Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g14238 Nelumbo nucifera HOM05D005659 ORTHO05D007059 3.2e-75 285.0 145 100.0
Hma1.2p1_2164F.1_g315750 Hydrangea macrophylla HOM05D005659 ORTHO05D007059 8.4e-44 180.6 121 72.7
TAR633G2174 Trochodendron aralioides HOM05D005659 ORTHO05D007059 1.9e-43 179.5 119 73.9
Cc01_g08780 Coffea canephora HOM05D005659 ORTHO05D007059 1.2e-42 176.8 133 68.4
CSS0022105 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 1.6e-42 176.4 121 72.7
Cfa009983 Carpinus fangiana HOM05D005659 ORTHO05D007059 2.1e-42 176.0 121 75.2
CAN.G919.41 Capsicum annuum HOM05D005659 ORTHO05D007059 2.3e-41 172.6 117 73.5
PGSC0003DMG400005890 Solanum tuberosum HOM05D005659 ORTHO05D007059 3.0e-41 172.2 117 72.6
Haze_23342 Corylus avellana HOM05D005659 ORTHO05D007059 5.1e-41 171.4 121 72.7
MBI17_g28186_MAGBIO Magnolia biondii HOM05D005659 ORTHO05D007059 8.7e-41 170.6 112 72.3
SalBow6G0820 Salvia bowleyana HOM05D005659 ORTHO05D007059 8.7e-41 170.6 122 71.3
GSVIVG01036077001 Vitis vinifera HOM05D005659 ORTHO05D007059 1.9e-40 169.5 119 68.9
Oeu002356.1 Olea europaea HOM05D005659 ORTHO05D007059 2.5e-40 169.1 121 70.2
Solyc06g074200.4 Solanum lycopersicum HOM05D005659 ORTHO05D007059 2.5e-40 169.1 117 70.9
Sopen06g030620 Solanum pennellii HOM05D005659 ORTHO05D007059 2.5e-40 169.1 117 70.9
Peaxi162Scf00091g00713 Petunia axillaris HOM05D005659 ORTHO05D007059 5.6e-40 167.9 117 70.1
CANSAT54G0546 Cannabis sativa HOM05D005659 ORTHO05D007059 7.3e-40 167.5 120 70.8
QL01p011787 Quercus lobata HOM05D005659 ORTHO05D007059 9.6e-40 167.2 119 70.6
CDE02G1582 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 1.3e-39 166.8 119 66.4
Nitab4.5_0006903g0010 Nicotiana tabacum HOM05D005659 ORTHO05D007059 1.3e-39 166.8 120 70.8
DCAR_012226 Daucus carota HOM05D005659 ORTHO05D007059 1.6e-39 166.4 119 68.9
Potri.009G160800 Populus trichocarpa HOM05D005659 ORTHO05D007059 3.6e-39 165.2 121 69.4
Cpa.g.sc195.32 Carica papaya HOM05D005659 ORTHO05D007059 6.2e-39 164.5 121 70.2
MSTRG.18774 Avicennia marina HOM05D005659 ORTHO05D007059 8.1e-39 164.1 117 70.1
CDE08G1285 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 1.1e-38 163.7 119 65.5
Ciclev10029515m.g Citrus clementina HOM05D005659 ORTHO05D007059 1.1e-38 163.7 122 69.7
MD11G1169900 Malus domestica HOM05D005659 ORTHO05D007059 1.1e-38 163.7 120 71.7
Sabra04G0134500 Salix brachista HOM05D005659 ORTHO05D007059 1.1e-38 163.7 121 68.6
Eucgr.B03824 Eucalyptus grandis HOM05D005659 ORTHO05D007059 1.8e-38 162.9 120 70.0
Manes.04G000900 Manihot esculenta HOM05D005659 ORTHO05D007059 1.8e-38 162.9 123 67.5
PSO339G3866 Papaver somniferum HOM05D005659 ORTHO05D007059 2.4e-38 162.5 121 68.6
PSO384G5049 Papaver somniferum HOM05D005659 ORTHO05D007059 3.1e-38 162.2 121 68.6
CiPaw.14G097600 Carya illinoinensis HOM05D005659 ORTHO05D007059 6.9e-38 161.0 122 69.7
Sc12g0004680 Simmondsia chinensis HOM05D005659 ORTHO05D007059 6.9e-38 161.0 119 68.1
CSS0045008 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 1.2e-37 160.2 120 67.5
MD03G1150500 Malus domestica HOM05D005659 ORTHO05D007059 1.2e-37 160.2 120 69.2
Potri.004G199400 Populus trichocarpa HOM05D005659 ORTHO05D007059 1.2e-37 160.2 121 68.6
Sed0025059 Sechium edule HOM05D005659 ORTHO05D007059 2.6e-37 159.1 120 68.3
CsaV3_1G015100 Cucumis sativus L. HOM05D005659 ORTHO05D007059 5.8e-37 157.9 116 67.2
Lj3g0027363 Lotus japonicus HOM05D005659 ORTHO05D007059 5.8e-37 157.9 119 66.4
Prupe.6G137400 Prunus persica HOM05D005659 ORTHO05D007059 5.8e-37 157.9 121 70.2
Atru.chr3.3161 Acer truncatum HOM05D005659 ORTHO05D007059 9.9e-37 157.1 120 66.7
PGR102G0055 Punica granatum HOM05D005659 ORTHO05D007059 9.9e-37 157.1 120 67.5
Sabra09G0125800 Salix brachista HOM05D005659 ORTHO05D007059 9.9e-37 157.1 121 66.1
TWI75G1160 Tripterygium wilfordii HOM05D005659 ORTHO05D007059 1.3e-36 156.8 121 66.1
Dinv22811 Davidia involucrata HOM05D005659 ORTHO05D007059 4.9e-36 154.8 91 72.5
Gohir.D05G082100 Gossypium hirsutum HOM05D005659 ORTHO05D007059 4.9e-36 154.8 120 66.7
HanXRQChr04g0128561 Helianthus annuus HOM05D005659 ORTHO05D007059 6.4e-36 154.5 117 63.2
ATR0579G079 Amborella trichopoda HOM05D005659 ORTHO05D007059 8.4e-36 154.1 110 69.1
A09p65930 Brassica napus HOM05D005659 ORTHO05D007059 8.4e-36 154.1 120 65.0
BraA09t41937Z Brassica rapa HOM05D005659 ORTHO05D007059 8.4e-36 154.1 120 65.0
Gorai.009G083700 Gossypium raimondii HOM05D005659 ORTHO05D007059 8.4e-36 154.1 120 66.7
RcHm_v2.0_Chr5g0046981 Rosa chinensis HOM05D005659 ORTHO05D007059 1.4e-35 153.3 122 67.2
BcaC07g42532 Brassica carinata HOM05D005659 ORTHO05D007059 2.4e-35 152.5 120 65.0
BolC8t52533H Brassica oleracea HOM05D005659 ORTHO05D007059 2.4e-35 152.5 120 64.2
Gohir.A05G079200 Gossypium hirsutum HOM05D005659 ORTHO05D007059 5.4e-35 151.4 119 63.9
VMungo1127G0741 Vigna mungo HOM05D005659 ORTHO05D007059 7.1e-35 151.0 119 63.0
MELO3C025587.2 Cucumis melo HOM05D005659 ORTHO05D007059 1.2e-34 150.2 143 55.9
Sp1g07030 Schrenkiella parvula HOM05D005659 ORTHO05D007059 1.2e-34 150.2 120 63.3
SGA_v2.0_scaffold7G03995 Striga asiatica HOM05D005659 ORTHO05D007059 1.2e-34 150.2 120 65.8
ATR0772G031 Amborella trichopoda HOM05D005659 ORTHO05D007059 1.6e-34 149.8 110 66.4
Aa31sc785G10 Aethionema arabicum HOM05D005659 ORTHO05D007059 2.1e-34 149.4 119 62.2
BcaC07g41946 Brassica carinata HOM05D005659 ORTHO05D007059 2.1e-34 149.4 120 63.3
C08p50030 Brassica napus HOM05D005659 ORTHO05D007059 2.1e-34 149.4 120 63.3
Thecc.09G277800 Theobroma cacao HOM05D005659 ORTHO05D007059 2.1e-34 149.4 120 65.8
BcaB07g34086 Brassica carinata HOM05D005659 ORTHO05D007059 2.7e-34 149.1 120 63.3
A06p05400 Brassica napus HOM05D005659 ORTHO05D007059 2.7e-34 149.1 114 63.2
C05p06520 Brassica napus HOM05D005659 ORTHO05D007059 2.7e-34 149.1 120 63.3
BolC5t29412H Brassica oleracea HOM05D005659 ORTHO05D007059 2.7e-34 149.1 120 63.3
BraA06t23749Z Brassica rapa HOM05D005659 ORTHO05D007059 2.7e-34 149.1 114 63.2
AUR62001528 Chenopodium quinoa HOM05D005659 ORTHO05D007059 4.6e-34 148.3 122 63.9
ECA236G2734 Erigeron canadensis HOM05D005659 ORTHO05D007059 4.6e-34 148.3 118 62.7
Glyma.12G092000 Glycine max HOM05D005659 ORTHO05D007059 6.0e-34 147.9 118 63.6
CARHR008270 Cardamine hirsuta HOM05D005659 ORTHO05D007059 7.9e-34 147.5 120 61.7
Gohir.D07G115000 Gossypium hirsutum HOM05D005659 ORTHO05D007059 7.9e-34 147.5 119 63.9
Gorai.001G123200 Gossypium raimondii HOM05D005659 ORTHO05D007059 7.9e-34 147.5 119 63.9
Phvul.011G096400 Phaseolus vulgaris HOM05D005659 ORTHO05D007059 1.0e-33 147.1 119 61.3
Glyma.11G181100 Glycine max HOM05D005659 ORTHO05D007059 1.8e-33 146.4 118 62.7
TAR623G1200 Trochodendron aralioides HOM05D005659 ORTHO05D007059 2.3e-33 146.0 90 80.0
Carub.0001s0773 Capsella rubella HOM05D005659 ORTHO05D007059 3.9e-33 145.2 120 62.5
Lalb_Chr03g0028281 Lupinus albus HOM05D005659 ORTHO05D007059 3.9e-33 145.2 119 62.2
Actinidia37070 Actinidia chinensis HOM05D005659 ORTHO05D007059 6.7e-33 144.4 118 63.6
Aqoxy4G02709 Aquilegia oxysepala HOM05D005659 ORTHO05D007059 6.7e-33 144.4 122 62.3
EL10Ac4g08175 Beta vulgaris HOM05D005659 ORTHO05D007059 6.7e-33 144.4 121 63.6
BcaB03g13338 Brassica carinata HOM05D005659 ORTHO05D007059 6.7e-33 144.4 119 62.2
THA.LOC104826438 Tarenaya hassleriana HOM05D005659 ORTHO05D007059 6.7e-33 144.4 122 62.3
AT1G08380 Arabidopsis thaliana HOM05D005659 ORTHO05D007059 8.7e-33 144.1 120 61.7
Psat7g186640 Pisum sativum HOM05D005659 ORTHO05D007059 8.7e-33 144.1 120 63.3
Migut.D02409 Erythranthe guttata HOM05D005659 ORTHO05D007059 1.9e-32 142.9 85 74.1
A08p35240 Brassica napus HOM05D005659 ORTHO05D007059 2.5e-32 142.5 108 64.8
FAN21G2850 Fragaria x ananassa HOM05D005659 ORTHO05D007059 2.5e-32 142.5 121 62.8
Ca_26075_v3 Cicer arietinum L. HOM05D005659 ORTHO05D007059 3.3e-32 142.1 120 61.7
FAN25G1572 Fragaria x ananassa HOM05D005659 ORTHO05D007059 3.3e-32 142.1 121 62.8
FAN16G1033 Fragaria x ananassa HOM05D005659 ORTHO05D007059 7.4e-32 141.0 121 62.0
unitig_0.g1472 Utricularia gibba HOM05D005659 ORTHO05D007059 1.3e-31 140.2 117 60.7
FAN11G1786 Fragaria x ananassa HOM05D005659 ORTHO05D007059 1.6e-31 139.8 121 62.0
Hund18778 Selenicereus undatus HOM05D005659 ORTHO05D007059 1.6e-31 139.8 124 63.7
arahy.Tifrunner.gnm1.ann1.MVQ7LV Arachis hypogaea HOM05D005659 ORTHO05D007059 2.1e-31 139.4 119 62.2
AL1G18790 Arabidopsis lyrata HOM05D005659 ORTHO05D007059 2.8e-31 139.0 85 69.4
arahy.Tifrunner.gnm1.ann1.QDSR7W Arachis hypogaea HOM05D005659 ORTHO05D007059 2.8e-31 139.0 119 62.2
Medtr4g052420 Medicago truncatula HOM05D005659 ORTHO05D007059 3.7e-31 138.7 108 63.9
FvH4_3g25770 Fragaria vesca HOM05D005659 ORTHO05D007059 1.4e-30 136.7 121 61.2
TPR.G17220 Trifolium pratense HOM05D005659 ORTHO05D007059 1.4e-30 136.7 121 60.3
Actinidia35474 Actinidia chinensis HOM05D005659 ORTHO05D007059 6.9e-30 134.4 118 59.3
Lsat_1_v5_gn_7_85921 Lactuca sativa HOM05D005659 ORTHO05D007059 2.0e-29 132.9 120 59.2
SEGI_08129 Sequoiadendron giganteum HOM05D005659 ORTHO05D007059 2.0e-29 132.9 118 59.3
Rhsim01G0203000 Rhododendron simsii HOM05D005659 ORTHO05D007059 9.9e-29 130.6 113 59.3
HPP92_009876 Vanilla planifolia HOM05D005659 ORTHO05D007059 9.9e-29 130.6 122 59.0
BraA08t35432Z Brassica rapa HOM05D005659 ORTHO05D007059 1.3e-28 130.2 108 62.0
Nitab4.5_0005472g0080 Nicotiana tabacum HOM05D005659 ORTHO05D007059 1.3e-28 130.2 118 61.9
Duzib170G0332 Durio zibethinus HOM05D005659 ORTHO05D007059 1.7e-28 129.8 120 58.3
EL10Ac4g08170 Beta vulgaris HOM05D005659 ORTHO05D007059 3.8e-28 128.6 86 68.6
C08p03620 Brassica napus HOM05D005659 ORTHO05D007059 7.1e-27 124.4 85 65.9
Pp3c15_16690 Physcomitrium patens HOM05D005659 ORTHO05D007059 7.1e-27 124.4 122 56.6
Ah.08g223250 Amaranthus hybridus HOM05D005659 ORTHO05D007059 9.3e-27 124.0 122 58.2
vmacro14338 Vaccinium macrocarpon HOM05D005659 ORTHO05D007059 2.7e-26 122.5 123 53.7
Mapoly0064s0077 Marchantia polymorpha HOM05D005659 ORTHO05D007059 6.0e-26 121.3 122 55.7
Os04g0414700 Oryza sativa ssp. japonica HOM05D005659 ORTHO05D007059 7.9e-26 120.9 116 56.9
Pp3c15_16700 Physcomitrium patens HOM05D005659 ORTHO05D007059 1.0e-25 120.6 122 55.7
Zm00001eb083680 Zea mays HOM05D005659 ORTHO05D007059 2.1e-23 112.8 76 67.1
ClCG01G011760 Citrullus lanatus HOM05D005659 ORTHO05D007059 1.8e-22 109.8 58 82.8
SMO163G0051 Selaginella moellendorffii HOM05D005659 ORTHO05D007059 3.1e-22 109.0 61 77.0
Nitab4.5_0000937g0110 Nicotiana tabacum HOM05D005659 ORTHO05D007059 1.5e-21 106.7 56 80.4
Manes.11G164551 Manihot esculenta HOM05D005659 ORTHO05D007059 9.3e-19 97.4 93 59.1
BcaB03g13340 Brassica carinata HOM05D005659 ORTHO05D007059 4.1e-14 82.0 89 47.2
Nitab4.5_0003068g0060 Nicotiana tabacum HOM05D005659 ORTHO05D007059 4.5e-13 78.6 87 56.3
MD11G1234000 Malus domestica HOM05D005659 ORTHO05D007059 8.5e-12 74.3 78 60.3
unitig_88.g27645 Utricularia gibba HOM05D005659 ORTHO05D007059 1.4e-11 73.6 74 54.1
MD17G1209900 Malus domestica HOM05D005659 ORTHO05D007059 3.2e-11 72.4 77 59.7
Cre07.g334550 Chlamydomonas reinhardtii HOM05D005659 ORTHO05D007059 2.7e-10 69.3 106 37.7
Gohir.A07G111250 Gossypium hirsutum HOM05D005659 ORTHO05D007059 3.9e-09 65.5 71 52.1
MCO01G581 Micromonas commoda HOM05D005659 ORTHO05D007059 6.3e-07 58.2 112 33.0


User provided reference genes

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