Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g13907 Nelumbo nucifera HOM05D007539 ORTHO05D009315 2.7e-126 455.3 225 100.0
Dinv37358 Davidia involucrata HOM05D007539 ORTHO05D009315 1.4e-82 310.1 224 70.1
Manes.08G015800 Manihot esculenta HOM05D007539 ORTHO05D009315 4.1e-82 308.5 190 77.9
Lj2A124T70 Lonicera japonica HOM05D007539 ORTHO05D009315 9.2e-82 307.4 200 76.0
TWI74G0011 Tripterygium wilfordii HOM05D007539 ORTHO05D009315 1.6e-81 306.6 197 76.1
MBI11_g41953_MAGBIO Magnolia biondii HOM05D007539 ORTHO05D009315 1.0e-80 303.9 190 76.3
Cfa016483 Carpinus fangiana HOM05D007539 ORTHO05D009315 3.0e-80 302.4 178 82.0
COL.COLO4_22255 Corchorus olitorius HOM05D007539 ORTHO05D009315 1.5e-79 300.1 224 68.8
QL07p041368 Quercus lobata HOM05D007539 ORTHO05D009315 3.3e-79 298.9 214 72.4
Thecc.05G075600 Theobroma cacao HOM05D007539 ORTHO05D009315 4.3e-79 298.5 168 83.9
PGR142G1614 Punica granatum HOM05D007539 ORTHO05D009315 7.3e-79 297.7 197 74.1
TAR633G2614 Trochodendron aralioides HOM05D006793 ORTHO05D009315 1.2e-78 297.0 197 79.2
Aqoxy4G02594 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 1.6e-78 296.6 178 80.9
Cc06_g04790 Coffea canephora HOM05D007539 ORTHO05D009315 2.1e-78 296.2 170 82.9
Duzib093G0735 Durio zibethinus HOM05D007539 ORTHO05D009315 2.1e-78 296.2 169 82.8
Potri.016G096900 Populus trichocarpa HOM05D007539 ORTHO05D009315 2.1e-78 296.2 180 81.1
Sopen10g035220 Solanum pennellii HOM05D007539 ORTHO05D009315 2.8e-78 295.8 192 76.0
Ciclev10009520m.g Citrus clementina HOM05D007539 ORTHO05D009315 3.6e-78 295.4 192 75.0
Peaxi162Scf00146g00014 Petunia axillaris HOM05D007539 ORTHO05D009315 3.6e-78 295.4 186 76.9
PGSC0003DMG400008599 Solanum tuberosum HOM05D007539 ORTHO05D009315 3.6e-78 295.4 192 75.5
Nitab4.5_0009839g0010 Nicotiana tabacum HOM05D007539 ORTHO05D009315 4.7e-78 295.0 187 77.5
TPR.G9909 Trifolium pratense HOM05D007539 ORTHO05D009315 8.1e-78 294.3 189 74.1
Gorai.009G410900 Gossypium raimondii HOM05D007539 ORTHO05D009315 1.1e-77 293.9 170 83.5
Gohir.A04G068300 Gossypium hirsutum HOM05D007539 ORTHO05D009315 4.0e-77 292.0 170 83.5
Eucgr.K02419 Eucalyptus grandis HOM05D007539 ORTHO05D009315 6.8e-77 291.2 250 62.8
Ah.08g211220 Amaranthus hybridus HOM05D007539 ORTHO05D009315 8.9e-77 290.8 187 75.9
EL10Ac7g16719 Beta vulgaris HOM05D007539 ORTHO05D009315 8.9e-77 290.8 223 69.5
GSVIVG01033714001 Vitis vinifera HOM05D007539 ORTHO05D009315 8.9e-77 290.8 175 79.4
Gohir.D04G106800 Gossypium hirsutum HOM05D007539 ORTHO05D009315 1.2e-76 290.4 170 83.5
Psat6g077160 Pisum sativum HOM05D007539 ORTHO05D009315 1.2e-76 290.4 190 74.7
Solyc10g085820.2 Solanum lycopersicum HOM05D007539 ORTHO05D009315 1.2e-76 290.4 192 74.5
VMungo0720G2140 Vigna mungo HOM05D007539 ORTHO05D009315 1.2e-76 290.4 189 75.7
Aqoxy2G01556 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 2.6e-76 289.3 162 84.6
Ca_11568_v3 Cicer arietinum L. HOM05D007539 ORTHO05D009315 2.6e-76 289.3 187 73.8
Lj5g0010413 Lotus japonicus HOM05D007539 ORTHO05D009315 2.6e-76 289.3 171 79.5
Eucgr.K02422 Eucalyptus grandis HOM05D007539 ORTHO05D009315 3.4e-76 288.9 170 80.0
Sc20g0005850 Simmondsia chinensis HOM05D007539 ORTHO05D009315 3.4e-76 288.9 190 75.3
Actinidia39861 Actinidia chinensis HOM05D007539 ORTHO05D009315 5.8e-76 288.1 166 82.5
Cpa.g.sc5.125 Carica papaya HOM05D007539 ORTHO05D009315 2.2e-75 286.2 205 70.2
Phvul.007G226000 Phaseolus vulgaris HOM05D007539 ORTHO05D009315 8.4e-75 284.3 189 73.5
arahy.Tifrunner.gnm1.ann1.6XWD2H Arachis hypogaea HOM05D007539 ORTHO05D009315 1.1e-74 283.9 172 79.1
arahy.Tifrunner.gnm1.ann1.M3KAW1 Arachis hypogaea HOM05D007539 ORTHO05D009315 1.1e-74 283.9 172 79.1
Migut.L01732 Erythranthe guttata HOM05D007539 ORTHO05D009315 1.9e-74 283.1 181 73.5
PSO339G1895 Papaver somniferum HOM05D007539 ORTHO05D009315 2.4e-74 282.7 195 74.4
Glyma.10G063500 Glycine max HOM05D007539 ORTHO05D009315 3.2e-74 282.3 171 78.9
Rhsim03G0085100 Rhododendron simsii HOM05D007539 ORTHO05D009315 3.2e-74 282.3 275 58.5
RcHm_v2.0_Chr3g0471301 Rosa chinensis HOM05D007539 ORTHO05D009315 3.2e-74 282.3 230 66.5
Medtr1g062250 Medicago truncatula HOM05D007539 ORTHO05D009315 4.1e-74 282.0 190 73.2
Prupe.7G122900 Prunus persica HOM05D007539 ORTHO05D009315 4.1e-74 282.0 173 78.6
SalBow5G4705 Salvia bowleyana HOM05D007539 ORTHO05D009315 7.1e-74 281.2 195 69.2
CAN.G729.5 Capsicum annuum HOM05D007539 ORTHO05D009315 9.2e-74 280.8 163 81.6
FvH4_6g17220 Fragaria vesca HOM05D007539 ORTHO05D009315 1.2e-73 280.4 199 70.9
FAN05G2086 Fragaria x ananassa HOM05D007539 ORTHO05D009315 1.2e-73 280.4 200 71.0
CANSAT80G1421 Cannabis sativa HOM05D007539 ORTHO05D009315 1.6e-73 280.0 179 77.7
Sed0004549 Sechium edule HOM05D007539 ORTHO05D009315 1.6e-73 280.0 193 72.5
MELO3C009408.2 Cucumis melo HOM05D007539 ORTHO05D009315 2.7e-73 279.3 170 77.6
MD12G1102800 Malus domestica HOM05D007539 ORTHO05D009315 4.6e-73 278.5 225 64.0
Oeu045245.1 Olea europaea HOM05D007539 ORTHO05D009315 7.8e-73 277.7 170 77.1
BcaB01g05802 Brassica carinata HOM05D007539 ORTHO05D009315 1.0e-72 277.3 220 64.1
HanXRQChr08g0218701 Helianthus annuus HOM05D007539 ORTHO05D009315 1.3e-72 276.9 167 78.4
MSTRG.10338 Avicennia marina HOM05D007539 ORTHO05D009315 1.7e-72 276.6 177 74.0
CDE02G3922 Ceratophyllum demersum HOM05D007539 ORTHO05D009315 1.7e-72 276.6 197 72.1
AUR62042699 Chenopodium quinoa HOM05D007539 ORTHO05D009315 1.7e-72 276.6 226 64.2
FAN14G0473 Fragaria x ananassa HOM05D007539 ORTHO05D009315 6.6e-72 274.6 199 69.8
Os08g0560600 Oryza sativa ssp. japonica HOM05D007539 ORTHO05D009315 8.6e-72 274.2 187 71.1
Sabra16G0100100 Salix brachista HOM05D007539 ORTHO05D009315 7.3e-71 271.2 203 68.5
Zm00001eb175880 Zea mays HOM05D007539 ORTHO05D009315 1.6e-70 270.0 204 64.2
FAN05G5748 Fragaria x ananassa HOM05D007539 ORTHO05D009315 2.1e-70 269.6 166 78.3
CARHR209760 Cardamine hirsuta HOM05D007539 ORTHO05D009315 3.6e-70 268.9 176 72.2
FAN02G2576 Fragaria x ananassa HOM05D007539 ORTHO05D009315 6.2e-70 268.1 199 69.3
ATR0950G005 Amborella trichopoda HOM05D007539 ORTHO05D009315 8.1e-70 267.7 190 69.5
HPP92_014788 Vanilla planifolia HOM05D007539 ORTHO05D009315 4.0e-69 265.4 168 73.8
Thhalv10014552m.g Eutrema salsugineum HOM05D007539 ORTHO05D009315 1.2e-68 263.8 176 71.6
CiPaw.09G005200 Carya illinoinensis HOM05D007539 ORTHO05D009315 1.5e-68 263.5 179 74.9
unitig_8.g4721 Utricularia gibba HOM05D007539 ORTHO05D009315 7.6e-68 261.2 188 69.7
CsaV3_3G036460 Cucumis sativus L. HOM05D007539 ORTHO05D009315 1.3e-67 260.4 193 68.9
ECA238G4618 Erigeron canadensis HOM05D007539 ORTHO05D009315 2.2e-67 259.6 164 76.8
A03p01240 Brassica napus HOM05D007539 ORTHO05D009315 8.4e-67 257.7 183 68.9
SGA_v2.0_scaffold224G42914 Striga asiatica HOM05D007539 ORTHO05D009315 8.4e-67 257.7 173 70.5
Nitab4.5_0000725g0080 Nicotiana tabacum HOM05D007539 ORTHO05D009315 5.1e-64 248.4 223 59.6
Ah.12g063350 Amaranthus hybridus HOM05D007539 ORTHO05D009315 1.9e-63 246.5 137 83.2
vmacro07349 Vaccinium macrocarpon HOM05D007539 ORTHO05D009315 2.5e-63 246.1 140 82.9
Lalb_Chr02g0155351 Lupinus albus HOM05D007539 ORTHO05D009315 9.6e-63 244.2 166 69.3
Glyma.13G148000 Glycine max HOM05D007539 ORTHO05D009315 1.5e-60 236.9 142 78.2
ClCG10G019640 Citrullus lanatus HOM05D007539 ORTHO05D009315 3.4e-60 235.7 172 68.6
BolC3t12712H Brassica oleracea HOM05D007539 ORTHO05D009315 2.2e-59 233.0 293 46.4
C03p01600 Brassica napus HOM05D007539 ORTHO05D009315 2.3e-56 223.0 192 60.4
BcaB01g05814 Brassica carinata HOM05D007539 ORTHO05D009315 1.1e-55 220.7 197 58.9
Aa31LG1G21630 Aethionema arabicum HOM05D007539 ORTHO05D009315 7.4e-55 218.0 146 69.9
Lsat_1_v5_gn_2_18420 Lactuca sativa HOM05D007539 ORTHO05D009315 1.8e-48 196.8 120 75.8
AUR62040192 Chenopodium quinoa HOM05D007539 ORTHO05D009315 5.1e-48 195.3 121 75.2
AL6G13050 Arabidopsis lyrata HOM05D007539 ORTHO05D009315 3.7e-46 189.1 121 71.1
Carub.0006s0239 Capsella rubella HOM05D007539 ORTHO05D009315 6.2e-46 188.3 121 71.1
BraA03t09504Z Brassica rapa HOM05D007539 ORTHO05D009315 5.5e-42 175.3 218 45.4
AagrBONN_evm.TU.Sc2ySwM_117.3355 Anthoceros agrestis HOM05D007539 ORTHO05D009315 3.3e-39 166.0 164 48.2
Mapoly0014s0214 Marchantia polymorpha HOM05D007539 ORTHO05D009315 6.3e-38 161.8 184 47.8
FAN09G1910 Fragaria x ananassa HOM05D007539 ORTHO05D009315 4.6e-33 145.6 77 89.6
QL07p041388 Quercus lobata HOM05D007539 ORTHO05D009315 4.1e-29 132.5 74 79.7
CBR_g37238 Chara braunii HOM05D007539 ORTHO05D009315 6.9e-21 105.1 237 28.7
FAN13G0623 Fragaria x ananassa HOM05D002804 ORTHO05D003755 4.1e-13 79.3 118 49.2
CSS0032451 Camellia sinensis var. sinensis HOM05D021154 ORTHO05D009315 3.0e-08 63.2 83 48.2
CSS0027054 Camellia sinensis var. sinensis HOM05D021154 ORTHO05D009315 4.0e-08 62.8 65 58.5
THA.LOC104826924 Tarenaya hassleriana HOM05D002804 ORTHO05D003755 2.6e-07 60.1 50 64.0
CSS0044668 Camellia sinensis var. sinensis HOM05D021154 ORTHO05D009315 9.7e-07 58.2 66 54.5
AL6G13060 Arabidopsis lyrata HOM05D002804 ORTHO05D003755 4.8e-06 55.8 55 58.2


User provided reference genes

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