Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g13890 Nelumbo nucifera HOM05D005722 ORTHO05D007934 0.0e+00 1118.6 563 100.0
TAR623G1222 Trochodendron aralioides HOM05D005722 ORTHO05D007934 1.3e-257 892.9 569 80.1
Aqoxy1G01041 Aquilegia oxysepala HOM05D005722 ORTHO05D007934 8.6e-246 853.6 565 76.8
PSO339G6299 Papaver somniferum HOM05D005722 ORTHO05D007934 2.5e-237 825.5 571 73.6
PSO063G5110 Papaver somniferum HOM05D005722 ORTHO05D007934 3.3e-237 825.1 571 73.2
CSS0018899 Camellia sinensis var. sinensis HOM05D005722 ORTHO05D007934 1.2e-236 823.2 571 73.7
Gohir.A09G143300 Gossypium hirsutum HOM05D005722 ORTHO05D007934 3.6e-236 821.6 571 72.7
Potri.006G119500 Populus trichocarpa HOM05D005722 ORTHO05D007934 1.1e-235 820.1 575 74.1
Prupe.7G123300 Prunus persica HOM05D005722 ORTHO05D007934 1.4e-235 819.7 574 72.5
Hma1.2p1_0547F.1_g176330 Hydrangea macrophylla HOM05D005722 ORTHO05D007934 3.4e-234 815.1 536 76.5
Duzib128G0866 Durio zibethinus HOM05D005722 ORTHO05D007934 9.9e-234 813.5 571 73.9
FAN05G4610 Fragaria x ananassa HOM05D005722 ORTHO05D007934 3.8e-233 811.6 566 71.0
RcHm_v2.0_Chr3g0471261 Rosa chinensis HOM05D005722 ORTHO05D007934 4.9e-233 811.2 567 70.7
FAN05G1451 Fragaria x ananassa HOM05D005722 ORTHO05D007934 6.4e-233 810.8 566 71.0
MSTRG.19206 Avicennia marina HOM05D005722 ORTHO05D007934 1.4e-232 809.7 561 73.4
Cfa016476 Carpinus fangiana HOM05D005722 ORTHO05D007934 4.2e-232 808.1 566 73.9
Sabra06G0094100 Salix brachista HOM05D005722 ORTHO05D007934 2.1e-231 805.8 507 78.3
COL.COLO4_22250 Corchorus olitorius HOM05D005722 ORTHO05D007934 1.7e-230 802.7 493 80.1
QL07p041452 Quercus lobata HOM05D005722 ORTHO05D007934 2.3e-230 802.4 569 71.5
Atru.chr8.1708 Acer truncatum HOM05D005722 ORTHO05D007934 3.0e-230 802.0 569 72.1
Gorai.006G160000 Gossypium raimondii HOM05D005722 ORTHO05D007934 3.0e-230 802.0 574 71.6
CANSAT56G0690 Cannabis sativa HOM05D005722 ORTHO05D007934 2.5e-229 798.9 550 73.6
CiPaw.09G004900 Carya illinoinensis HOM05D005722 ORTHO05D007934 2.5e-229 798.9 506 79.2
MD12G1103200 Malus domestica HOM05D005722 ORTHO05D007934 4.3e-229 798.1 516 77.1
FvH4_6g17170 Fragaria vesca HOM05D005722 ORTHO05D007934 7.3e-229 797.3 497 78.1
Rhsim03G0086400 Rhododendron simsii HOM05D005722 ORTHO05D007934 9.6e-229 797.0 565 72.0
CSS0022139 Camellia sinensis var. sinensis HOM05D005722 ORTHO05D007934 6.2e-228 794.3 496 78.6
Ah.08g211270 Amaranthus hybridus HOM05D005722 ORTHO05D007934 1.1e-227 793.5 566 71.0
Thecc.05G075200 Theobroma cacao HOM05D005722 ORTHO05D007934 1.4e-227 793.1 546 74.0
Cc06_g04740 Coffea canephora HOM05D005722 ORTHO05D007934 1.8e-227 792.7 580 69.8
MBI18_g39612_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 5.3e-227 791.2 565 72.7
Migut.J00472 Erythranthe guttata HOM05D005722 ORTHO05D007934 1.5e-226 789.6 487 79.3
AUR62026979 Chenopodium quinoa HOM05D005722 ORTHO05D007934 2.6e-226 788.9 557 70.7
TPR.G31667 Trifolium pratense HOM05D005722 ORTHO05D007934 7.6e-226 787.3 558 72.6
TWI74G0410 Tripterygium wilfordii HOM05D005722 ORTHO05D007934 7.6e-226 787.3 565 70.1
vmacro23004 Vaccinium macrocarpon HOM05D005722 ORTHO05D007934 3.8e-225 785.0 507 77.7
Lj1g0006800 Lotus japonicus HOM05D005722 ORTHO05D007934 2.4e-224 782.3 567 71.1
Cpa.g.sc5.129 Carica papaya HOM05D005722 ORTHO05D007934 3.2e-224 781.9 492 77.0
Manes.09G048478 Manihot esculenta HOM05D005722 ORTHO05D007934 3.2e-224 781.9 567 70.4
Lalb_Chr02g0155431 Lupinus albus HOM05D005722 ORTHO05D007934 1.2e-223 780.0 517 75.8
AUR62042706 Chenopodium quinoa HOM05D005722 ORTHO05D007934 2.1e-223 779.2 510 75.1
Peaxi162Scf00138g00041 Petunia axillaris HOM05D005722 ORTHO05D007934 6.0e-223 777.7 500 76.8
CAN.G1038.3 Capsicum annuum HOM05D005722 ORTHO05D007934 1.1e-221 773.5 571 68.8
EL10Ac7g16706 Beta vulgaris HOM05D005722 ORTHO05D007934 1.5e-221 773.1 497 77.5
Psat3g038760 Pisum sativum HOM05D005722 ORTHO05D007934 2.5e-221 772.3 548 71.2
Phvul.007G226300 Phaseolus vulgaris HOM05D005722 ORTHO05D007934 2.8e-220 768.8 566 69.4
Ciclev10011424m.g Citrus clementina HOM05D005722 ORTHO05D007934 8.1e-220 767.3 515 75.1
Glyma.13G147700 Glycine max HOM05D005722 ORTHO05D007934 1.8e-219 766.1 578 67.8
Glyma.10G063100 Glycine max HOM05D005722 ORTHO05D007934 2.4e-219 765.8 572 68.5
Lj5g0013810 Lotus japonicus HOM05D005722 ORTHO05D007934 2.4e-219 765.8 564 68.8
Medtr7g102810 Medicago truncatula HOM05D005722 ORTHO05D007934 2.4e-219 765.8 486 77.6
PGSC0003DMG400003879 Solanum tuberosum HOM05D005722 ORTHO05D007934 2.4e-219 765.8 493 76.3
Lalb_Chr25g0288811 Lupinus albus HOM05D005722 ORTHO05D007934 4.0e-219 765.0 487 78.2
ECA238G3369 Erigeron canadensis HOM05D005722 ORTHO05D007934 6.9e-219 764.2 569 68.9
DCAR_015016 Daucus carota HOM05D005722 ORTHO05D007934 1.2e-218 763.5 486 77.8
PGR004G2571 Punica granatum HOM05D005722 ORTHO05D007934 1.5e-218 763.1 589 67.9
VMungo0720G2103 Vigna mungo HOM05D005722 ORTHO05D007934 5.8e-218 761.1 489 75.9
Medtr1g062130 Medicago truncatula HOM05D005722 ORTHO05D007934 7.6e-218 760.8 569 69.4
Nitab4.5_0004731g0050 Nicotiana tabacum HOM05D005722 ORTHO05D007934 9.9e-218 760.4 500 75.4
Ca_04564_v3 Cicer arietinum L. HOM05D005722 ORTHO05D007934 1.3e-217 760.0 511 75.0
Sopen09g003380 Solanum pennellii HOM05D005722 ORTHO05D007934 2.2e-217 759.2 490 75.5
Carub.0006s0238 Capsella rubella HOM05D005722 ORTHO05D007934 1.1e-216 756.9 589 66.0
THA.LOC104816667 Tarenaya hassleriana HOM05D005722 ORTHO05D007934 7.1e-216 754.2 476 77.3
arahy.Tifrunner.gnm1.ann1.D7QF3J Arachis hypogaea HOM05D005722 ORTHO05D007934 3.5e-215 751.9 518 72.6
arahy.Tifrunner.gnm1.ann1.P0W3IN Arachis hypogaea HOM05D005722 ORTHO05D007934 3.5e-215 751.9 518 72.6
Haze_19473 Corylus avellana HOM05D005722 ORTHO05D007934 3.5e-215 751.9 445 83.1
TPR.G22453 Trifolium pratense HOM05D005722 ORTHO05D007934 3.5e-215 751.9 490 75.9
Lsat_1_v5_gn_2_20401 Lactuca sativa HOM05D005722 ORTHO05D007934 1.0e-214 750.4 568 67.3
Gorai.006G160100 Gossypium raimondii HOM05D005722 ORTHO05D007934 2.3e-214 749.2 551 68.8
Gohir.D09G139600 Gossypium hirsutum HOM05D005722 ORTHO05D007934 5.1e-214 748.0 549 68.5
Sc20g0005780 Simmondsia chinensis HOM05D005722 ORTHO05D007934 5.1e-214 748.0 501 75.0
CARHR209770 Cardamine hirsuta HOM05D005722 ORTHO05D007934 1.1e-213 746.9 586 65.2
C03p01590 Brassica napus HOM05D005722 ORTHO05D007934 1.9e-213 746.1 491 73.9
Psat6g077240 Pisum sativum HOM05D005722 ORTHO05D007934 3.3e-213 745.3 540 69.6
A03p01230 Brassica napus HOM05D005722 ORTHO05D007934 4.3e-213 745.0 491 73.9
BolC3t12711H Brassica oleracea HOM05D005722 ORTHO05D007934 1.6e-212 743.0 491 73.7
BraA03t09503Z Brassica rapa HOM05D005722 ORTHO05D007934 4.8e-212 741.5 491 73.5
HanXRQChr14g0432851 Helianthus annuus HOM05D005722 ORTHO05D007934 4.8e-212 741.5 479 75.6
Thhalv10015725m.g Eutrema salsugineum HOM05D005722 ORTHO05D007934 6.2e-212 741.1 490 74.1
SGA_v2.0_scaffold75G24819 Striga asiatica HOM05D005722 ORTHO05D007934 6.2e-212 741.1 541 70.6
Sp6g39190 Schrenkiella parvula HOM05D005722 ORTHO05D007934 8.2e-212 740.7 506 72.1
SalBow3G1081 Salvia bowleyana HOM05D005722 ORTHO05D007934 1.1e-211 740.3 489 74.6
Gohir.D09G139500 Gossypium hirsutum HOM05D005722 ORTHO05D007934 2.4e-211 739.2 515 73.4
SalBow3G1392 Salvia bowleyana HOM05D005722 ORTHO05D007934 2.4e-211 739.2 489 74.4
Gohir.A09G143500 Gossypium hirsutum HOM05D005722 ORTHO05D007934 4.0e-211 738.4 554 67.7
Aa31LG1G21640 Aethionema arabicum HOM05D005722 ORTHO05D007934 1.2e-210 736.9 570 65.6
Solyc09g008550.4 Solanum lycopersicum HOM05D005722 ORTHO05D007934 3.4e-210 735.3 462 76.8
AT5G03555 Arabidopsis thaliana HOM05D005722 ORTHO05D007934 5.8e-210 734.6 493 72.4
unitig_578.g15784 Utricularia gibba HOM05D005722 ORTHO05D007934 1.7e-209 733.0 566 65.2
AL6G13040 Arabidopsis lyrata HOM05D005722 ORTHO05D007934 2.9e-209 732.3 476 73.9
ClCG10G019670 Citrullus lanatus HOM05D005722 ORTHO05D007934 7.1e-208 727.6 558 66.8
ATR0009G019 Amborella trichopoda HOM05D005722 ORTHO05D007934 6.0e-207 724.5 477 74.8
MELO3C009405.2 Cucumis melo HOM05D005722 ORTHO05D007934 5.7e-205 718.0 569 65.9
FAN02G1363 Fragaria x ananassa HOM05D005722 ORTHO05D007934 5.9e-202 708.0 455 76.7
Sed0005717 Sechium edule HOM05D005722 ORTHO05D007934 8.5e-201 704.1 547 65.8
FAN14G5091 Fragaria x ananassa HOM05D005722 ORTHO05D007934 3.2e-200 702.2 438 78.1
CsaV3_3G036500 Cucumis sativus L. HOM05D005722 ORTHO05D007934 2.7e-199 699.1 551 64.4
MBI18_g19054_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 2.5e-197 692.6 485 70.5
MBI18_g39457_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 5.7e-197 691.4 484 70.9
MBI18_g31623_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 2.2e-196 689.5 484 70.7
Nitab4.5_0003906g0050 Nicotiana tabacum HOM05D005722 ORTHO05D007934 3.4e-194 682.2 500 70.2
Ca_30109_v3 Cicer arietinum L. HOM05D005722 ORTHO05D007934 5.9e-194 681.4 409 80.4
GSVIVG01033705001 Vitis vinifera HOM05D005722 ORTHO05D007934 1.3e-188 663.7 569 63.3
SEGI_35570 Sequoiadendron giganteum HOM05D005722 ORTHO05D007934 3.7e-188 662.1 483 65.6
Dinv35829 Davidia involucrata HOM05D005722 ORTHO05D007934 3.1e-187 659.1 478 70.9
Eucgr.A01597 Eucalyptus grandis HOM05D005722 ORTHO05D007934 1.0e-185 654.1 572 60.8
HPP92_025568 Vanilla planifolia HOM05D005722 ORTHO05D007934 8.0e-183 644.4 489 66.1
Os02g0666700 Oryza sativa ssp. japonica HOM05D005722 ORTHO05D007934 1.8e-182 643.3 467 65.1
Cfa016468 Carpinus fangiana HOM05D005722 ORTHO05D007934 1.5e-181 640.2 444 73.4
Zm00001eb249990 Zea mays HOM05D005722 ORTHO05D007934 2.0e-178 629.8 551 57.2
CDE08G1312 Ceratophyllum demersum HOM05D005722 ORTHO05D007934 1.1e-176 624.0 485 66.4
Cc06_g04750 Coffea canephora HOM05D005722 ORTHO05D007934 4.1e-171 605.5 495 62.2
Mapoly0002s0120 Marchantia polymorpha HOM05D005722 ORTHO05D007934 7.2e-168 594.7 473 59.4
Pp3c14_20990 Physcomitrium patens HOM05D005722 ORTHO05D007934 2.0e-162 576.6 476 58.8
Pp3c1_30640 Physcomitrium patens HOM05D005722 ORTHO05D007934 1.3e-161 573.9 477 58.3
SMO115G0026 Selaginella moellendorffii HOM05D005722 ORTHO05D007934 4.4e-157 558.9 478 58.8
Actinidia26637 Actinidia chinensis HOM05D005722 ORTHO05D007934 2.3e-150 536.6 435 66.9
Cre09.g389356 Chlamydomonas reinhardtii HOM05D005722 ORTHO05D007934 5.0e-145 518.8 475 52.8
Actinidia28931 Actinidia chinensis HOM05D005722 ORTHO05D007934 1.9e-144 516.9 372 71.0
Lj2P123T37 Lonicera japonica HOM05D005722 ORTHO05D007934 1.1e-134 484.6 319 77.4
Sc20g0005800 Simmondsia chinensis HOM05D005722 ORTHO05D007934 1.7e-132 477.2 331 73.4
MCO11G702 Micromonas commoda HOM05D005722 ORTHO05D007934 6.4e-132 475.3 514 48.8
PRCOL_00006021 Prasinoderma coloniale HOM05D005722 ORTHO05D007934 7.6e-125 451.8 511 47.0
Haze_19472 Corylus avellana HOM05D005722 ORTHO05D007934 1.4e-73 281.6 163 79.1
Cfa025019 Carpinus fangiana HOM05D005722 ORTHO05D123305 6.5e-60 236.1 480 30.6
Haze_02843 Corylus avellana HOM05D005722 ORTHO05D029153 4.1e-54 216.9 135 77.8
Sc20g0005790 Simmondsia chinensis HOM05D005722 ORTHO05D029153 6.8e-41 172.9 110 76.4
Pp3s34_270 Physcomitrium patens HOM05D005722 ORTHO05D317165 7.0e-38 162.9 426 26.5
TPR.G39511 Trifolium pratense HOM05D005722 ORTHO05D029153 1.0e-28 132.5 72 83.3
Lsat_1_v5_gn_4_152401 Lactuca sativa HOM05D005722 ORTHO05D007934 4.0e-25 120.6 80 80.0
MCO11G808 Micromonas commoda HOM05D005722 ORTHO05D268580 9.5e-19 99.4 425 24.2
MCO10G252 Micromonas commoda HOM05D005722 ORTHO05D270642 2.8e-18 97.8 532 27.4
FAN14G5603 Fragaria x ananassa HOM05D005722 ORTHO05D029153 6.8e-17 93.2 58 74.1
Cfa016469 Carpinus fangiana HOM05D005722 ORTHO05D125356 1.9e-06 58.5 28 92.9


User provided reference genes

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