Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g13991 Nelumbo nucifera HOM05D002481 ORTHO05D002643 2.3e-48 195.3 100 100.0
TAR633G1373 Trochodendron aralioides HOM05D002481 ORTHO05D002643 3.0e-24 115.2 94 72.3
Aqoxy2G01422 Aquilegia oxysepala HOM05D002481 ORTHO05D002643 1.8e-21 105.9 93 64.5
Aqoxy2G01424 Aquilegia oxysepala HOM05D002481 ORTHO05D002643 1.8e-21 105.9 93 64.5
Dinv29422 Davidia involucrata HOM05D002481 ORTHO05D002643 9.9e-20 100.1 94 63.8
Dinv12526 Davidia involucrata HOM05D002481 ORTHO05D002643 2.2e-19 99.0 92 63.0
TAR623G1331 Trochodendron aralioides HOM05D002481 ORTHO05D002643 4.9e-19 97.8 92 63.0
Lj1P220T16 Lonicera japonica HOM05D002481 ORTHO05D002643 6.4e-19 97.4 95 61.1
Cpa.g.sc47.62 Carica papaya HOM05D002481 ORTHO05D002643 1.1e-18 96.7 96 56.2
Atru.chr3.3386 Acer truncatum HOM05D002481 ORTHO05D002643 7.1e-18 94.0 97 59.8
CSS0045376 Camellia sinensis var. sinensis HOM05D002481 ORTHO05D002643 7.1e-18 94.0 93 60.2
DCAR_018741 Daucus carota HOM05D002481 ORTHO05D002643 1.2e-17 93.2 96 56.2
Cfa010085 Carpinus fangiana HOM05D002481 ORTHO05D002643 1.6e-17 92.8 94 56.4
Hma1.2p1_1264F.1_g271310 Hydrangea macrophylla HOM05D002481 ORTHO05D002643 2.1e-17 92.4 91 59.3
MBI01_g41085_MAGBIO Magnolia biondii HOM05D002481 ORTHO05D002643 1.3e-16 89.7 101 55.4
TWI79G0527 Tripterygium wilfordii HOM05D002481 ORTHO05D002643 1.8e-16 89.4 98 53.1
Manes.11G156800 Manihot esculenta HOM05D002481 ORTHO05D002643 3.0e-16 88.6 95 52.6
SGA_v2.0_scaffold27G11606 Striga asiatica HOM05D002481 ORTHO05D002643 3.0e-16 88.6 94 56.4
CDE08G0576 Ceratophyllum demersum HOM05D000911 ORTHO05D000890 8.7e-16 87.0 95 56.8
Thecc.09G292100 Theobroma cacao HOM05D002481 ORTHO05D002643 8.7e-16 87.0 91 57.1
DCAR_015479 Daucus carota HOM05D002481 ORTHO05D002643 1.1e-15 86.7 94 53.2
Duzib168G2335 Durio zibethinus HOM05D002481 ORTHO05D002643 1.5e-15 86.3 91 58.2
Manes.04G009100 Manihot esculenta HOM05D002481 ORTHO05D002643 3.3e-15 85.1 95 50.5
Nitab4.5_0001453g0050 Nicotiana tabacum HOM05D002481 ORTHO05D002643 3.3e-15 85.1 93 61.3
BcaB02g10121 Brassica carinata HOM05D002481 ORTHO05D002643 4.3e-15 84.7 99 51.5
BcaC02g10910 Brassica carinata HOM05D002481 ORTHO05D002643 4.3e-15 84.7 99 51.5
C04p23760 Brassica napus HOM05D002481 ORTHO05D002643 4.3e-15 84.7 99 51.5
BolC4t23874H Brassica oleracea HOM05D002481 ORTHO05D002643 4.3e-15 84.7 99 51.5
Gohir.A07G107000 Gossypium hirsutum HOM05D002481 ORTHO05D002643 4.3e-15 84.7 92 56.5
CiPaw.14G103800 Carya illinoinensis HOM05D002481 ORTHO05D002643 5.6e-15 84.3 92 55.4
Haze_23454 Corylus avellana HOM05D002481 ORTHO05D002643 5.6e-15 84.3 94 55.3
PGSC0003DMG400028068 Solanum tuberosum HOM05D002481 ORTHO05D002643 5.6e-15 84.3 98 54.1
CAN.G386.31 Capsicum annuum HOM05D002481 ORTHO05D002643 7.4e-15 84.0 98 54.1
Potri.004G188600 Populus trichocarpa HOM05D002481 ORTHO05D002643 7.4e-15 84.0 97 51.5
MSTRG.21066 Avicennia marina HOM05D002481 ORTHO05D002643 9.6e-15 83.6 99 52.5
Gohir.D07G111000 Gossypium hirsutum HOM05D002481 ORTHO05D002643 1.3e-14 83.2 91 57.1
Gorai.001G119300 Gossypium raimondii HOM05D002481 ORTHO05D002643 1.3e-14 83.2 91 57.1
Rhsim01G0208500 Rhododendron simsii HOM05D002481 ORTHO05D002643 1.3e-14 83.2 95 52.6
Solyc01g009430.3 Solanum lycopersicum HOM05D002481 ORTHO05D002643 1.3e-14 83.2 98 53.1
vmacro14373 Vaccinium macrocarpon HOM05D002481 ORTHO05D002643 1.3e-14 83.2 95 56.8
A07p18420 Brassica napus HOM05D002481 ORTHO05D002643 2.1e-14 82.4 99 50.5
BraA07t29558Z Brassica rapa HOM05D002481 ORTHO05D002643 2.1e-14 82.4 99 50.5
COL.COLO4_19291 Corchorus olitorius HOM05D002481 ORTHO05D002643 2.1e-14 82.4 91 57.1
Lsat_1_v5_gn_6_41140 Lactuca sativa HOM05D002481 ORTHO05D002643 2.8e-14 82.0 77 58.4
Prupe.6G118800 Prunus persica HOM05D002481 ORTHO05D002643 2.8e-14 82.0 96 55.2
Ciclev10029315m.g Citrus clementina HOM05D002481 ORTHO05D002643 3.7e-14 81.6 94 50.0
Duzib150G0893 Durio zibethinus HOM05D002481 ORTHO05D002643 3.7e-14 81.6 91 56.0
ECA233G6110 Erigeron canadensis HOM05D002481 ORTHO05D002643 3.7e-14 81.6 80 61.2
Gohir.D09G092800 Gossypium hirsutum HOM05D002481 ORTHO05D002643 3.7e-14 81.6 91 54.9
ECA238G4288 Erigeron canadensis HOM05D002481 ORTHO05D002643 4.8e-14 81.3 93 52.7
Gohir.A09G092800 Gossypium hirsutum HOM05D002481 ORTHO05D002643 4.8e-14 81.3 91 54.9
HanXRQChr14g0451951 Helianthus annuus HOM05D002481 ORTHO05D002643 4.8e-14 81.3 91 54.9
AL4G22410 Arabidopsis lyrata HOM05D002481 ORTHO05D002643 6.2e-14 80.9 96 51.0
AT2G27830 Arabidopsis thaliana HOM05D002481 ORTHO05D002643 6.2e-14 80.9 96 51.0
HanXRQChr13g0396941 Helianthus annuus HOM05D002481 ORTHO05D002643 6.2e-14 80.9 94 50.0
Sopen01g004940 Solanum pennellii HOM05D002481 ORTHO05D002643 6.2e-14 80.9 98 52.0
Gorai.006G109400 Gossypium raimondii HOM05D002481 ORTHO05D002643 8.1e-14 80.5 91 54.9
Cc01_g09840 Coffea canephora HOM05D002481 ORTHO05D002643 1.1e-13 80.1 107 52.3
Sp4g10670 Schrenkiella parvula HOM05D002481 ORTHO05D002643 1.1e-13 80.1 100 50.0
TWI75G0854 Tripterygium wilfordii HOM05D002481 ORTHO05D002643 1.1e-13 80.1 98 49.0
Lj2C994G1 Lonicera japonica HOM05D002481 ORTHO05D002643 1.4e-13 79.7 90 55.6
Thhalv10017255m.g Eutrema salsugineum HOM05D002481 ORTHO05D002643 1.8e-13 79.3 106 50.0
Lsat_1_v5_gn_2_96420 Lactuca sativa HOM05D002481 ORTHO05D002643 1.8e-13 79.3 91 52.7
Nitab4.5_0007303g0040 Nicotiana tabacum HOM05D002481 ORTHO05D002643 3.1e-13 78.6 93 53.8
Eucgr.J00422 Eucalyptus grandis HOM05D002481 ORTHO05D002643 5.3e-13 77.8 96 54.2
Nitab4.5_0000227g0140 Nicotiana tabacum HOM05D002481 ORTHO05D002643 5.3e-13 77.8 98 53.1
QL01p013807 Quercus lobata HOM05D002481 ORTHO05D002643 6.9e-13 77.4 94 54.3
QL10p041443 Quercus lobata HOM05D002481 ORTHO05D002643 6.9e-13 77.4 94 54.3
MD03G1134500 Malus domestica HOM05D002481 ORTHO05D002643 9.0e-13 77.0 98 53.1
Aa31LG5G8190 Aethionema arabicum HOM05D002481 ORTHO05D002643 1.2e-12 76.6 81 56.8
CANSAT54G1888 Cannabis sativa HOM05D002481 ORTHO05D002643 1.2e-12 76.6 105 49.5
MD11G1156800 Malus domestica HOM05D002481 ORTHO05D002643 1.2e-12 76.6 98 52.0
Sabra04G0129500 Salix brachista HOM05D002481 ORTHO05D002643 1.2e-12 76.6 97 48.5
Solyc11g066860.2 Solanum lycopersicum HOM05D002481 ORTHO05D002643 1.2e-12 76.6 95 51.6
Ca_01681_v3 Cicer arietinum L. HOM05D002481 ORTHO05D002643 1.5e-12 76.3 89 47.2
PSO339G5316 Papaver somniferum HOM05D002481 ORTHO05D002643 1.5e-12 76.3 106 50.9
Sopen11g026570 Solanum pennellii HOM05D002481 ORTHO05D002643 1.5e-12 76.3 96 50.0
SalBow3G3337 Salvia bowleyana HOM05D002481 ORTHO05D002643 2.0e-12 75.9 93 49.5
CsaV3_6G014700 Cucumis sativus L. HOM05D002481 ORTHO05D002643 2.6e-12 75.5 82 56.1
FAN16G0008 Fragaria x ananassa HOM05D002481 ORTHO05D002643 2.6e-12 75.5 97 50.5
PSO063G1260 Papaver somniferum HOM05D002481 ORTHO05D002643 2.6e-12 75.5 105 49.5
RcHm_v2.0_Chr5g0055301 Rosa chinensis HOM05D002481 ORTHO05D002643 2.6e-12 75.5 100 52.0
Migut.D02335 Erythranthe guttata HOM05D002481 ORTHO05D002643 3.4e-12 75.1 100 47.0
Potri.009G149200 Populus trichocarpa HOM05D002481 ORTHO05D002643 3.4e-12 75.1 96 46.9
THA.LOC104826403 Tarenaya hassleriana HOM05D002481 ORTHO05D002643 3.4e-12 75.1 102 49.0
MSTRG.12354 Avicennia marina HOM05D002481 ORTHO05D002643 4.5e-12 74.7 98 46.9
CSS0011054 Camellia sinensis var. sinensis HOM05D002481 ORTHO05D002643 4.5e-12 74.7 74 59.5
FvH4_3g29930 Fragaria vesca HOM05D002481 ORTHO05D002643 4.5e-12 74.7 98 52.0
FAN11G0077 Fragaria x ananassa HOM05D002481 ORTHO05D002643 4.5e-12 74.7 98 52.0
CAN.G919.6 Capsicum annuum HOM05D002481 ORTHO05D002643 5.8e-12 74.3 93 52.7
FAN21G3419 Fragaria x ananassa HOM05D002481 ORTHO05D002643 5.8e-12 74.3 98 52.0
CARHR120530 Cardamine hirsuta HOM05D002481 ORTHO05D002643 7.6e-12 73.9 98 45.9
Nitab4.5_0003082g0010 Nicotiana tabacum HOM05D002481 ORTHO05D002643 7.6e-12 73.9 97 53.6
Oeu050177.2 Olea europaea HOM05D002481 ORTHO05D002643 7.6e-12 73.9 95 48.4
Peaxi162Scf00789g00532 Petunia axillaris HOM05D002481 ORTHO05D002643 7.6e-12 73.9 93 54.8
MELO3C021455.2 Cucumis melo HOM05D002481 ORTHO05D002643 1.0e-11 73.6 82 56.1
PGSC0003DMG400026533 Solanum tuberosum HOM05D002481 ORTHO05D002643 1.0e-11 73.6 96 49.0
Oeu023723.1 Olea europaea HOM05D002481 ORTHO05D002643 1.3e-11 73.2 95 48.4
THA.LOC104800558 Tarenaya hassleriana HOM05D002481 ORTHO05D002643 1.7e-11 72.8 99 47.5
MSTRG.17736 Avicennia marina HOM05D002481 ORTHO05D002643 2.9e-11 72.0 93 49.5
ClCG02G021890 Citrullus lanatus HOM05D002481 ORTHO05D002643 2.9e-11 72.0 79 54.4
Migut.N02516 Erythranthe guttata HOM05D002481 ORTHO05D002643 8.4e-11 70.5 95 49.5
Actinidia37101 Actinidia chinensis HOM05D002481 ORTHO05D002643 1.1e-10 70.1 120 42.5
Eucgr.B03896 Eucalyptus grandis HOM05D002481 ORTHO05D002643 1.4e-10 69.7 99 50.5
SGA_v2.0_scaffold83G26429 Striga asiatica HOM05D002481 ORTHO05D002643 1.4e-10 69.7 100 47.0
Medtr4g055420 Medicago truncatula HOM05D002481 ORTHO05D002643 1.9e-10 69.3 93 47.3
Glyma.12G084900 Glycine max HOM05D002481 ORTHO05D002643 2.5e-10 68.9 95 48.4
PGR119G2131 Punica granatum HOM05D002481 ORTHO05D002643 4.2e-10 68.2 106 46.2
Glyma.11G189400 Glycine max HOM05D002481 ORTHO05D002643 7.1e-10 67.4 98 48.0
Lj3g0000885 Lotus japonicus HOM05D002481 ORTHO05D002643 7.1e-10 67.4 90 45.6
Psat5g254560 Pisum sativum HOM05D002481 ORTHO05D002643 7.1e-10 67.4 90 43.3
MSTRG.18731 Avicennia marina HOM05D002481 ORTHO05D002643 9.3e-10 67.0 96 44.8
EL10Ac9g21073 Beta vulgaris HOM05D002481 ORTHO05D002643 9.3e-10 67.0 78 51.3
Ah.01g004650 Amaranthus hybridus HOM05D002481 ORTHO05D002643 1.2e-09 66.6 78 50.0
Carub.0004s0859 Capsella rubella HOM05D002481 ORTHO05D002643 1.2e-09 66.6 104 46.2
AUR62023942 Chenopodium quinoa HOM05D002481 ORTHO05D002643 1.2e-09 66.6 98 44.9
Lalb_Chr24g0395121 Lupinus albus HOM05D002481 ORTHO05D002643 1.2e-09 66.6 95 43.2
Medtr2g084805 Medicago truncatula HOM05D002481 ORTHO05D002643 1.2e-09 66.6 94 43.6
TPR.G32398 Trifolium pratense HOM05D002481 ORTHO05D002643 1.2e-09 66.6 93 45.2
Aqoxy1G00947 Aquilegia oxysepala HOM05D002481 ORTHO05D002643 2.1e-09 65.9 91 49.5
CAN.G644.33 Capsicum annuum HOM05D002481 ORTHO05D002643 3.5e-09 65.1 96 50.0
Psat7g190800 Pisum sativum HOM05D002481 ORTHO05D002643 3.5e-09 65.1 97 42.3
Phvul.011G090100 Phaseolus vulgaris HOM05D002481 ORTHO05D002643 4.6e-09 64.7 96 46.9
ATR0810G067 Amborella trichopoda HOM05D002481 ORTHO05D002643 7.9e-09 63.9 85 45.9
arahy.Tifrunner.gnm1.ann1.X43XEU Arachis hypogaea HOM05D002481 ORTHO05D002643 7.9e-09 63.9 97 44.3
PGSC0003DMG400007125 Solanum tuberosum HOM05D002481 ORTHO05D002643 7.9e-09 63.9 93 49.5
arahy.Tifrunner.gnm1.ann1.BG7X3L Arachis hypogaea HOM05D002481 ORTHO05D002643 1.8e-08 62.8 97 44.3
Ca_19370_v3 Cicer arietinum L. HOM05D002481 ORTHO05D002643 1.8e-08 62.8 93 43.0
Oeu010651.1 Olea europaea HOM05D002481 ORTHO05D002643 1.8e-08 62.8 94 41.5
Oeu010653.2 Olea europaea HOM05D002481 ORTHO05D002643 2.3e-08 62.4 94 41.5
unitig_747.g21962 Utricularia gibba HOM05D002481 ORTHO05D002643 5.1e-08 61.2 97 42.3
Peaxi162Scf00157g00065 Petunia axillaris HOM05D002481 ORTHO05D002643 1.1e-07 60.1 98 48.0
Sopen06g031030 Solanum pennellii HOM05D002481 ORTHO05D002643 1.5e-07 59.7 93 48.4
TPR.G2619 Trifolium pratense HOM05D002481 ORTHO05D002643 1.5e-07 59.7 93 45.2
Sc12g0004130 Simmondsia chinensis HOM05D002481 ORTHO05D002643 1.9e-07 59.3 78 48.7
arahy.Tifrunner.gnm1.ann1.EQG5N7 Arachis hypogaea HOM05D002481 ORTHO05D002643 2.5e-07 58.9 92 39.1
arahy.Tifrunner.gnm1.ann1.5JH3WA Arachis hypogaea HOM05D002481 ORTHO05D002643 3.3e-07 58.5 92 39.1
PGR102G2678 Punica granatum HOM05D002481 ORTHO05D002643 3.3e-07 58.5 106 39.6
Hund00790 Selenicereus undatus HOM05D002481 ORTHO05D002643 3.3e-07 58.5 83 43.4
Oeu035536.1 Olea europaea HOM05D002481 ORTHO05D002643 4.3e-07 58.2 92 44.6
Solyc06g074620.3 Solanum lycopersicum HOM05D002481 ORTHO05D002643 4.3e-07 58.2 96 49.0
Sc21g0004700 Simmondsia chinensis HOM05D002481 ORTHO05D002643 5.7e-07 57.8 70 54.3
Lalb_Chr22g0350631 Lupinus albus HOM05D002481 ORTHO05D002643 7.4e-07 57.4 95 40.0
Glyma.13G319400 Glycine max HOM05D002481 ORTHO05D002643 9.6e-07 57.0 92 42.4
Lj1g0001045 Lotus japonicus HOM05D000231 ORTHO05D018524 9.6e-07 57.0 77 45.5
Phvul.005G127500 Phaseolus vulgaris HOM05D002481 ORTHO05D002643 9.6e-07 57.0 97 40.2
Ca_11104_v3 Cicer arietinum L. HOM05D002481 ORTHO05D002643 1.3e-06 56.6 93 41.9
MBI12_g10755_MAGBIO Magnolia biondii HOM05D002481 ORTHO05D002643 1.3e-06 56.6 85 43.5
MD11G1156700 Malus domestica HOM05D002481 ORTHO05D002643 1.3e-06 56.6 57 63.2
Oeu035535.1 Olea europaea HOM05D002481 ORTHO05D002643 1.3e-06 56.6 93 44.1
SalBow6G0053 Salvia bowleyana HOM05D002481 ORTHO05D002643 1.6e-06 56.2 94 42.6
Ca_16620_v3 Cicer arietinum L. HOM05D002481 ORTHO05D002643 2.1e-06 55.8 93 40.9
Sabra09G0117800 Salix brachista HOM05D002481 ORTHO05D002643 2.1e-06 55.8 52 59.6
Lj3g0021704 Lotus japonicus HOM05D002481 ORTHO05D002643 2.8e-06 55.5 101 41.6
Ca_16388_v3 Cicer arietinum L. HOM05D002481 ORTHO05D002643 6.2e-06 54.3 92 41.3
Ca_29698_v3 Cicer arietinum L. HOM05D002481 ORTHO05D002643 6.2e-06 54.3 92 41.3


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