Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g14036 Nelumbo nucifera HOM05D007994 ORTHO05D010092 3.2e-52 208.0 95 100.0
TAR623G0693 Trochodendron aralioides HOM05D007994 ORTHO05D010092 1.4e-34 149.4 103 64.1
Aqoxy4G02880 Aquilegia oxysepala HOM05D007994 ORTHO05D010092 1.4e-31 139.4 102 60.8
Dinv12515 Davidia involucrata HOM05D007994 ORTHO05D010092 7.0e-31 137.1 99 64.6
QL01p013577 Quercus lobata HOM05D007994 ORTHO05D010092 2.0e-30 135.6 102 59.8
PSO339G3278 Papaver somniferum HOM05D007994 ORTHO05D010092 5.9e-30 134.0 77 68.8
GSVIVG01031390001 Vitis vinifera HOM05D007994 ORTHO05D010092 1.0e-29 133.3 104 58.7
Manes.11G158100 Manihot esculenta HOM05D007994 ORTHO05D010092 5.0e-29 131.0 102 59.8
Cfa010076 Carpinus fangiana HOM05D007994 ORTHO05D010092 8.5e-29 130.2 101 57.4
Potri.009G148200 Populus trichocarpa HOM05D007994 ORTHO05D010092 1.5e-28 129.4 103 57.3
TWI75G1300 Tripterygium wilfordii HOM05D007994 ORTHO05D010092 3.2e-28 128.3 103 56.3
MD03G1135900 Malus domestica HOM05D007994 ORTHO05D010092 4.2e-28 127.9 93 61.3
Sabra09G0116600 Salix brachista HOM05D007994 ORTHO05D010092 4.2e-28 127.9 103 57.3
CiPaw.13G140400 Carya illinoinensis HOM05D007994 ORTHO05D010092 9.4e-28 126.7 99 56.6
CANSAT54G1189 Cannabis sativa HOM05D007994 ORTHO05D010092 6.1e-27 124.0 93 58.1
ClCG01G012620 Citrullus lanatus HOM05D007994 ORTHO05D010092 6.1e-27 124.0 100 57.0
THA.LOC104814803 Tarenaya hassleriana HOM05D007994 ORTHO05D010092 6.1e-27 124.0 93 57.0
Duzib168G2077 Durio zibethinus HOM05D007994 ORTHO05D010092 1.0e-26 123.2 97 58.8
vmacro14359 Vaccinium macrocarpon HOM05D007994 ORTHO05D010092 1.4e-26 122.9 99 58.6
Gohir.A09G093700 Gossypium hirsutum HOM05D007994 ORTHO05D010092 3.0e-26 121.7 97 58.8
Prupe.6G120200 Prunus persica HOM05D007994 ORTHO05D010092 3.0e-26 121.7 99 58.6
MELO3C004786.2 Cucumis melo HOM05D007994 ORTHO05D010092 4.0e-26 121.3 100 54.0
Thecc.09G290600 Theobroma cacao HOM05D007994 ORTHO05D010092 5.2e-26 120.9 97 56.7
Duzib170G0069 Durio zibethinus HOM05D007994 ORTHO05D010092 6.7e-26 120.6 83 62.7
Gorai.006G110000 Gossypium raimondii HOM05D007994 ORTHO05D010092 1.2e-25 119.8 79 65.8
CsaV3_1G014550 Cucumis sativus L. HOM05D007994 ORTHO05D010092 1.5e-25 119.4 100 55.0
Gohir.D09G093400 Gossypium hirsutum HOM05D007994 ORTHO05D010092 1.5e-25 119.4 97 58.8
Cc01_g09740 Coffea canephora HOM05D007994 ORTHO05D010092 5.7e-25 117.5 101 55.4
Sed0020093 Sechium edule HOM05D007994 ORTHO05D010092 7.5e-25 117.1 101 55.4
Eucgr.J00433 Eucalyptus grandis HOM05D007994 ORTHO05D010092 2.2e-24 115.5 82 57.3
PSO384G4503 Papaver somniferum HOM05D007994 ORTHO05D010092 2.2e-24 115.5 67 67.2
Atru.chr3.3364 Acer truncatum HOM05D007994 ORTHO05D010092 2.8e-24 115.2 82 64.6
Haze_23442 Corylus avellana HOM05D007994 ORTHO05D010092 2.8e-24 115.2 71 66.2
COL.COLO4_19306 Corchorus olitorius HOM05D007994 ORTHO05D010092 3.7e-24 114.8 98 55.1
RcHm_v2.0_Chr5g0054991 Rosa chinensis HOM05D007994 ORTHO05D010092 3.7e-24 114.8 103 50.5
MSTRG.12356 Avicennia marina HOM05D007994 ORTHO05D010092 4.8e-24 114.4 91 52.7
Rhsim01G0207500 Rhododendron simsii HOM05D007994 ORTHO05D010092 1.6e-22 109.4 73 61.6
Migut.N02511 Erythranthe guttata HOM05D007994 ORTHO05D010092 3.8e-21 104.8 80 55.0
Glyma.11G188500 Glycine max HOM05D007994 ORTHO05D010092 5.5e-20 100.9 92 53.3
Ciclev10029500m.g Citrus clementina HOM05D007994 ORTHO05D010092 7.2e-20 100.5 105 49.5
PGSC0003DMG400026538 Solanum tuberosum HOM05D007994 ORTHO05D010092 1.2e-19 99.8 96 51.0
FAN16G1405 Fragaria x ananassa HOM05D007994 ORTHO05D010092 2.1e-19 99.0 104 46.2
Phvul.005G126500 Phaseolus vulgaris HOM05D007994 ORTHO05D010092 2.1e-19 99.0 95 48.4
VMungo1080G0008 Vigna mungo HOM05D007994 ORTHO05D010092 2.7e-19 98.6 110 45.5
Solyc11g066940.2 Solanum lycopersicum HOM05D007994 ORTHO05D010092 3.6e-19 98.2 89 51.7
Actinidia35451 Actinidia chinensis HOM05D000078 ORTHO05D010092 4.7e-19 97.8 71 60.6
Phvul.011G091200 Phaseolus vulgaris HOM05D007994 ORTHO05D010092 8.0e-19 97.1 101 48.5
Sopen11g026660 Solanum pennellii HOM05D007994 ORTHO05D010092 1.4e-18 96.3 89 51.7
VMungo1127G0625 Vigna mungo HOM05D007994 ORTHO05D010092 2.3e-18 95.5 74 55.4
PGR119G1356 Punica granatum HOM05D007994 ORTHO05D010092 2.0e-17 92.4 67 55.2
Lalb_Chr19g0136731 Lupinus albus HOM05D007994 ORTHO05D010092 3.4e-17 91.7 95 44.2
Rhsim12G0093900 Rhododendron simsii HOM05D007994 ORTHO05D010092 9.8e-17 90.1 60 63.3
SalBow3G1236 Salvia bowleyana HOM05D007994 ORTHO05D010092 1.1e-15 86.7 44 77.3
AT3G44716 Arabidopsis thaliana HOM05D007994 ORTHO05D010092 9.1e-15 83.6 85 38.8
Lj3g0008283 Lotus japonicus HOM05D007994 ORTHO05D010092 3.5e-14 81.6 102 42.2
Peaxi162Scf00002g05422 Petunia axillaris HOM05D007994 ORTHO05D010092 3.5e-14 81.6 81 51.9
SEGI_15329 Sequoiadendron giganteum HOM05D007994 ORTHO05D010092 1.0e-13 80.1 81 39.5
ATR0820G083 Amborella trichopoda HOM05D007994 ORTHO05D010092 1.3e-13 79.7 57 50.9
AL5G22890 Arabidopsis lyrata HOM05D007994 ORTHO05D010092 2.9e-13 78.6 85 38.8
TPR.G15591 Trifolium pratense HOM05D007994 ORTHO05D010092 3.8e-13 78.2 79 48.1
Carub.0005s1038 Capsella rubella HOM05D007994 ORTHO05D010092 5.0e-13 77.8 74 47.3
Carub.0015s0006 Capsella rubella HOM05D007994 ORTHO05D010092 5.0e-13 77.8 74 47.3
BcaC01g02012 Brassica carinata HOM05D007994 ORTHO05D010092 1.1e-12 76.6 72 44.4
C03p69540 Brassica napus HOM05D007994 ORTHO05D010092 1.1e-12 76.6 72 44.4
BolC3t19209H Brassica oleracea HOM05D007994 ORTHO05D010092 1.1e-12 76.6 72 44.4
FAN11G1628 Fragaria x ananassa HOM05D007994 ORTHO05D010092 1.1e-12 76.6 77 46.8
Oeu058281.1 Olea europaea HOM05D007994 ORTHO05D010092 1.1e-12 76.6 58 56.9
BcaB01g01144 Brassica carinata HOM05D007994 ORTHO05D010092 2.5e-12 75.5 66 47.0
A06p21760 Brassica napus HOM05D007994 ORTHO05D010092 3.2e-12 75.1 72 43.1
BraA06t25263Z Brassica rapa HOM05D007994 ORTHO05D010092 3.2e-12 75.1 72 43.1
CARHR151480 Cardamine hirsuta HOM05D007994 ORTHO05D010092 1.2e-11 73.2 74 41.9
Medtr4g055130 Medicago truncatula HOM05D007994 ORTHO05D010092 1.6e-11 72.8 72 40.3
Sp5g16480 Schrenkiella parvula HOM05D007994 ORTHO05D010092 2.8e-11 72.0 74 41.9
Medtr4g053310 Medicago truncatula HOM05D007994 ORTHO05D010092 2.4e-07 58.9 47 42.6


User provided reference genes

Program Settings