Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g13828 Nelumbo nucifera HOM05D005647 ORTHO05D006968 1.3e-111 406.4 208 100.0
TAR623G0344 Trochodendron aralioides HOM05D005647 ORTHO05D006968 1.3e-90 336.7 205 80.5
MBI14_g34527_MAGBIO Magnolia biondii HOM05D005647 ORTHO05D006968 5.9e-83 311.2 205 75.6
PSO447G0260 Papaver somniferum HOM05D005647 ORTHO05D006968 2.1e-80 302.8 205 73.7
Nitab4.5_0000022g0330 Nicotiana tabacum HOM05D005647 ORTHO05D006968 1.0e-79 300.4 205 71.7
Nitab4.5_0008854g0020 Nicotiana tabacum HOM05D005647 ORTHO05D006968 5.2e-79 298.1 205 70.7
CiPaw.13G102300 Carya illinoinensis HOM05D005647 ORTHO05D006968 8.8e-79 297.4 205 71.2
PSO541G4932 Papaver somniferum HOM05D005647 ORTHO05D006968 2.0e-78 296.2 205 74.1
Rhsim01G0223800 Rhododendron simsii HOM05D005647 ORTHO05D006968 4.4e-78 295.0 205 71.7
Lj1A178T39 Lonicera japonica HOM05D005647 ORTHO05D006968 7.5e-78 294.3 205 69.3
Hund18946 Selenicereus undatus HOM05D005647 ORTHO05D006968 3.7e-77 292.0 205 68.3
Sopen06g001190 Solanum pennellii HOM05D005647 ORTHO05D006968 4.8e-77 291.6 205 70.2
Solyc06g005200.3 Solanum lycopersicum HOM05D005647 ORTHO05D006968 6.3e-77 291.2 205 70.2
GSVIVG01025064001 Vitis vinifera HOM05D005647 ORTHO05D006968 2.4e-76 289.3 205 72.2
vmacro14498 Vaccinium macrocarpon HOM05D005647 ORTHO05D006968 3.1e-76 288.9 203 70.9
EL10Ac7g15937 Beta vulgaris HOM05D005647 ORTHO05D006968 4.1e-76 288.5 205 68.8
Cfa011418 Carpinus fangiana HOM05D005647 ORTHO05D006968 5.3e-76 288.1 205 69.3
COL.COLO4_18417 Corchorus olitorius HOM05D005647 ORTHO05D006968 7.0e-76 287.7 205 68.8
PSO675G6613 Papaver somniferum HOM05D005647 ORTHO05D006968 7.0e-76 287.7 205 72.7
Ah.15g096320 Amaranthus hybridus HOM05D005647 ORTHO05D006968 1.2e-75 287.0 205 68.8
PGSC0003DMG400033668 Solanum tuberosum HOM05D005647 ORTHO05D006968 2.0e-75 286.2 205 68.8
Duzib150G0770 Durio zibethinus HOM05D005647 ORTHO05D006968 2.7e-75 285.8 205 68.8
Actinidia00810 Actinidia chinensis HOM05D005647 ORTHO05D006968 4.5e-75 285.0 205 70.2
Ciclev10027867m.g Citrus clementina HOM05D005647 ORTHO05D006968 5.9e-75 284.6 205 67.8
Gohir.D05G099100 Gossypium hirsutum HOM05D005647 ORTHO05D006968 5.9e-75 284.6 205 68.3
Gorai.009G103000 Gossypium raimondii HOM05D005647 ORTHO05D006968 5.9e-75 284.6 205 68.3
Cc01_g12040 Coffea canephora HOM05D005647 ORTHO05D006968 7.7e-75 284.3 205 67.8
Thecc.09G331200 Theobroma cacao HOM05D005647 ORTHO05D006968 1.0e-74 283.9 205 67.8
Gohir.A05G099200 Gossypium hirsutum HOM05D005647 ORTHO05D006968 1.3e-74 283.5 205 68.3
DCAR_005295 Daucus carota HOM05D005647 ORTHO05D006968 8.5e-74 280.8 206 69.4
CDE08G0081 Ceratophyllum demersum HOM05D005647 ORTHO05D006968 1.5e-73 280.0 203 68.0
Manes.04G028600 Manihot esculenta HOM05D005647 ORTHO05D006968 1.9e-73 279.6 205 67.8
Lsat_1_v5_gn_5_167021 Lactuca sativa HOM05D005647 ORTHO05D006968 4.2e-73 278.5 205 68.3
ATR0787G117 Amborella trichopoda HOM05D005647 ORTHO05D006968 1.2e-72 276.9 207 64.7
CANSAT54G2414 Cannabis sativa HOM05D005647 ORTHO05D006968 2.7e-72 275.8 205 67.8
Sc14g0000850 Simmondsia chinensis HOM05D005647 ORTHO05D006968 3.6e-72 275.4 206 66.5
CDE02G4018 Ceratophyllum demersum HOM05D005647 ORTHO05D006968 6.1e-72 274.6 203 67.0
Aqoxy4G03104_Aqoxy4G03103 Aquilegia oxysepala HOM05D005647 ORTHO05D006968 1.0e-71 273.9 204 69.1
AUR62001855 Chenopodium quinoa HOM05D005647 ORTHO05D006968 1.0e-71 273.9 205 66.3
Potri.009G025800 Populus trichocarpa HOM05D005647 ORTHO05D006968 1.0e-71 273.9 204 68.1
QL03p069904 Quercus lobata HOM05D005647 ORTHO05D006968 1.8e-71 273.1 205 66.8
Cpa.g.sc139.4 Carica papaya HOM05D005647 ORTHO05D006968 5.7e-70 268.1 205 64.9
MSTRG.21166 Avicennia marina HOM05D005647 ORTHO05D006968 7.5e-70 267.7 206 64.6
TWI75G1819 Tripterygium wilfordii HOM05D005647 ORTHO05D006968 1.7e-69 266.5 205 64.4
Aqoxy4G03106 Aquilegia oxysepala HOM05D005647 ORTHO05D006968 2.8e-69 265.8 207 63.3
MD11G1117900 Malus domestica HOM05D005647 ORTHO05D006968 2.4e-68 262.7 205 63.4
Atru.chr3.3782 Acer truncatum HOM05D005647 ORTHO05D006968 3.1e-68 262.3 237 57.0
Lj3g0017565 Lotus japonicus HOM05D005647 ORTHO05D006968 3.1e-68 262.3 205 62.9
FAN11G0841 Fragaria x ananassa HOM05D005647 ORTHO05D006968 1.2e-67 260.4 205 62.4
TPR.G17867 Trifolium pratense HOM05D005647 ORTHO05D006968 1.2e-67 260.4 205 62.0
SGA_v2.0_scaffold61G21232 Striga asiatica HOM05D005647 ORTHO05D006968 1.6e-67 260.0 205 61.0
TPR.G11621 Trifolium pratense HOM05D005647 ORTHO05D006968 2.0e-67 259.6 205 62.0
FvH4_3g34550 Fragaria vesca HOM05D005647 ORTHO05D006968 3.5e-67 258.8 205 62.0
FAN21G3075 Fragaria x ananassa HOM05D005647 ORTHO05D006968 3.5e-67 258.8 205 62.0
Migut.D02155 Erythranthe guttata HOM05D005647 ORTHO05D006968 4.5e-67 258.5 205 61.0
FAN25G1201 Fragaria x ananassa HOM05D005647 ORTHO05D006968 4.5e-67 258.5 205 62.4
RcHm_v2.0_Chr5g0062191 Rosa chinensis HOM05D005647 ORTHO05D006968 5.9e-67 258.1 205 62.4
FAN16G2614 Fragaria x ananassa HOM05D005647 ORTHO05D006968 1.7e-66 256.5 205 61.5
VMungo1127G1784 Vigna mungo HOM05D005647 ORTHO05D006968 1.7e-66 256.5 204 60.8
AL8G36550 Arabidopsis lyrata HOM05D005647 ORTHO05D006968 2.3e-66 256.1 208 62.5
AT5G59980 Arabidopsis thaliana HOM05D005647 ORTHO05D006968 2.9e-66 255.8 208 62.0
PGR119G0370 Punica granatum HOM05D005647 ORTHO05D006968 2.9e-66 255.8 204 63.2
RcHm_v2.0_Chr4g0385531 Rosa chinensis HOM05D005647 ORTHO05D006968 2.9e-66 255.8 205 62.4
Haze_23998 Corylus avellana HOM05D005647 ORTHO05D006968 3.8e-66 255.4 205 64.4
Glyma.13G196800 Glycine max HOM05D005647 ORTHO05D006968 3.8e-66 255.4 205 62.0
Lalb_Chr24g0394311 Lupinus albus HOM05D005647 ORTHO05D006968 3.8e-66 255.4 206 60.7
ECA248G2619 Erigeron canadensis HOM05D005647 ORTHO05D006968 6.6e-66 254.6 205 63.9
Ca_01361_v3 Cicer arietinum L. HOM05D005647 ORTHO05D006968 8.6e-66 254.2 205 62.0
Aa31LG1G12110 Aethionema arabicum HOM05D005647 ORTHO05D006968 1.1e-65 253.8 211 61.6
Aa31LG5G21920 Aethionema arabicum HOM05D005647 ORTHO05D006968 1.5e-65 253.4 206 63.6
CAN.G200.2 Capsicum annuum HOM05D005647 ORTHO05D006968 1.5e-65 253.4 168 72.6
HanXRQChr14g0429211 Helianthus annuus HOM05D005647 ORTHO05D006968 1.9e-65 253.1 207 61.8
Actinidia03769 Actinidia chinensis HOM05D005647 ORTHO05D006968 2.5e-65 252.7 168 74.4
Oeu058515.3 Olea europaea HOM05D005647 ORTHO05D006968 2.5e-65 252.7 242 57.4
unitig_736.g22430 Utricularia gibba HOM05D005647 ORTHO05D006968 2.5e-65 252.7 205 58.0
ClCG02G020580 Citrullus lanatus HOM05D005647 ORTHO05D006968 3.3e-65 252.3 205 60.0
Medtr2g096090 Medicago truncatula HOM05D005647 ORTHO05D006968 7.2e-65 251.1 205 60.0
VMungo1080G1709 Vigna mungo HOM05D005647 ORTHO05D006968 7.2e-65 251.1 205 60.5
Carub.0004s0912 Capsella rubella HOM05D005647 ORTHO05D006968 4.7e-64 248.4 208 61.1
Peaxi162Scf00006g01310 Petunia axillaris HOM05D005647 ORTHO05D006968 8.0e-64 247.7 205 63.9
Psat5g282040 Pisum sativum HOM05D005647 ORTHO05D006968 1.8e-63 246.5 205 58.5
SalBow3G2669 Salvia bowleyana HOM05D005647 ORTHO05D006968 8.9e-63 244.2 202 58.9
Phvul.L002619 Phaseolus vulgaris HOM05D005647 ORTHO05D006968 1.5e-62 243.4 205 57.6
SalBow3G1239 Salvia bowleyana HOM05D005647 ORTHO05D006968 1.5e-62 243.4 202 58.9
BcaB05g22600 Brassica carinata HOM05D005647 ORTHO05D006968 2.0e-62 243.0 208 61.1
A02p06680 Brassica napus HOM05D005647 ORTHO05D006968 2.0e-62 243.0 208 60.6
MELO3C025708.2 Cucumis melo HOM05D005647 ORTHO05D006968 2.6e-62 242.7 201 58.2
C02p11970 Brassica napus HOM05D005647 ORTHO05D006968 3.4e-62 242.3 208 60.6
BraA02t05750Z Brassica rapa HOM05D005647 ORTHO05D006968 3.4e-62 242.3 208 60.6
Sed0021109 Sechium edule HOM05D005647 ORTHO05D006968 4.4e-62 241.9 205 57.6
Thhalv10012856m.g Eutrema salsugineum HOM05D005647 ORTHO05D006968 9.8e-62 240.7 208 59.6
BcaC04g19653 Brassica carinata HOM05D005647 ORTHO05D006968 1.7e-61 240.0 208 59.1
BolC9t58115H Brassica oleracea HOM05D005647 ORTHO05D006968 1.7e-61 240.0 208 59.1
C09p52480 Brassica napus HOM05D005647 ORTHO05D006968 4.9e-61 238.4 208 58.2
BolC2t07297H Brassica oleracea HOM05D005647 ORTHO05D006968 1.1e-60 237.3 208 58.7
BraA10t43800Z Brassica rapa HOM05D005647 ORTHO05D006968 1.1e-60 237.3 208 58.7
THA.LOC104809599 Tarenaya hassleriana HOM05D005647 ORTHO05D006968 1.4e-60 236.9 205 58.0
BcaB08g36205 Brassica carinata HOM05D005647 ORTHO05D006968 1.8e-60 236.5 208 58.7
A10p17190 Brassica napus HOM05D005647 ORTHO05D006968 2.0e-59 233.0 208 58.2
Sp6g21650 Schrenkiella parvula HOM05D005647 ORTHO05D006968 3.5e-59 232.3 208 58.2
Sabra09G0017200 Salix brachista HOM05D005647 ORTHO05D000187 2.3e-58 229.6 204 58.8
arahy.Tifrunner.gnm1.ann1.7X2355 Arachis hypogaea HOM05D005647 ORTHO05D006968 8.0e-56 221.1 207 54.1
THA.LOC104813123 Tarenaya hassleriana HOM05D005647 ORTHO05D006968 2.3e-55 219.5 168 63.7
arahy.Tifrunner.gnm1.ann1.W04KXW Arachis hypogaea HOM05D005647 ORTHO05D006968 4.0e-55 218.8 207 53.6
Eucgr.A02758 Eucalyptus grandis HOM05D005647 ORTHO05D006968 5.8e-54 214.9 205 56.6
Prupe.6G088000 Prunus persica HOM05D005647 ORTHO05D006968 1.7e-53 213.4 155 67.1
arahy.Tifrunner.gnm1.ann1.S4SLQI Arachis hypogaea HOM05D005647 ORTHO05D006968 1.1e-52 210.7 205 50.2
arahy.Tifrunner.gnm1.ann1.ZDAZ4C Arachis hypogaea HOM05D005647 ORTHO05D006968 1.5e-49 200.3 205 48.3
Gorai.013G129300 Gossypium raimondii HOM05D005647 ORTHO05D006968 2.8e-48 196.1 168 60.7
Pp3c23_18130 Physcomitrium patens HOM05D005647 ORTHO05D006968 1.4e-47 193.7 199 47.7
Mapoly0041s0094 Marchantia polymorpha HOM05D005647 ORTHO05D006968 9.8e-46 187.6 197 47.2
Aqoxy4G01384 Aquilegia oxysepala HOM05D005647 ORTHO05D006968 4.0e-39 165.6 113 69.0
SEGI_32841 Sequoiadendron giganteum HOM05D005647 ORTHO05D006968 8.6e-34 147.9 135 51.1
Zm00001eb163100 Zea mays HOM05D005647 ORTHO05D006968 9.5e-33 144.4 213 40.4
AUR62009649 Chenopodium quinoa HOM05D005647 ORTHO05D006968 8.1e-32 141.4 99 67.7
Os12g0175900 Oryza sativa ssp. japonica HOM05D005647 ORTHO05D006968 1.2e-30 137.5 208 37.5
VMungo1127G1495 Vigna mungo HOM05D005647 ORTHO05D006968 1.4e-28 130.6 129 53.5
EL10Ac9g22529 Beta vulgaris HOM05D005647 ORTHO05D006968 1.5e-22 110.5 86 61.6
MBI14_g07932_MAGBIO Magnolia biondii HOM05D002922 ORTHO05D006968 1.9e-17 93.6 56 82.1
QL03p025644 Quercus lobata HOM05D005647 ORTHO05D006968 3.6e-16 89.4 59 72.9
Cre02.g088050 Chlamydomonas reinhardtii HOM05D005647 ORTHO05D006968 2.2e-13 80.1 113 34.5
MCO02G042 Micromonas commoda HOM05D005647 ORTHO05D006968 1.4e-07 60.8 100 32.0


User provided reference genes

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