Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g14193 Nelumbo nucifera HOM05D000892 ORTHO05D000750 8.2e-85 317.0 159 100.0
TAR623G1341 Trochodendron aralioides HOM05D000892 ORTHO05D000750 1.1e-33 147.1 119 67.2
TAR369G0336 Trochodendron aralioides HOM05D000892 ORTHO05D000750 1.2e-27 127.1 119 63.0
TAR636G1237 Trochodendron aralioides HOM05D000892 ORTHO05D000750 1.3e-26 123.6 124 59.7
TAR633G1915 Trochodendron aralioides HOM05D000892 ORTHO05D000750 1.4e-23 113.6 121 57.9
Prupe.7G104200 Prunus persica HOM05D000892 ORTHO05D000750 3.0e-18 95.9 120 49.2
Thecc.05G091200 Theobroma cacao HOM05D000892 ORTHO05D000750 8.7e-18 94.4 129 46.5
PSO339G6583 Papaver somniferum HOM05D000892 ORTHO05D000750 2.5e-17 92.8 116 50.9
Ciclev10011475m.g Citrus clementina HOM05D000892 ORTHO05D000750 5.6e-17 91.7 93 57.0
Sabra06G0162800 Salix brachista HOM05D000892 ORTHO05D000750 1.3e-16 90.5 120 46.7
CANSAT64G1460 Cannabis sativa HOM05D000892 ORTHO05D000750 4.8e-16 88.6 119 47.1
PSO384G3634 Papaver somniferum HOM05D000892 ORTHO05D000750 8.1e-16 87.8 116 50.9
Dinv21194 Davidia involucrata HOM05D000892 ORTHO05D000750 2.4e-15 86.3 118 50.0
Aqoxy2G01108 Aquilegia oxysepala HOM05D000892 ORTHO05D000750 3.1e-15 85.9 115 48.7
Duzib128G1127 Durio zibethinus HOM05D000892 ORTHO05D000750 3.1e-15 85.9 120 45.0
MBI17_g08324_MAGBIO Magnolia biondii HOM05D000892 ORTHO05D000750 5.3e-15 85.1 122 50.8
Manes.08G026700 Manihot esculenta HOM05D000892 ORTHO05D000750 9.0e-15 84.3 87 52.9
GSVIVG01033865001 Vitis vinifera HOM05D000892 ORTHO05D000750 1.5e-14 83.6 118 45.8
MD12G1027300 Malus domestica HOM05D000892 ORTHO05D000750 4.4e-14 82.0 113 46.0
Potri.006G211200 Populus trichocarpa HOM05D000892 ORTHO05D000750 5.8e-14 81.6 93 50.5
CSS0040257 Camellia sinensis var. sinensis HOM05D000892 ORTHO05D000750 1.3e-13 80.5 91 54.9
Manes.09G054000 Manihot esculenta HOM05D000892 ORTHO05D000750 1.3e-13 80.5 122 45.9
COL.COLO4_29701 Corchorus olitorius HOM05D000892 ORTHO05D000750 2.2e-13 79.7 123 42.3
CiPaw.09G015500 Carya illinoinensis HOM05D000892 ORTHO05D000750 2.9e-13 79.3 117 43.6
FAN05G5599 Fragaria x ananassa HOM05D000892 ORTHO05D000750 2.9e-13 79.3 124 45.2
Potri.016G078200 Populus trichocarpa HOM05D000892 ORTHO05D000750 2.9e-13 79.3 129 41.9
Haze_19629 Corylus avellana HOM05D000892 ORTHO05D000750 3.8e-13 79.0 119 47.1
FvH4_6g19150 Fragaria vesca HOM05D000892 ORTHO05D000750 3.8e-13 79.0 120 46.7
FAN02G0202 Fragaria x ananassa HOM05D000892 ORTHO05D000750 4.9e-13 78.6 120 46.7
TWI77G0282 Tripterygium wilfordii HOM05D000892 ORTHO05D000750 4.9e-13 78.6 109 46.8
QL07p038596 Quercus lobata HOM05D000892 ORTHO05D000750 6.4e-13 78.2 130 41.5
Haze_23363 Corylus avellana HOM05D000892 ORTHO05D000750 8.4e-13 77.8 91 52.7
FAN14G3756 Fragaria x ananassa HOM05D000892 ORTHO05D000750 8.4e-13 77.8 124 44.4
Cfa010004 Carpinus fangiana HOM05D000892 ORTHO05D000750 1.1e-12 77.4 128 43.8
Thecc.09G281700 Theobroma cacao HOM05D000892 ORTHO05D000750 1.4e-12 77.0 106 44.3
Atru.chr8.1476 Acer truncatum HOM05D000892 ORTHO05D000750 2.4e-12 76.3 118 43.2
TWI74G1188 Tripterygium wilfordii HOM05D000892 ORTHO05D000750 7.1e-12 74.7 104 45.2
Lj2A139G35 Lonicera japonica HOM05D000892 ORTHO05D000750 9.3e-12 74.3 108 45.4
MD14G1027500 Malus domestica HOM05D000892 ORTHO05D000750 1.2e-11 73.9 116 41.4
Cfa016624 Carpinus fangiana HOM05D000892 ORTHO05D000750 1.6e-11 73.6 119 47.1
CSS0030831 Camellia sinensis var. sinensis HOM05D000892 ORTHO05D012816 2.1e-11 73.2 124 42.7
Duzib170G0629 Durio zibethinus HOM05D000892 ORTHO05D000750 2.7e-11 72.8 91 47.3
QL01p012113 Quercus lobata HOM05D000892 ORTHO05D000750 4.6e-11 72.0 104 45.2
Sabra16G0082700 Salix brachista HOM05D000892 ORTHO05D000750 4.6e-11 72.0 119 42.0
FAN09G3508 Fragaria x ananassa HOM05D000892 ORTHO05D000750 7.9e-11 71.2 120 45.0
Manes.11G162500 Manihot esculenta HOM05D000892 ORTHO05D000750 7.9e-11 71.2 87 46.0
vmacro08869 Vaccinium macrocarpon HOM05D000892 ORTHO05D000750 1.0e-10 70.9 84 45.2
CiPaw.10G011100 Carya illinoinensis HOM05D000892 ORTHO05D000750 1.3e-10 70.5 105 44.8
RcHm_v2.0_Chr3g0474261 Rosa chinensis HOM05D000892 ORTHO05D000750 1.3e-10 70.5 115 45.2
TWI31G0917 Tripterygium wilfordii HOM05D000892 ORTHO05D000750 5.1e-10 68.6 88 45.5
CSS0027067 Camellia sinensis var. sinensis HOM05D000892 ORTHO05D000750 6.6e-10 68.2 73 57.5
Rhsim04G0132600 Rhododendron simsii HOM05D000892 ORTHO05D000750 1.1e-09 67.4 85 47.1
Gohir.A05G080100 Gossypium hirsutum HOM05D000892 ORTHO05D000750 1.5e-09 67.0 93 47.3
CSS0024563 Camellia sinensis var. sinensis HOM05D000892 ORTHO05D000750 2.5e-09 66.2 86 51.2
Ciclev10028229m.g Citrus clementina HOM05D000892 ORTHO05D000750 2.5e-09 66.2 91 48.4
Hma1.2p1_0587F.1_g184210 Hydrangea macrophylla HOM05D000892 ORTHO05D000750 2.5e-09 66.2 87 48.3
Gorai.006G154600 Gossypium raimondii HOM05D000892 ORTHO05D000750 4.3e-09 65.5 120 38.3
Gohir.D05G083000 Gossypium hirsutum HOM05D000892 ORTHO05D000750 5.6e-09 65.1 93 46.2
TWI79G0474 Tripterygium wilfordii HOM05D000892 ORTHO05D000750 7.3e-09 64.7 96 41.7
Gohir.D09G134700 Gossypium hirsutum HOM05D000892 ORTHO05D000750 9.6e-09 64.3 120 37.5
Gorai.009G084800 Gossypium raimondii HOM05D000892 ORTHO05D000750 9.6e-09 64.3 93 45.2
PSO801G0361 Papaver somniferum HOM05D000892 ORTHO05D000750 9.6e-09 64.3 103 48.5
Cpa.g.sc5.2 Carica papaya HOM05D000892 ORTHO05D000750 1.6e-08 63.5 119 35.3
PSO339G4379 Papaver somniferum HOM05D000892 ORTHO05D000750 4.8e-08 62.0 103 46.6
Duzib168G1645 Durio zibethinus HOM05D000892 ORTHO05D000750 6.2e-08 61.6 90 43.3
CsaV3_3G037380 Cucumis sativus L. HOM05D000892 ORTHO05D000750 1.1e-07 60.8 121 36.4
Potri.009G162900 Populus trichocarpa HOM05D000892 ORTHO05D000750 1.1e-07 60.8 90 44.4
GSVIVG01036109001 Vitis vinifera HOM05D000892 ORTHO05D000750 1.1e-07 60.8 54 61.1
Prupe.6G132400 Prunus persica HOM05D000892 ORTHO05D000750 1.8e-07 60.1 87 43.7
ClCG10G018860 Citrullus lanatus HOM05D000892 ORTHO05D000750 2.4e-07 59.7 122 35.2
MD03G1147700 Malus domestica HOM05D000892 ORTHO05D000750 3.1e-07 59.3 88 44.3
DCAR_020739 Daucus carota HOM05D000892 ORTHO05D000750 4.0e-07 58.9 95 43.2
Gohir.D09G095600 Gossypium hirsutum HOM05D000892 ORTHO05D000750 4.0e-07 58.9 127 34.6
CDE08G1061 Ceratophyllum demersum HOM05D000892 ORTHO05D000750 5.3e-07 58.5 87 48.3
Gorai.006G112300 Gossypium raimondii HOM05D000892 ORTHO05D000750 5.3e-07 58.5 106 37.7
MD11G1166500 Malus domestica HOM05D000892 ORTHO05D000750 6.9e-07 58.2 87 43.7
CiPaw.13G134800 Carya illinoinensis HOM05D000892 ORTHO05D000750 9.0e-07 57.8 120 42.5
Gohir.A09G095900 Gossypium hirsutum HOM05D000892 ORTHO05D000750 9.0e-07 57.8 106 36.8
Sabra09G0127100 Salix brachista HOM05D000892 ORTHO05D000750 9.0e-07 57.8 114 38.6
Ca_09015_v3 Cicer arietinum L. HOM05D000892 ORTHO05D000750 1.5e-06 57.0 130 33.1
Dinv31699 Davidia involucrata HOM05D000892 ORTHO05D000750 1.5e-06 57.0 85 49.4
Glyma.03G197000 Glycine max HOM05D000892 ORTHO05D000750 1.5e-06 57.0 130 33.8
ATR0820G093 Amborella trichopoda HOM05D000892 ORTHO05D000750 2.6e-06 56.2 82 48.8
MSTRG.10374 Avicennia marina HOM05D000892 ORTHO05D000750 2.6e-06 56.2 88 39.8
Nitab4.5_0000692g0210 Nicotiana tabacum HOM05D000892 ORTHO05D000750 2.6e-06 56.2 104 34.6
MELO3C009482.2 Cucumis melo HOM05D000892 ORTHO05D000750 3.4e-06 55.8 122 34.4
Phvul.011G094900 Phaseolus vulgaris HOM05D000892 ORTHO05D000750 5.8e-06 55.1 60 53.3
Dinv22834 Davidia involucrata HOM05D000892 ORTHO05D000750 9.9e-06 54.3 66 47.0
Duzib093G1831 Durio zibethinus HOM05D000892 ORTHO05D000750 9.9e-06 54.3 118 36.4


User provided reference genes

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