Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g14019 Nelumbo nucifera HOM05D006718 ORTHO05D008492 0.0e+00 1419.1 710 100.0
TAR369G0954 Trochodendron aralioides HOM05D006718 ORTHO05D008492 3.7e-137 493.0 730 45.8
MBI15_g36944_MAGBIO Magnolia biondii HOM05D006718 ORTHO05D008492 2.5e-109 400.6 745 41.6
Dinv24591 Davidia involucrata HOM05D006718 ORTHO05D008492 8.7e-86 322.4 654 39.9
QL04p050382 Quercus lobata HOM05D006718 ORTHO05D008492 5.3e-83 313.2 717 38.2
Cfa010452 Carpinus fangiana HOM05D006718 ORTHO05D008492 1.3e-81 308.5 653 39.5
Prupe.2G061400 Prunus persica HOM05D006718 ORTHO05D008492 5.0e-81 306.6 716 37.6
Haze_03406 Corylus avellana HOM05D006718 ORTHO05D008492 8.5e-81 305.8 651 39.6
PSO339G3483 Papaver somniferum HOM05D006718 ORTHO05D008492 2.7e-71 274.2 673 36.0
PSO384G1654 Papaver somniferum HOM05D006718 ORTHO05D008492 3.3e-69 267.3 677 35.0
MD02G1263300 Malus domestica HOM05D006718 ORTHO05D008492 7.4e-69 266.2 643 35.8
MD07G1054700 Malus domestica HOM05D006718 ORTHO05D008492 5.0e-65 253.4 669 34.1
TWI38G0042 Tripterygium wilfordii HOM05D006718 ORTHO05D008492 2.5e-64 251.1 615 36.9
Aqoxy1G00086 Aquilegia oxysepala HOM05D006718 ORTHO05D008492 5.5e-64 250.0 666 34.5
Manes.07G082900 Manihot esculenta HOM05D006718 ORTHO05D008492 2.1e-63 248.1 706 34.1
MELO3C019922.2 Cucumis melo HOM05D006718 ORTHO05D008492 6.7e-62 243.0 614 36.3
CiPaw.13G047100 Carya illinoinensis HOM05D006718 ORTHO05D008492 7.4e-61 239.6 505 39.0
Glyma.14G084400 Glycine max HOM05D006718 ORTHO05D008492 2.2e-60 238.0 672 35.0
Atru.chr12.1182 Acer truncatum HOM05D006718 ORTHO05D008492 8.2e-60 236.1 322 50.9
CsaV3_6G004530 Cucumis sativus L. HOM05D006718 ORTHO05D008492 1.6e-58 231.9 613 35.2
CANSAT56G0860 Cannabis sativa HOM05D006718 ORTHO05D008492 5.9e-58 229.9 627 34.4
Phvul.011G216700 Phaseolus vulgaris HOM05D006718 ORTHO05D008492 3.8e-57 227.3 648 35.0
ClCG08G008520 Citrullus lanatus HOM05D006718 ORTHO05D008492 1.5e-56 225.3 711 33.3
Sc09g0004890 Simmondsia chinensis HOM05D006718 ORTHO05D008492 5.5e-56 223.4 687 31.3
GSVIVG01027215001 Vitis vinifera HOM05D006718 ORTHO05D008492 8.0e-55 219.5 509 38.3
Lj7A493G35 Lonicera japonica HOM05D006718 ORTHO05D008492 1.8e-54 218.4 309 48.5
Hund06826 Selenicereus undatus HOM05D006718 ORTHO05D008492 3.0e-54 217.6 547 35.3
Glyma.17G240500 Glycine max HOM05D006718 ORTHO05D008492 1.2e-53 215.7 658 34.5
EL10Ac4g08778 Beta vulgaris HOM05D006718 ORTHO05D008492 9.7e-53 212.6 652 32.5
Thecc.10G129200 Theobroma cacao HOM05D006718 ORTHO05D008492 2.4e-51 208.0 598 35.3
Lalb_Chr25g0284721 Lupinus albus HOM05D006718 ORTHO05D008492 3.1e-51 207.6 587 34.4
RcHm_v2.0_Chr3g0490591 Rosa chinensis HOM05D006718 ORTHO05D008492 9.1e-51 206.1 634 33.4
Duzib128G0030 Durio zibethinus HOM05D006718 ORTHO05D008492 1.2e-50 205.7 407 41.0
Eucgr.J00311 Eucalyptus grandis HOM05D006718 ORTHO05D008492 1.6e-50 205.3 563 36.6
VMungo0647G0438 Vigna mungo HOM05D006718 ORTHO05D008492 1.6e-50 205.3 513 36.5
FAN19G2415 Fragaria x ananassa HOM05D006718 ORTHO05D008492 2.7e-50 204.5 639 31.9
AUR62014308 Chenopodium quinoa HOM05D006718 ORTHO05D008492 3.5e-50 204.1 503 37.8
AUR62034103 Chenopodium quinoa HOM05D006718 ORTHO05D008492 7.7e-50 203.0 506 36.8
FAN23G2020 Fragaria x ananassa HOM05D006718 ORTHO05D008492 7.7e-50 203.0 642 33.5
Potri.010G246500 Populus trichocarpa HOM05D006718 ORTHO05D008492 1.1e-48 199.1 754 30.0
Ciclev10015184m.g Citrus clementina HOM05D006718 ORTHO05D008492 4.2e-48 197.2 502 37.1
Sabra10G0192200 Salix brachista HOM05D006718 ORTHO05D008492 4.2e-48 197.2 349 41.0
CSS0042038 Camellia sinensis var. sinensis HOM05D006718 ORTHO05D008492 1.6e-47 195.3 280 48.6
DCAR_006628 Daucus carota HOM05D006718 ORTHO05D008492 2.1e-47 194.9 276 43.1
FvH4_1g30390 Fragaria vesca HOM05D006718 ORTHO05D008492 2.7e-47 194.5 641 31.5
Gohir.A06G171400 Gossypium hirsutum HOM05D006718 ORTHO05D008492 8.0e-47 193.0 415 38.3
FAN28G2084 Fragaria x ananassa HOM05D006718 ORTHO05D008492 1.4e-46 192.2 651 32.3
Lj3g0008993 Lotus japonicus HOM05D006718 ORTHO05D008492 1.4e-46 192.2 650 33.7
Cc02_g32070 Coffea canephora HOM05D006718 ORTHO05D008492 3.0e-46 191.0 420 38.1
MSTRG.5086 Avicennia marina HOM05D006718 ORTHO05D008492 6.8e-46 189.9 524 33.8
SGA_v2.0_scaffold196G40987 Striga asiatica HOM05D006718 ORTHO05D008492 1.5e-45 188.7 488 33.8
Sed0008467 Sechium edule HOM05D006718 ORTHO05D008492 5.7e-45 186.8 648 31.8
Rhsim01G0121600 Rhododendron simsii HOM05D006718 ORTHO05D008492 1.7e-44 185.3 742 32.1
Sabra08G0007500 Salix brachista HOM05D006718 ORTHO05D008492 2.2e-44 184.9 745 30.6
Migut.O00435 Erythranthe guttata HOM05D006718 ORTHO05D008492 3.7e-44 184.1 547 34.6
Nitab4.5_0001611g0090 Nicotiana tabacum HOM05D006718 ORTHO05D008492 6.3e-44 183.3 723 31.1
Peaxi162Scf00647g00315 Petunia axillaris HOM05D006718 ORTHO05D008492 8.3e-44 183.0 638 32.0
Ca_03601_v3 Cicer arietinum L. HOM05D006718 ORTHO05D008492 1.4e-43 182.2 529 34.4
Sopen01g040630 Solanum pennellii HOM05D006718 ORTHO05D008492 1.4e-43 182.2 699 31.3
Migut.N01880 Erythranthe guttata HOM05D006718 ORTHO05D008492 1.2e-42 179.1 227 48.5
Gohir.D06G179500 Gossypium hirsutum HOM05D006718 ORTHO05D008492 5.9e-42 176.8 482 35.7
Thhalv10013325m.g Eutrema salsugineum HOM05D006718 ORTHO05D008492 1.3e-41 175.6 291 41.6
Gorai.010G210100 Gossypium raimondii HOM05D006718 ORTHO05D008492 1.3e-41 175.6 482 35.7
HPP92_007508 Vanilla planifolia HOM05D006718 ORTHO05D008492 1.3e-41 175.6 487 33.7
Solyc01g096920.3 Solanum lycopersicum HOM05D006718 ORTHO05D008492 1.7e-41 175.3 740 30.3
Nitab4.5_0005056g0030 Nicotiana tabacum HOM05D006718 ORTHO05D008492 1.1e-40 172.6 438 36.3
Ah.06g191200 Amaranthus hybridus HOM05D006718 ORTHO05D008492 3.3e-40 171.0 313 39.6
Lsat_1_v5_gn_4_139420 Lactuca sativa HOM05D006718 ORTHO05D008492 3.3e-40 171.0 584 32.5
SalBow4G0879 Salvia bowleyana HOM05D006718 ORTHO05D008492 5.5e-40 170.2 517 34.0
PGSC0003DMG400027524 Solanum tuberosum HOM05D006718 ORTHO05D008492 5.5e-40 170.2 749 30.2
CAN.G134.56 Capsicum annuum HOM05D006718 ORTHO05D008492 2.8e-39 167.9 656 31.1
AT5G18440 Arabidopsis thaliana HOM05D006718 ORTHO05D008492 3.6e-39 167.5 318 40.6
COL.COLO4_28900 Corchorus olitorius HOM05D006718 ORTHO05D008492 4.7e-39 167.2 313 37.7
THA.LOC104811338 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 1.8e-38 165.2 425 33.6
Potri.008G012250 Populus trichocarpa HOM05D006718 ORTHO05D008492 5.2e-38 163.7 392 36.2
TPR.G33809 Trifolium pratense HOM05D006718 ORTHO05D008492 2.0e-37 161.8 542 31.9
PGR044G1203 Punica granatum HOM05D006718 ORTHO05D008492 3.4e-37 161.0 577 32.8
ECA232G4797 Erigeron canadensis HOM05D006718 ORTHO05D008492 2.8e-36 157.9 595 31.9
AL6G29690 Arabidopsis lyrata HOM05D006718 ORTHO05D008492 3.7e-36 157.5 276 39.5
BcaC04g18692 Brassica carinata HOM05D006718 ORTHO05D008492 3.7e-36 157.5 227 44.9
CARHR194580 Cardamine hirsuta HOM05D006718 ORTHO05D008492 1.1e-35 156.0 273 39.2
C09p58250 Brassica napus HOM05D006718 ORTHO05D008492 1.8e-35 155.2 447 33.3
Carub.0006s1670 Capsella rubella HOM05D006718 ORTHO05D008492 3.1e-35 154.5 466 32.4
BolC9t58690H Brassica oleracea HOM05D006718 ORTHO05D008492 4.1e-35 154.1 463 32.8
BcaB08g36679 Brassica carinata HOM05D006718 ORTHO05D008492 7.0e-35 153.3 292 40.4
ATR0068G071 Amborella trichopoda HOM05D006718 ORTHO05D008492 3.5e-34 151.0 633 29.4
FAN26G3384 Fragaria x ananassa HOM05D006718 ORTHO05D008492 7.8e-34 149.8 585 29.9
A10p21140 Brassica napus HOM05D006718 ORTHO05D008492 1.3e-33 149.1 320 35.3
Sp6g25880 Schrenkiella parvula HOM05D006718 ORTHO05D008492 1.3e-33 149.1 501 32.1
Aa31LG11G11170 Aethionema arabicum HOM05D006718 ORTHO05D008492 1.9e-32 145.2 511 30.3
vmacro20846 Vaccinium macrocarpon HOM05D006718 ORTHO05D008492 1.9e-32 145.2 506 31.4
Os01g0814000 Oryza sativa ssp. japonica HOM05D006718 ORTHO05D008492 2.5e-32 144.8 285 40.0
unitig_899.g15585 Utricularia gibba HOM05D006718 ORTHO05D008492 9.5e-32 142.9 400 33.2
HanXRQChr09g0250361 Helianthus annuus HOM05D006718 ORTHO05D008492 2.1e-31 141.7 491 32.2
Medtr2g067220 Medicago truncatula HOM05D006718 ORTHO05D008492 2.8e-31 141.4 578 32.5
Zm00001eb149940 Zea mays HOM05D006718 ORTHO05D008492 3.6e-31 141.0 268 39.9
BraA10t44177Z Brassica rapa HOM05D006718 ORTHO05D008492 3.4e-29 134.4 320 33.4
CDE04G2801 Ceratophyllum demersum HOM05D001339 ORTHO05D003609 9.8e-29 132.9 693 27.6
Cpa.g.sc163.26 Carica papaya HOM05D006718 ORTHO05D008492 1.7e-28 132.1 235 41.3
THA.LOC104824416 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 2.0e-21 108.6 550 28.2
A02p04900 Brassica napus HOM05D006718 ORTHO05D008492 3.9e-17 94.4 250 33.2
Mapoly0025s0136 Marchantia polymorpha HOM05D006718 ORTHO05D008492 4.9e-12 77.4 338 27.5
Pp3c27_4140 Physcomitrium patens HOM05D006718 ORTHO05D008492 2.1e-10 72.0 322 26.7
AagrBONN_evm.TU.Sc2ySwM_344.1162 Anthoceros agrestis HOM05D006718 ORTHO05D008492 7.8e-10 70.1 367 26.4
Psat2g067120 Pisum sativum HOM05D006718 ORTHO05D008492 8.1e-07 60.1 96 43.8
Peaxi162Scf00558g00016 Petunia axillaris HOM05D006718 ORTHO05D008492 2.4e-06 58.5 182 30.2


User provided reference genes

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