0 192 65.1
BcaB06g28142 Brassica carinata HOM05D006311 ORTHO05D007732 3.6e-53 212.2 201 61.7
A04p20870 Brassica napus HOM05D006311 ORTHO05D007732 3.6e-53 212.2 202 61.4
vmacro14327 Vaccinium macrocarpon HOM05D006311 ORTHO05D007732 3.6e-53 212.2 208 63.9
unitig_0.g1470 Utricularia gibba HOM05D006311 ORTHO05D007732 4.7e-53 211.8 162 72.2
QL01p011627 Quercus lobata HOM05D006311 ORTHO05D007732 8.0e-53 211.1 156 75.0
Potri.009G161800 Populus trichocarpa HOM05D006311 ORTHO05D007732 1.4e-52 210.3 161 73.3
C04p56680 Brassica napus HOM05D006311 ORTHO05D007732 2.3e-52 209.5 192 63.0
BolC4t27200H Brassica oleracea HOM05D006311 ORTHO05D007732 2.3e-52 209.5 192 63.0
CARHR119830 Cardamine hirsuta HOM05D006311 ORTHO05D007732 4.0e-52 208.8 206 61.2
BcaB01g03062 Brassica carinata HOM05D006311 ORTHO05D007732 6.8e-52 208.0 152 72.4
BcaB01g03063 Brassica carinata HOM05D006311 ORTHO05D007732 6.8e-52 208.0 152 72.4
Sp4g10100 Schrenkiella parvula HOM05D006311 ORTHO05D007732 6.8e-52 208.0 174 67.8
BolC4t27194H Brassica oleracea HOM05D006311 ORTHO05D007732 1.2e-51 207.2 185 63.8
AL4G21210 Arabidopsis lyrata HOM05D006311 ORTHO05D007732 1.5e-51 206.8 161 72.0
SGA_v2.0_scaffold7G03983 Striga asiatica HOM05D006311 ORTHO05D007732 1.5e-51 206.8 196 65.8
BraA04t17659Z Brassica rapa HOM05D001305 ORTHO05D007732 4.4e-51 205.3 180 64.4
Hund20941 Selenicereus undatus HOM05D006311 ORTHO05D007732 5.7e-51 204.9 133 81.2
Aa31LG5G8700 Aethionema arabicum HOM05D006311 ORTHO05D007732 7.5e-51 204.5 175 68.0
MSTRG.18783 Avicennia marina HOM05D006311 ORTHO05D007732 7.5e-51 204.5 181 65.2
AT2G27290 Arabidopsis thaliana HOM05D006311 ORTHO05D007732 1.3e-50 203.8 183 65.6
Carub.0004s0790 Capsella rubella HOM05D006311 ORTHO05D007732 1.3e-50 203.8 199 62.3
EL10Ac7g16320 Beta vulgaris HOM05D006311 ORTHO05D007732 6.3e-50 201.4 191 61.8
Thhalv10002100m.g Eutrema salsugineum HOM05D006311 ORTHO05D007732 6.3e-50 201.4 132 78.8
ATR0772G022 Amborella trichopoda HOM05D006311 ORTHO05D007732 1.2e-48 197.2 200 59.5
Os04g0416000 Oryza sativa ssp. japonica HOM05D006311 ORTHO05D007732 2.7e-48 196.1 158 69.0
SEGI_25108 Sequoiadendron giganteum HOM05D006311 ORTHO05D007732 7.7e-48 194.5 145 69.0
CDE02G3359 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 1.0e-47 194.1 120 82.5
CBR_g30935 Chara braunii HOM05D006311 ORTHO05D007732 3.8e-47 192.2 162 63.6
Prupe.6G139600 Prunus persica HOM05D006311 ORTHO05D007732 4.2e-46 188.7 202 58.4
Mapoly0006s0182 Marchantia polymorpha HOM05D006311 ORTHO05D007732 9.5e-46 187.6 196 58.2
Lj1A261G25 Lonicera japonica HOM05D006311 ORTHO05D007732 1.8e-44 183.3 119 84.9
SMO146G0331 Selaginella moellendorffii HOM05D006311 ORTHO05D007732 1.8e-44 183.3 129 75.2
Pp3c14_19090 Physcomitrium patens HOM05D006311 ORTHO05D007732 6.8e-44 181.4 192 56.8
Haze_23330 Corylus avellana HOM05D006311 ORTHO05D007732 2.0e-43 179.9 120 81.7
SGA_v2.0_scaffold114G31957 Striga asiatica HOM05D006311 ORTHO05D007732 9.8e-43 177.6 117 80.3
MD03G1152600 Malus domestica HOM05D006311 ORTHO05D007732 1.2e-40 170.6 108 81.5
AagrBONN_evm.TU.Sc2ySwM_117.22 Anthoceros agrestis HOM05D006311 ORTHO05D007732 5.0e-39 165.2 220 46.8
MCO12G429 Micromonas commoda HOM05D006311 ORTHO05D007732 7.3e-38 161.4 130 61.5
Cre12.g485850 Chlamydomonas reinhardtii HOM05D006311 ORTHO05D007732 3.4e-35 152.5 142 56.3
PRCOL_00001321 Prasinoderma coloniale HOM05D006311 ORTHO05D007732 4.6e-32 142.1 133 60.2
Gohir.D07G115550 Gossypium hirsutum HOM05D006311 ORTHO05D007732 1.1e-30 137.5 86 86.0
Gohir.A07G112050 Gossypium hirsutum HOM05D006311 ORTHO05D007732 2.5e-30 136.3 86 86.0
BcaC02g08251 Brassica carinata HOM05D006311 ORTHO05D007732 3.3e-30 136.0 160 53.8
Gorai.001G123800 Gossypium raimondii HOM05D006311 ORTHO05D007732 4.3e-30 135.6 86 84.9
BcaC02g08253 Brassica carinata HOM05D006311 ORTHO05D007732 1.6e-29 133.7 150 53.3
Actinidia24237 Actinidia chinensis HOM05D006311 ORTHO05D007732 2.9e-26 122.9 139 57.6
Oeu009055.1 Olea europaea HOM05D000182 ORTHO05D000112 1.2e-24 117.5 92 69.6
BraA04t17657Z Brassica rapa HOM05D006311 ORTHO05D007732 2.7e-24 116.3 86 72.1
A04p20840 Brassica napus HOM05D006311 ORTHO05D007732 3.6e-21 105.9 78 73.1
Zm00001eb422070 Zea mays HOM05D006311 ORTHO05D007732 1.8e-20 103.6 124 54.0
CDE08G1250 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 9.2e-17 91.3 197 35.5
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 1.0e-07 61.2 105 34.3
VMungo1383G0342 Vigna mungo HOM05D006047 ORTHO05D007353 4.3e-06 55.8 116 32.8


User provided reference genes

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