Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g13928 Nelumbo nucifera HOM05D006796 ORTHO05D008615 2.0e-49 198.7 97 100.0
Nn4g23271 Nelumbo nucifera HOM05D006796 ORTHO05D008615 6.4e-32 140.6 96 75.0
Manes.05G105900 Manihot esculenta HOM05D006796 ORTHO05D008615 2.1e-30 135.6 98 71.4
CiPaw.07G071700 Carya illinoinensis HOM05D006796 ORTHO05D008615 1.0e-29 133.3 96 71.9
CSS0026382 Camellia sinensis var. sinensis HOM05D006796 ORTHO05D008615 2.3e-29 132.1 96 68.8
Cfa008932 Carpinus fangiana HOM05D006796 ORTHO05D008615 3.9e-29 131.3 96 71.9
Haze_11961 Corylus avellana HOM05D006796 ORTHO05D008615 3.9e-29 131.3 96 71.9
Potri.010G164400 Populus trichocarpa HOM05D006796 ORTHO05D008615 6.7e-29 130.6 96 68.8
QL03p069702 Quercus lobata HOM05D006796 ORTHO05D008615 6.7e-29 130.6 96 68.8
Actinidia19934 Actinidia chinensis HOM05D006796 ORTHO05D008615 1.9e-28 129.0 101 64.4
Sabra10G0124800 Salix brachista HOM05D006796 ORTHO05D008615 4.3e-28 127.9 96 67.7
arahy.Tifrunner.gnm1.ann1.NP20FV Arachis hypogaea HOM05D006796 ORTHO05D008615 7.4e-28 127.1 101 64.4
arahy.Tifrunner.gnm1.ann1.R8NX8D Arachis hypogaea HOM05D006796 ORTHO05D008615 7.4e-28 127.1 101 64.4
GSVIVG01012496001 Vitis vinifera HOM05D006796 ORTHO05D008615 1.6e-27 125.9 100 67.0
COL.COLO4_27978 Corchorus olitorius HOM05D006796 ORTHO05D008615 2.1e-27 125.6 96 65.6
arahy.Tifrunner.gnm1.ann1.T4YGUP Arachis hypogaea HOM05D006796 ORTHO05D008615 3.7e-27 124.8 96 66.7
Thecc.02G339900 Theobroma cacao HOM05D006796 ORTHO05D008615 6.2e-27 124.0 96 65.6
TWI31G0717 Tripterygium wilfordii HOM05D006796 ORTHO05D008615 1.8e-26 122.5 96 67.7
MELO3C002984.2 Cucumis melo HOM05D006796 ORTHO05D008615 2.4e-26 122.1 98 65.3
Lj2g0006920 Lotus japonicus HOM05D006796 ORTHO05D008615 4.0e-26 121.3 96 64.6
ClCG09G022060 Citrullus lanatus HOM05D006796 ORTHO05D008615 5.3e-26 120.9 98 65.3
Phvul.002G103200 Phaseolus vulgaris HOM05D006796 ORTHO05D008615 5.3e-26 120.9 102 62.7
PGR102G1583 Punica granatum HOM05D006796 ORTHO05D008615 5.3e-26 120.9 98 64.3
VMungo1215G0648 Vigna mungo HOM05D006796 ORTHO05D008615 5.3e-26 120.9 102 62.7
CsaV3_5G022970 Cucumis sativus L. HOM05D006796 ORTHO05D008615 6.9e-26 120.6 98 65.3
TAR629G0550 Trochodendron aralioides HOM05D006796 ORTHO05D008615 6.9e-26 120.6 96 64.6
Sed0012383 Sechium edule HOM05D006796 ORTHO05D008615 9.0e-26 120.2 98 65.3
Atru.chr11.1722 Acer truncatum HOM05D006796 ORTHO05D008615 1.5e-25 119.4 96 67.7
Cpa.g.sc1.63 Carica papaya HOM05D006796 ORTHO05D008615 1.5e-25 119.4 96 67.7
Gohir.D04G190901 Gossypium hirsutum HOM05D006796 ORTHO05D008615 1.5e-25 119.4 96 63.5
Gohir.D04G191000 Gossypium hirsutum HOM05D006796 ORTHO05D008615 1.5e-25 119.4 96 63.5
Gorai.012G186400 Gossypium raimondii HOM05D006796 ORTHO05D008615 1.5e-25 119.4 96 63.5
CiPaw.05G129900 Carya illinoinensis HOM05D006796 ORTHO05D008615 2.0e-25 119.0 96 67.7
Lalb_Chr10g0098461 Lupinus albus HOM05D006796 ORTHO05D008615 2.0e-25 119.0 102 61.8
TAR371G0712 Trochodendron aralioides HOM05D006796 ORTHO05D008615 2.6e-25 118.6 96 63.5
Sc11g0002140 Simmondsia chinensis HOM05D006796 ORTHO05D008615 3.4e-25 118.2 101 59.4
Hma1.2p1_0354F.1_g133830 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 4.5e-25 117.9 99 64.6
Dinv34092 Davidia involucrata HOM05D006796 ORTHO05D008615 7.6e-25 117.1 122 53.3
Eucgr.B03198 Eucalyptus grandis HOM05D006796 ORTHO05D008615 9.9e-25 116.7 96 62.5
Glyma.02G111300 Glycine max HOM05D006796 ORTHO05D008615 9.9e-25 116.7 102 60.8
Duzib268G1785 Durio zibethinus HOM05D006796 ORTHO05D008615 1.3e-24 116.3 96 62.5
CDE02G1750 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 1.7e-24 115.9 96 62.5
CANSAT64G1871 Cannabis sativa HOM05D006796 ORTHO05D008615 2.9e-24 115.2 96 61.5
CAN.G964.30 Capsicum annuum HOM05D006796 ORTHO05D008615 2.9e-24 115.2 96 63.5
Glyma.01G052700 Glycine max HOM05D006796 ORTHO05D008615 2.9e-24 115.2 103 60.2
MSTRG.13431 Avicennia marina HOM05D006796 ORTHO05D008615 8.4e-24 113.6 96 62.5
Hund25209 Selenicereus undatus HOM05D006796 ORTHO05D008615 8.4e-24 113.6 96 61.5
Ca_04876_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 1.1e-23 113.2 96 62.5
Ciclev10032381m.g Citrus clementina HOM05D006796 ORTHO05D008615 1.1e-23 113.2 96 63.5
Gohir.1Z049816 Gossypium hirsutum HOM05D006796 ORTHO05D008615 1.1e-23 113.2 79 68.4
PSO017G7370 Papaver somniferum HOM05D006796 ORTHO05D008615 1.1e-23 113.2 96 63.5
Nitab4.5_0000391g0260 Nicotiana tabacum HOM05D006796 ORTHO05D008615 1.9e-23 112.5 96 62.5
Nitab4.5_0004906g0020 Nicotiana tabacum HOM05D006796 ORTHO05D008615 1.9e-23 112.5 96 62.5
Cc11_g12630 Coffea canephora HOM05D006796 ORTHO05D008615 3.2e-23 111.7 88 69.3
Psat2g126440 Pisum sativum HOM05D006796 ORTHO05D008615 3.2e-23 111.7 96 62.5
Lj3A1033T56 Lonicera japonica HOM05D006796 ORTHO05D008615 4.2e-23 111.3 98 61.2
PSO478G1165 Papaver somniferum HOM05D006796 ORTHO05D008615 4.2e-23 111.3 96 63.5
PGSC0003DMG400028345 Solanum tuberosum HOM05D006796 ORTHO05D008615 4.2e-23 111.3 96 62.5
FvH4_4g30770 Fragaria vesca HOM05D006796 ORTHO05D008615 9.3e-23 110.2 96 62.5
FAN07G2185 Fragaria x ananassa HOM05D006796 ORTHO05D008615 9.3e-23 110.2 96 62.5
FAN12G1163 Fragaria x ananassa HOM05D006796 ORTHO05D008615 9.3e-23 110.2 96 62.5
FAN22G2031 Fragaria x ananassa HOM05D006796 ORTHO05D008615 9.3e-23 110.2 96 62.5
Prupe.1G279300 Prunus persica HOM05D006796 ORTHO05D008615 9.3e-23 110.2 96 62.5
RcHm_v2.0_Chr4g0439161 Rosa chinensis HOM05D006796 ORTHO05D008615 9.3e-23 110.2 96 62.5
EL10Ac6g13260 Beta vulgaris HOM05D006796 ORTHO05D008615 1.6e-22 109.4 96 57.3
Sopen05g007830 Solanum pennellii HOM05D006796 ORTHO05D008615 1.6e-22 109.4 96 61.5
Aqoxy3G00482 Aquilegia oxysepala HOM05D006796 ORTHO05D008615 2.1e-22 109.0 98 56.1
Actinidia31964 Actinidia chinensis HOM05D006796 ORTHO05D008615 2.7e-22 108.6 70 74.3
MSTRG.2332 Avicennia marina HOM05D006796 ORTHO05D008615 6.0e-22 107.5 88 63.6
MD13G1068600 Malus domestica HOM05D006796 ORTHO05D008615 1.3e-21 106.3 98 60.2
TPR.G19931 Trifolium pratense HOM05D006796 ORTHO05D008615 1.3e-21 106.3 89 64.0
Migut.L01249 Erythranthe guttata HOM05D006796 ORTHO05D008615 1.8e-21 105.9 96 60.4
SalBow8G2627 Salvia bowleyana HOM05D006796 ORTHO05D008615 5.1e-21 104.4 96 58.3
Thhalv10008453m.g Eutrema salsugineum HOM05D006796 ORTHO05D008615 6.7e-21 104.0 96 60.4
Peaxi162Scf00222g00236 Petunia axillaris HOM05D006796 ORTHO05D008615 6.7e-21 104.0 89 66.3
SGA_v2.0_scaffold63G21639 Striga asiatica HOM05D006796 ORTHO05D008615 3.3e-20 101.7 95 60.0
Oeu055099.3 Olea europaea HOM05D006796 ORTHO05D008615 5.6e-20 100.9 103 56.3
HanXRQChr12g0379181 Helianthus annuus HOM05D006796 ORTHO05D008615 7.4e-20 100.5 96 59.4
MD16G1067400 Malus domestica HOM05D006796 ORTHO05D008615 7.4e-20 100.5 96 58.3
ATR0564G337 Amborella trichopoda HOM05D006796 ORTHO05D008615 9.6e-20 100.1 96 57.3
BcaC05g25295 Brassica carinata HOM05D006796 ORTHO05D008615 9.6e-20 100.1 96 58.3
C05p11750 Brassica napus HOM05D006796 ORTHO05D008615 9.6e-20 100.1 96 58.3
BolC5t29921H Brassica oleracea HOM05D006796 ORTHO05D008615 9.6e-20 100.1 96 58.3
ECA234G4054 Erigeron canadensis HOM05D006796 ORTHO05D008615 1.3e-19 99.8 96 59.4
AT1G13990 Arabidopsis thaliana HOM05D006796 ORTHO05D008615 2.1e-19 99.0 96 57.3
AUR62005838 Chenopodium quinoa HOM05D006796 ORTHO05D008615 2.8e-19 98.6 96 56.2
Carub.0001s1368 Capsella rubella HOM05D006796 ORTHO05D008615 3.7e-19 98.2 96 58.3
CARHR014360 Cardamine hirsuta HOM05D006796 ORTHO05D008615 6.2e-19 97.4 96 57.3
AUR62032832 Chenopodium quinoa HOM05D006796 ORTHO05D008615 6.2e-19 97.4 96 55.2
AL1G25830 Arabidopsis lyrata HOM05D006796 ORTHO05D008615 1.1e-18 96.7 96 56.2
BraA06t24185Z Brassica rapa HOM05D006796 ORTHO05D008615 1.1e-18 96.7 96 56.2
THA.LOC104805179 Tarenaya hassleriana HOM05D006796 ORTHO05D008615 1.1e-18 96.7 96 56.2
Aa31LG1G1040 Aethionema arabicum HOM05D006796 ORTHO05D008615 1.8e-18 95.9 96 55.2
Os03g0168200 Oryza sativa ssp. japonica HOM05D006796 ORTHO05D008615 6.9e-18 94.0 96 54.2
Zm00001eb402440 Zea mays HOM05D006796 ORTHO05D008615 9.0e-18 93.6 96 56.2
Lsat_1_v5_gn_4_10660 Lactuca sativa HOM05D006796 ORTHO05D008615 5.8e-17 90.9 89 60.7
A06p09990 Brassica napus HOM05D006796 ORTHO05D008615 1.0e-16 90.1 73 63.0
Potri.008G090900 Populus trichocarpa HOM05D006796 ORTHO05D008615 3.2e-15 85.1 71 62.0
HPP92_016903 Vanilla planifolia HOM05D006796 ORTHO05D008615 3.2e-15 85.1 75 53.3
vmacro01347 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 2.7e-14 82.0 96 50.0
Mapoly0042s0065 Marchantia polymorpha HOM05D006796 ORTHO05D008615 2.3e-13 79.0 95 48.4
Nn2g11199 Nelumbo nucifera HOM05D006796 ORTHO05D008615 8.2e-11 70.5 50 74.0
Medtr5g042520 Medicago truncatula HOM05D006796 ORTHO05D008615 1.1e-10 70.1 69 58.0
unitig_8.g3954 Utricularia gibba HOM05D006796 ORTHO05D008615 2.6e-09 65.5 96 41.7
SMO271G0176 Selaginella moellendorffii HOM05D006796 ORTHO05D008615 2.9e-08 62.0 66 53.0
CBR_g41640 Chara braunii HOM05D006796 ORTHO05D008615 5.0e-08 61.2 103 39.8


User provided reference genes

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